Os01g0813800

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Revision as of 05:07, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0813800| Description = Glycoside hydrolase, family 1 protein| Version = NM_001051136.1 GI:115440642 GeneID:4327593| Length = 5462 bp| Defi...")
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Gene Name

Os01g0813800

Description

Glycoside hydrolase, family 1 protein

Version

NM_001051136.1 GI:115440642 GeneID:4327593

Length

5462 bp

Definition

Oryza sativa Japonica Group Os01g0813800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36361441..36366902

Sequence Coding Region

36363031..36363068,36363356..36363570,36363803..36363918,36364548..36364806,36364930..36365000

Expression

GEO Profiles:Os01g0813800

Genome Context

<gbrowseImage1> name=NC_008394:36361441..36366902 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36361441..36366902 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctttaccatctggatctcccgcaagctttggaagatgagtatgctggatggttaagccctagaattgtggaggattttactgcttatgcggatgtgtgcttcagggaatttggtgatagagtttcgcactggactattttggctgaacctaatgtcgctgcacttggaggttatgacacaggagaattcgctccaggacgttgctctgatccttttggagtgaccaaatgtacagtggggaattccagtgtggaaccatatgtagcagctcacaatatgatactaacacatgcagctgttgttagactgtacagagaaaaatatcaaactctgcaaaaggggattgttggtataaacgttctttccttgtggagttatccattaacagactccactgcggatctgcaagcagctcaaagatacaaggatttcacgtacggatggatactgcacccattggtatttggagattacccacaagtaatgaagaaagctatcggttctcgtcttccatccttcagcaaagtccaaactgaactagtcaagggtactctagatttcattggagtaaatcactacttttctctctatgtgagcgatctccctttggcaaaaggagttcgagacttcattgctgatcgatcagtaagctgcagagcttctaaaacggatccatcgtcggggcaggtaagttaa</cdnaseq>

Protein Sequence

<aaseq>MLYHLDLPQALEDEYAGWLSPRIVEDFTAYADVCFREFGDRVSH WTILAEPNVAALGGYDTGEFAPGRCSDPFGVTKCTVGNSSVEPYVAAHNMILTHAAVV RLYREKYQTLQKGIVGINVLSLWSYPLTDSTADLQAAQRYKDFTYGWILHPLVFGDYP QVMKKAIGSRLPSFSKVQTELVKGTLDFIGVNHYFSLYVSDLPLAKGVRDFIADRSVS CRASKTDPSSGQVS</aaseq>

