Os01g0812050

From RiceWiki
Revision as of 05:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0812050| Description = Conserved hypothetical protein| Version = NM_001185687.1 GI:297720508 GeneID:9271632| Length = 6316 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0812050

Description

Conserved hypothetical protein

Version

NM_001185687.1 GI:297720508 GeneID:9271632

Length

6316 bp

Definition

Oryza sativa Japonica Group Os01g0812050, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36269964..36276279

Sequence Coding Region

36269964..36269983,36271968..36273802,36273851..36274186,36274388..36276279

Expression

GEO Profiles:Os01g0812050

Genome Context

<gbrowseImage1> name=NC_008394:36269964..36276279 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36269964..36276279 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgcaaggatcggccaggtttgtgctggaggctgaaagagtgcatgccatggcccttgatacaaaacaagttgcgcgatgtttgaagaaagttttgaagtcctccattaaagatggctatagatgtgtttctgaacatccaatccttttgacattgggtgttttgctctatttattgtatagatcttcaccagggttatttgctttcctactttcttcttctcctgtaattatgtgtactactcttcttcttggaatcctactgagttatggggaaacaaacctgcctgaggctgatgaagataacaagatcactccagagatttcatccttaaaggttggaaatccttccagtgattttcactttgaagcgagccagagattaccagtgcctgaattgagggaaaatacaactggcttcaaagagagggaaactaaacagacggtttttattagagagagggctagtgagcatattgagctggaagataatgtcccccttctgagaagggttgagcatgaatacgatagatttgatcggcatgaaatacctgcagcgttaacgccatttccctctatggtcaattttcatcaaggttctagagttggaaacgacttgagctctaatcaggacatcaactccaaaggtttgttgtccattaaggataaggctgatgggcacactagcttctttgaaggtgttcggagtggtctggatgagaaagaggcaccctttggcattttttcgaccagtaagaatgttaatggacgtggtgaattggaggaaaatttgaatcaagaaacagtatttacagattcaacagctagcagagtgagagatatttctgaagagaaaccaacggaaggggaagctggaactagcaaatcagcttgtgccatttccacgcatcagagtaaaacacttgatgaacttaggattaatactagcaagggttttgaggacaatctactcgattcctctcttggttcaccatgggcaagagttggtagtgaggacggagttggtagtgatgatggttcatctggttttgactctgatcaggctgagagttcttctcctgatgcttccatgactgacattgcacctattcttgatgagattgacccgctcttgggtgcaagctctactcatcctgatacaattccaaaggatgattcggacactgattcacatgtttcctcacaggatcatcaaactgatgatgatagtaatgatgaaactgacaataatgatgctaaagagaatggtgaggaaaagaataaagaacaaggaaaggaagctgcatttatttggacagcagatgatgaaaaaaatctgatggatcttggatattctgagatggaaagaaaccgcaggttggagcttttgatggccagacgaagatccaggaagaacataaggtttgaaatcgacaatgacttgataggtattgataataatgatggtgggaggggtgttgacgacttgtctcgcttccatgtacaagtaccacatatttcagttccaaggaggaatccgtttgatcttccttatgattcagaagaagcggcaattcctggctcagcaccctcagttctgcatacaaggaaaaacccattcgatcttcctcttgatcagtccaatgatggtgatgtttctgcagataataatgtaaatcctggagaattagtgaaagcttctcatcgtgacatgttcttccgaaggcacgatagcttcaacattggaaggacagatgctaccctggagagattttctagattcaagccatattttgtccccgagacagtggaagggagcttaagtaatttccaaagacagtttagtgataaaattgccgatcaggaggaccacaaggacctcgatgaaaaagatttgcccaatgagcatgggtctccagctctgcagagacaggatagcgaccttgcggatgttggaagtgaatgctcggatggcatcaactccgtggatgttgaattagacaacagtgacattgatgatcgtgagattgctctacaacactttgtctttgaaagatcacaggaaagagaagcatatctttcctcaacaaaaggaaagggtcctgaagatgattacctgctcagttcagttgggaactccaagacacttcatccagtagctgacctgtttagctgggaagatggaaatggtgaaagcagccttggtgttaactcttcccataacatgtcagttgaattctcggactgggtttcatcccccaagccaattgcagagcatgattcaggaccagagaaccttcaggagtttcttaatactgaagttgcatcaagttcaaagacaattgttctaggcgcaagaaatccagctgaaaataatggaaatgttgattccatatcctattcaaacaatgaaatgccttcagataacttgggtcatgggtccatggagttcccatctgaattttgtaatgaatcactgccagtaatatctagggacttgcaccctatccctgaagagagggttgtcgagaacttcaatgtgcaagaaaagcatgaagcagtaatatttaccgattcagatgctgccttgactgggtttcatgtaattgaggagcactttgaagttggatgtgatgtaagcccgagttctgaagttgttccgtcatgccttcaagcaagtgattccatccaatctcgattagttgagaataaagaggtatcaaatccattcatttccatcgcttctgaaaccaacaaggtggatatgattgatttgaaggaagaaacagctgcaggatatccacttgattctgatgatgatgctgataaaatctatcctgagcccatggaggacaatgtaattgatgaaagtttcctatcagaactggatgcggtaggagatttccgggtagaagcaacaagatcggaccagcagatgcctgatgttgactcccatattgataataacacttccaatggtgttgcagagagctccttgattagccctcagatttcaagtaacatattttcaaatatgaaatatgccagtatgctcgaacatgaggagaattctccattggttgatgacctaaatggcaccggtcctgaatttggttggtcattaggagcatcttatgatgaccctgagcagactgtctacaatccgaggcgacggattcttggagcaagtcgttttgaagaaactaacacagagatgaagccactatttgatgagacagaagcatcttttgtcaatgcaccaatagaagcaaacttggtagttggaccaagtaaagtggatgttgctaatgagtctgagttaactaaaactgatacaaacatgatcgttcttgatgccaattctctggaggatatagagacggcctttaaacaagcaagcaatggcgttgttgagtccaccgtggacaatgaaaccccacaggtttctggtgttgatattgacccagaatccatagagagttctgaacaattggatgtcattgatgcaaaatccgtcgacgacatatatgctgctttgaaggagcacacaactgctgctatgaacagttccttcgaagaaaacgaagacaagcatggatgcggtgatactgtaaaattcaccatgcatgatgagcttccagaaggaacacatattgaaggtaacacagttggagatggtaaagagcctgaaccaatggggattacaagcagcatggatgtcattgatgcaaaatccatcgatgacatatatgctgctttgaagaagcagtcaagtgctgctgcgaatagttccttcgaacaaaacgaaggcaagaacggatgtggtgatactgtaacattcaccacgcacgatgagcttccggaaggaacacacattgaagatagggataatacagttgaagatggtaaagagcctgaaccgattgggactacaagcagcatggacactattgaggtgaaaacaattgatgacatagacgcagtgttcaagaagctctctgatggcggtaccaagagtgctgcccaggcagtggattgcgagaatacttgtgaagcaagtgatgaaagtgaacagcactga</cdnaseq>