Gene Sequence

<dnaseqindica>3835..3872#3333..3547#2985..3100#2097..2355#1903..1973#ggatttctctgcacaaaaacacaatccagttcgaaccaaccaaccagcagccctgcccctgcttctcttctttctcttgcccatggccgctgctgctgccttcttctgcgccctgctgttcatctccgtgcagcacggcgttctcggtggctacacgaggaatgatttccctgctgatttcgtctttggagccgccacctcggcgtaccaggtaacggctatgattctatctcaactgaatttttgctttgctcggttggttttctgcgagctttgagtttttttcgctgtgccttttgttgtgcatgcggcagtatgagggcgctgccgcagaggatggcaggggcgctagcatctgggacacgttcactcatgcaggtcagtcgtttttgctccctggaagctgaagtgctgaacacagtcacacgcgcgggcgtgggacactgttgttgttcatcatcttttcatggctgcttcatgctcatacacaaatacacaatcgagctaaccaggatcacgtaccattctaaaagcaaatgctgaaaaataaacttcaacgaaaaaaccccaaaatcaacttcaaatttaaggatgaaaattcaaattttggctgataagcataaataaatagtggcactaaaactgaatagtgacagtattttcatatgtgcaatcagggaaaatgaaggacaaaagtacaggcgatgttgcctcagatgggtaccacaaatacaaggtacacgatttaatttcttaggtggagtagaagctaggtttgacttcggaagattgcccttttatatattttccttgtcttgcttacatgtgaatgagtctcgccattgtagcaaaatgttgtgtttttgcaatatttttcctgaagaaggaactaaacataggaacaaggttcctcgagttccactttgaatgtttcacctttttcttctttctggtagaacttaaggttgtgtttagttcacaccaaatttggaaatttggttaaaattggaacgatgtgacagaaaatttagaagtttgtgtgtgtaggaaagttttgatgtgatggaaaagttggaagtttgaagaaaaattttacaactaaacacagcctaagttgagaactttggcttgtaataattttgcttgcctgattttttagggtgatgtcaagctcatgactgaaactggcctagaggcatataggttttccatctcctggtcaaggcttatcccaagtacagccatttctactcaaaatttaactcttgttaacaaagaagtagttccttgttgcttagttgtgatatgcaggtggaaggggagctgtcaaccaacaggggctcaagtactacaataacattatagatgagctaacaaaacgaggtaatttttgcaaattctttttcaggttacttatattacagagcattacatgttgtattgataaaacataattgtgtttaaacaatgaactatattagcaagcacaaaaaagaaagaagaagaaaaaagaggttgctcgagcaaaacctgcactaggacgaacttcgtttccttgacagttttatggatggattcagtcagccgcactccttccttttgaaaagtgacgctttgcgtcttcggcattaaattgtgaagcgttgccctgccataatgtgatgtgtttccactttccaatgccaataaaaagtagcccgtctaatggtatttaacatccataaaacatccaaataaaatgcgtcccaagtagaaatatcacaagtactgccacgacctgggccggtgctccagcttgcttggtgaacactgacttactaaagaccggaatcgaccaatgtgacattgactatctcatgaatattgattgctcggctttcttcaggaattcaagtccatgtcatgctttaccatctggatctcccgcaagctttggaagatgagtatgctggatggttaagccctagaattgtgtaagattcaggaaccatctatatatatatatgactatactggtagtgattatacttgaagcttacaactagttggagtagatcaattctggactgctgatcagtaacaatggcacaatgcagggaggattttactgcttatgcggatgtgtgcttcagggaatttggtgatagagtttcgcactggactattttggctgaacctaatgtcgctgcacttggaggttatgacacaggagaattcgctccaggacgttgctctgatccttttggagtgaccaaatgtacagtggggaattccagtgtggaaccatatgtagcagctcacaatatgatactaacacatgcagctgttgttagactgtacagagaaaaatatcaagtaagtaataatgtgcttaaaattatcggtagtgtgtatttctaaccgcacttatattctccgcaatcaataccaaggctcagttccattcttcaactccaaacttcaacttcctcgtttttcgttagcatgcttttcaaattgttaaattgtgcattattggccaatcttctggtaagccaatcctagaagttaagggagaatctaggatttgttagggttagtgcgttatttttttttaaaaaaaatctatatagaagttgttaaaaaaccatataaatccattttttaaatttataatagtcaatacttaattaatcatgtgctaacgaggtttctcgttttgcgtgccataaaaatccatcttcaaaactggagatcgaacggggcctaagacactaagcaagtatgctatcaatacgatttttagtgaggtcagatatttgcctctagtgtgagcttttcaaagggccgcatttgtgagagtatgtgtgtgttttaagtcattaagtgcaatcctaaaaaagttgaaaggatttattttattattcctcttattttcttattttcttcctattattcctcttatctaaatttctcaaagtgttttgcaactttctttcatgtagactctgcaaaaggggattgttggtataaacgttctttccttgtggagttatccattaacagactccactgcggatctgcaagcagctcaaagatacaaggatttcacgtacggatggtatgatcgatgttgtaactctttatcttcacactgaactagcggactgcacaattttacacgaagctagattttctctcttttttttcccaagttaacgtagcaatttctagaaatgaacctagtggttccttttagctccctctttgtaatggatactagatatttgacatagacatgaatataagctcaccgttgaacttagaggataaacaactactcttgtttgtaggatactgcacccattggtatttggagattacccacaagtaatgaagaaagctatcggttctcgtcttccatccttcagcaaagtccaaactgaactagtcaagggtactctagatttcattggagtaaatcactacttttctctctatgtgagcgatctccctttggcaaaaggagttcgagacttcattgctgatcgatcagtaagctgcagaggttggccagttttctatttaattatgcacataaatttgtagcctaggagtgtgtagcttgattcctttatagggacggcccatgaagatgaaggtagacaaaagaaaataaatcaaaacaaaatgataatgcacgtcatatcttttatgatgtgatgatagattatctttttcatatatgctgaataactttgtaaagtcatccaatgatgattctgaagatgattctacaagttattagatgtactgtatagcttatcatttgtttctcggtgttttcttatgcagcttctaaaacggatccatcgtcggggcaggtaagttaatttggtcatcagtaaggttattgagatacattgttgccttttgactttaggttaaggtttattgcaaggggtaaggtttatgataaacaggaaaggtggtaggttaaggtttattgcaaggggtaaggtttattgcacaaacaatggtggcgtcacattctaggagaagatgctacataggatttttctttttgtgacgtggaaaagatatagaagtatgccgtctgttgattaagtctaatatacggcttaatgctatatatatatatttttaaaagagggcaaaaactttgcctcgtatatatggatagaatagggtgaaaaaaatacagattgatatttacatggcttcatcaaaacgaggccagagattaatgctatataattattatacatgtcatctatagggtgaaataattgattatacagatctattatagaaaactaaacatcattgtatcggttgtatatatatgtcatctaaatctgacatgaaaaaaattagacagtaacggtctaaaaccactatttatgctcttatccattattcttttaaagataaagcgagggacaaaaataaagtaaattcgaatatcattactaagacactcttggaattatgtggttcgtcctgttggcagtgactcatcactcatatatctcctctctttattggctgcagcaagccccaacgcggtctatgggtgatccacacggattacaactaatgctacagcacctgaaagagtcctatggtgacttgccaatttatgtccaggagaatggaaagtacagtttctgtttcccgtagagtaatcagaacgagcagcacatactgtttctcacttagttttatggagtcaattcatcctagtagatcacctgctaattaagaatctcttgactaatgaataattcgctgtgagcaagtttgctgccttcaaggttaaagctcgatctccttcctgttttttcagggaaggcatctagcaatgacagtctcgacgacactgacagggtggattacataaagggctacatagagggcgtcctgaatgcgaccaggtgatccaaaactcagagcccaaaaccacatgaaaattaaaatttcagacgccggatggttcagctcaaatgctcaatccaccatcttgattcttgaataagacctattgtctgatgatacatgttctgattgattttgctttgctgtgcgtgcatatgcaggaacggggttaatgcgagaggctacttcgcttggttcttcgtggacatgttcgagctcttgtccggataccagacgcgatacggcctctaccgcgtggatttcgacgacgcggcgctgccgcggcgagcgaagcgttctgctcgctggtaccgtgacttcctcaagagcaagcggcaaccgctgcagattgctcagcagtgaggtttcacgcaacggtctcgctgtcgctgcgatctttgaggaggatgcactagtggtggcaaggggatatggttttaattatgaggtcttgtgtttaatcgtcaacacgtttataatttctttttaaaagttgtttggagaaacgtctccctccaaatctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0813800, RefSeq:Os01g0813800