Protein Sequence

<aaseq>MTQGSARFVLEAERVHAMALDTKQVARCLKKVLKSSIKDGYRCV SEHPILLTLGVLLYLLYRSSPGLFAFLLSSSPVIMCTTLLLGILLSYGETNLPEADED NKITPEISSLKVGNPSSDFHFEASQRLPVPELRENTTGFKERETKQTVFIRERASEHI ELEDNVPLLRRVEHEYDRFDRHEIPAALTPFPSMVNFHQGSRVGNDLSSNQDINSKGL LSIKDKADGHTSFFEGVRSGLDEKEAPFGIFSTSKNVNGRGELEENLNQETVFTDSTA SRVRDISEEKPTEGEAGTSKSACAISTHQSKTLDELRINTSKGFEDNLLDSSLGSPWA RVGSEDGVGSDDGSSGFDSDQAESSSPDASMTDIAPILDEIDPLLGASSTHPDTIPKD DSDTDSHVSSQDHQTDDDSNDETDNNDAKENGEEKNKEQGKEAAFIWTADDEKNLMDL GYSEMERNRRLELLMARRRSRKNIRFEIDNDLIGIDNNDGGRGVDDLSRFHVQVPHIS VPRRNPFDLPYDSEEAAIPGSAPSVLHTRKNPFDLPLDQSNDGDVSADNNVNPGELVK ASHRDMFFRRHDSFNIGRTDATLERFSRFKPYFVPETVEGSLSNFQRQFSDKIADQED HKDLDEKDLPNEHGSPALQRQDSDLADVGSECSDGINSVDVELDNSDIDDREIALQHF VFERSQEREAYLSSTKGKGPEDDYLLSSVGNSKTLHPVADLFSWEDGNGESSLGVNSS HNMSVEFSDWVSSPKPIAEHDSGPENLQEFLNTEVASSSKTIVLGARNPAENNGNVDS ISYSNNEMPSDNLGHGSMEFPSEFCNESLPVISRDLHPIPEERVVENFNVQEKHEAVI FTDSDAALTGFHVIEEHFEVGCDVSPSSEVVPSCLQASDSIQSRLVENKEVSNPFISI ASETNKVDMIDLKEETAAGYPLDSDDDADKIYPEPMEDNVIDESFLSELDAVGDFRVE ATRSDQQMPDVDSHIDNNTSNGVAESSLISPQISSNIFSNMKYASMLEHEENSPLVDD LNGTGPEFGWSLGASYDDPEQTVYNPRRRILGASRFEETNTEMKPLFDETEASFVNAP IEANLVVGPSKVDVANESELTKTDTNMIVLDANSLEDIETAFKQASNGVVESTVDNET PQVSGVDIDPESIESSEQLDVIDAKSVDDIYAALKEHTTAAMNSSFEENEDKHGCGDT VKFTMHDELPEGTHIEGNTVGDGKEPEPMGITSSMDVIDAKSIDDIYAALKKQSSAAA NSSFEQNEGKNGCGDTVTFTTHDELPEGTHIEDRDNTVEDGKEPEPIGTTSSMDTIEV KTIDDIDAVFKKLSDGGTKSAAQAVDCENTCEASDESEQH</aaseq>

Gene Sequence

<dnaseqindica>1..20#2005..3839#3888..4223#4425..6316#atgacgcaaggatcggccaggtgtcaggccatacagagataggagttgtgatactgcaacaggtaaactttttatttttgataactcataaatttatcgtcaacaaagttcaaggggaactactgcagcaatttacgcatgaaactagtacagagataggtcgtccgttttttttttaaggcggagggagtactaggtggtgttcttttcttctgtatgtaaagataaaaattaattttttttacataaaataagatggtattaacatataattgaatgagttttaattattacaaacttgaaaaatactttcaagttttcacaggaaacgcgtcgtttaacagtttgaaaagcgtgccataaaaatcttaatatttattcaactcttgttagagaagagaacatgaccctagtaatgatcaacaatataactctccgtcgtggcagtaaaaaattctcacggtgagaccacgtgcagtaataatactcctcctccatcttataatataggagattttggatgaatggtgagaccacatgcaataataatactactcctccatattaatataggagattttagatgaatataatacattatagtataataaatctaaataaatactaaaatttcttatattatcggatggagagagcagtaataatcgcggtaatctggacgtgggaagcaaagacgcaggcagcaatcacggcgtgccggcgaccccctcggacaccccggaggagcagcctgacaacatgccagcccaccattctcaccgctgtcgttaccctccccggctcccgcgaagccccgggacccaccgccccaaaagcacaccgctgggcccacctgtcagccgccgcccaccaccaccacggtcagacgcgggaggaggacaactgttgccatatgccagcgaaaggctgaaaaagccggcagcttcttccgctttccgccgccgccgctttcctctcctctcctctccgcgatcgccatcgccatcgccgcccaccgcccccagccaggcaccgcagcaaaccaaaccaagccgcatcctcctcctttccaccgccgccgaaagtggcggcagcccaaacctgtactactactactactactactactactactactaccattccactgcatacgacactgatttgaccccgtgggggacgaggcgaggcgaggccttcttgctctgcctttctttttctcctcctcctcgcctgatcagccaagattttcggcggttttgtttcttctgctccttggagctttccccgatctcgcttgctggtgctggtgctgctgcctgacggcgaaggtatgttgttttgcgatgccgtcgtagtgaaccgagaggctctgtagctgtagcggatgggatcgagttgccacttctgggatgcgttgaattttgttgcttttcccgatcaattggtcgaactgggggaagatctgcctgccccttgcttgatcggcagtaaaggtggtggtagtggtggtgttgtgggtgttcttgctagatggttttgctgggatcagattttgcccctactctgatattggagtagtttatcagcttatgggggttcgaatcggaggctttagggatggattttggtgtgggcgagggctggattcttttgtgccttgagaagttctcagctaattgaattgatgaacaaagaattggttattgacttgccttgcatagtattcttatgctaagacactcctaacctaatgcaattatagttctctaatggatctgtttgtgcggttagtatgtcgtgaagtcgcgcaattggatttgcctgatccgttgtagttgtactagaactatctgcattagttcagatgcctaaaaatttgtgtaattaggatggttagatttacttaacaaaggttctcaaaattctttatatgtataaattaatcaaattctgtcacctttcttactgtaactaatcttgcttgtgattttcttattctaggtttgtgctggaggctgaaagagtgcatgccatggcccttgatacaaaacaagttgcgcgatgtttgaagaaagttttgaagtcctccattaaagatggctatagatgtgtttctgaacatccaatccttttgacattgggtgttttgctctatttattgtatagatcttcaccagggttatttgctttcctactttcttcttctcctgtaattatgtgtactactcttcttcttggaatcctactgagttatggggaaacaaacctgcctgaggctgatgaagataacaagatcactccagagatttcatccttaaaggttggaaatccttccagtgattttcactttgaagcgagccagagattaccagtgcctgaattgagggaaaatacaactggcttcaaagagagggaaactaaacagacggtttttattagagagagggctagtgagcatattgagctggaagataatgtcccccttctgagaagggttgagcatgaatacgatagatttgatcggcatgaaatacctgcagcgttaacgccatttccctctatggtcaattttcatcaaggttctagagttggaaacgacttgagctctaatcaggacatcaactccaaaggtttgttgtccattaaggataaggctgatgggcacactagcttctttgaaggtgttcggagtggtctggatgagaaagaggcaccctttggcattttttcgaccagtaagaatgttaatggacgtggtgaattggaggaaaatttgaatcaagaaacagtatttacagattcaacagctagcagagtgagagatatttctgaagagaaaccaacggaaggggaagctggaactagcaaatcagcttgtgccatttccacgcatcagagtaaaacacttgatgaacttaggattaatactagcaagggttttgaggacaatctactcgattcctctcttggttcaccatgggcaagagttggtagtgaggacggagttggtagtgatgatggttcatctggttttgactctgatcaggctgagagttcttctcctgatgcttccatgactgacattgcacctattcttgatgagattgacccgctcttgggtgcaagctctactcatcctgatacaattccaaaggatgattcggacactgattcacatgtttcctcacaggatcatcaaactgatgatgatagtaatgatgaaactgacaataatgatgctaaagagaatggtgaggaaaagaataaagaacaaggaaaggaagctgcatttatttggacagcagatgatgaaaaaaatctgatggatcttggatattctgagatggaaagaaaccgcaggttggagcttttgatggccagacgaagatccaggaagaacataaggtttgaaatcgacaatgacttgataggtattgataataatgatggtgggaggggtgttgacgacttgtctcgcttccatgtacaagtaccacatatttcagttccaaggaggaatccgtttgatcttccttatgattcagaagaagcggcaattcctggctcagcaccctcagttctgcatacaaggaaaaacccattcgatcttcctcttgatcagtccaatgatggtgatgtttctgcagataataatgtaaatcctggagaattagtgaaagcttctcatcgtgacatgttcttccgaaggcacgatagcttcaacattggaaggacagatgctaccctggagagattttctagattcaagccatattttgtccccgagacagtggaagggagcttaagtaatttccaaagacagtttagtgataaaagtgagtctaaattgagttctgttactgaatctgatttggcctcttcagttgccgatcaggaggaccacaaggacctcgatgaaaaagatttgcccaatgagcatgggtctccagctctgcagagacaggatagcgaccttgcggatgttggaagtgaatgctcggatggcatcaactccgtggatgttgaattagacaacagtgacattgatgatcgtgagattgctctacaacactttgtctttgaaagatcacaggaaagagaagcatatctttcctcaacaaaaggaaagggtcctgaagatgattacctgctcagttcagttgggaactccaagacacttcatccagtagctgacctgtttagctgggaagatggaaatggtaagaaaatctgacctcacagttaaacaactgaatatgtacttgacagctttatttgaatcatatttcttcagctatgtgatgttattttgtaatttcagctttatgctgaaacattttaataatggcatggctatgtccatctcatgatgtagagtcaggagttctcttcaattatctaaaaactaccttcttgtgcaggtgaaagcagccttggtgttaactcttcccataacatgtcagttgaattctcggactgggtttcatcccccaagccaattgcagagcatgattcaggaccagagaaccttcaggagtttcttaatactgaagttgcatcaagttcaaagacaattgttctaggcgcaagaaatccagctgaaaataatggaaatgttgattccatatcctattcaaacaatgaaatgccttcagataacttgggtcatgggtccatggagttcccatctgaattttgtaatgaatcactgccagtaatatctagggacttgcaccctatccctgaagagagggttgtcgagaacttcaatgtgcaagaaaagcatgaagcagtaatatttaccgattcagatgctgccttgactgggtttcatgtaattgaggagcactttgaagttggatgtgatgtaagcccgagttctgaagttgttccgtcatgccttcaagcaagtgattccatccaatctcgattagttgagaataaagaggtatcaaatccattcatttccatcgcttctgaaaccaacaaggtggatatgattgatttgaaggaagaaacagctgcaggatatccacttgattctgatgatgatgctgataaaatctatcctgagcccatggaggacaatgtaattgatgaaagtttcctatcagaactggatgcggtaggagatttccgggtagaagcaacaagatcggaccagcagatgcctgatgttgactcccatattgataataacacttccaatggtgttgcagagagctccttgattagccctcagatttcaagtaacatattttcaaatatgaaatatgccagtatgctcgaacatgaggagaattctccattggttgatgacctaaatggcaccggtcctgaatttggttggtcattaggagcatcttatgatgaccctgagcagactgtctacaatccgaggcgacggattcttggagcaagtcgttttgaagaaactaacacagagatgaagccactatttgatgagacagaagcatcttttgtcaatgcaccaatagaagcaaacttggtagttggaccaagtaaagtggatgttgctaatgagtctgagttaactaaaactgatacaaacatgatcgttcttgatgccaattctctggaggatatagagacggcctttaaacaagcaagcaatggcgttgttgagtccaccgtggacaatgaaaccccacaggtttctggtgttgatattgacccagaatccatagagagttctgaacaattggatgtcattgatgcaaaatccgtcgacgacatatatgctgctttgaaggagcacacaactgctgctatgaacagttccttcgaagaaaacgaagacaagcatggatgcggtgatactgtaaaattcaccatgcatgatgagcttccagaaggaacacatattgaaggtaacacagttggagatggtaaagagcctgaaccaatggggattacaagcagcatggatgtcattgatgcaaaatccatcgatgacatatatgctgctttgaagaagcagtcaagtgctgctgcgaatagttccttcgaacaaaacgaaggcaagaacggatgtggtgatactgtaacattcaccacgcacgatgagcttccggaaggaacacacattgaagatagggataatacagttgaagatggtaaagagcctgaaccgattgggactacaagcagcatggacactattgaggtgaaaacaattgatgacatagacgcagtgttcaagaagctctctgatggcggtaccaagagtgctgcccaggcagtggattgcgagaatacttgtgaagcaagtgatgaaagtgaacagcactga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0812050, RefSeq:Os01g0812050