Os01g0821900

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Revision as of 05:07, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0821900| Description = Protein kinase-like domain containing protein| Version = NM_001051186.1 GI:115440742 GeneID:4327614| Length = 2991 b...")
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Gene Name

Os01g0821900

Description

Protein kinase-like domain containing protein

Version

NM_001051186.1 GI:115440742 GeneID:4327614

Length

2991 bp

Definition

Oryza sativa Japonica Group Os01g0821900, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36837931..36840921

Sequence Coding Region

36838120..36839581,36840054..36840919

Expression

GEO Profiles:Os01g0821900

Genome Context

<gbrowseImage1> name=NC_008394:36837931..36840921 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36837931..36840921 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tccctcaacctctcctccaaccgcctcgctggccccatccctgatggcctctggtcgttgccttcgctccggtcgcttgacctctcgggcaacgagctctccgggagtgtccccggaggcttccccgggagcagctcgttgcgggcggtggacttgagccggaaccttctcgccggggagataccggcggacgtcggggaggcggcgctcctcaagtcgctggatgtcgggcacaatctcttcaccggcgggttgccggagtcgctgcgtcggctgtccgcgctgcggttcctcggcgtcggcggcaatgcgctcgccggggaggtgccgtcgtggatcggggagatgtgggcgctggagcggctggacttgtccgggaaccgcttctcgggcgccatccctgacgccatcgcgaaatgcaagaagatggtggaggcggacctcagccggaacgcgctcgccggcgagctcccctggtgggtgttcggcctgccgctgcagcgcgtctcggtcgctgggaacaagttgtacgggtgggtcaaggtgccggcggatgccgcgctggcgctgcgcgcgctggacctgtcgagcaacgggttctccggcgggatcccgccgcagatcaccgcttttgcgggtttgcagtatctcaacatgtcctcgaattccttcgcgaggcagctgcccgccggcattggcgggatgaggctgctcgaggtgctcgatgtgagcgccaaccgtctcgacggcggcgtgcccccggagattggcggcgcagtggcgctccgggagctgcggctggggcggaattcattcaccggccacatcccgtcgcagattgggaattgcagttcccttgttgcattggatttgtcacacaataatctcacagggtcaatccctagcaccgtaggcaatctgaccagtcttgaggtggttgatctatcaaagaacaagctgaatgggaccttaccagtggagctatctaatctgcccagcttgcgcatctttgatgtctcccacaacttactatcaggggacctcccaaatagtcgtttcttcgacaacatccctgaaaccttcttgtctgacaatcagggcctctgcagctcgcggaagaacaactcctgcattgctatcatgccaaagcccatagtgctcaatcccaactcctcgacaaacccattgtcgcaggccacaccgactgcccctagcagcatgcaccacaagaagatcatattaagtgtttccaccctcattgccattgcaggtggtggtaccattattatcggggtgatcatcatatctgttctcaaccgtcgtgcccgtgccaccacctctcggtcagctcctgctactgcattatctgatgactatcttagccaatccccagagaatgatgctagctcagggaagcttgttatgtttggaaaaggcagcccagagttcagcgctggtgggcatgccttgttgaataaggattgtgagcttggtcgaggaggttttggtgcagtctacaagacagtgctgagagatggccaaccggtggccatcaagaagctcaccgtttctagcttggtcaagtcgaaggatgactttgagagacaggtgaagttgctcagcaaagtgcgacaccacaatgtcgtcgcactaagaggcttctactggacttcgtcgctgcagctcctcatctatgattacctgcccggaggaaatttgcacaaacacctccatgagtgcacggaggacaactcgctctcttggatggaaaggtttgacattatccttggagttgctaggggtctgacacatctgcaccagcgtgggatcatccattacaatctcaagtccagcaatgttctgctggacagcaatggtgaacccagggtaggtgactatggtcttgccaagctgttgccgatgctggaccggtatgtgctgagcagtaagatccagagtgcactggggtacatggcaccagaatttgcttgcaagactgtgaagattaccgagaagtgcgacgtgtatggctttggagtgctcgtgctggaggtcttgacgggcaggaggccggttgagtacttggaagatgatgtagttgtgctatgtgatttggtgagaagcgcactggaggaaggtaggctggaggactgcatggatcccaggttatgtggtgaattccccatggaagaggccttgccaatcatcaagctgggccttgtttgcacctcgcgggttccatcgaaccggccagacatgggcgaagtggtgaacattcttgagctggtgaggagtcctcaggatagtctagaggacgagctggtttaa</cdnaseq>

Protein Sequence

<aaseq>SLNLSSNRLAGPIPDGLWSLPSLRSLDLSGNELSGSVPGGFPGS SSLRAVDLSRNLLAGEIPADVGEAALLKSLDVGHNLFTGGLPESLRRLSALRFLGVGG NALAGEVPSWIGEMWALERLDLSGNRFSGAIPDAIAKCKKMVEADLSRNALAGELPWW VFGLPLQRVSVAGNKLYGWVKVPADAALALRALDLSSNGFSGGIPPQITAFAGLQYLN MSSNSFARQLPAGIGGMRLLEVLDVSANRLDGGVPPEIGGAVALRELRLGRNSFTGHI PSQIGNCSSLVALDLSHNNLTGSIPSTVGNLTSLEVVDLSKNKLNGTLPVELSNLPSL RIFDVSHNLLSGDLPNSRFFDNIPETFLSDNQGLCSSRKNNSCIAIMPKPIVLNPNSS TNPLSQATPTAPSSMHHKKIILSVSTLIAIAGGGTIIIGVIIISVLNRRARATTSRSA PATALSDDYLSQSPENDASSGKLVMFGKGSPEFSAGGHALLNKDCELGRGGFGAVYKT VLRDGQPVAIKKLTVSSLVKSKDDFERQVKLLSKVRHHNVVALRGFYWTSSLQLLIYD YLPGGNLHKHLHECTEDNSLSWMERFDIILGVARGLTHLHQRGIIHYNLKSSNVLLDS NGEPRVGDYGLAKLLPMLDRYVLSSKIQSALGYMAPEFACKTVKITEKCDVYGFGVLV LEVLTGRRPVEYLEDDVVVLCDLVRSALEEGRLEDCMDPRLCGEFPMEEALPIIKLGL VCTSRVPSNRPDMGEVVNILELVRSPQDSLEDELV</aaseq>

Gene Sequence

<dnaseqindica>1341..2802#3..868#tgtccctcaacctctcctccaaccgcctcgctggccccatccctgatggcctctggtcgttgccttcgctccggtcgcttgacctctcgggcaacgagctctccgggagtgtccccggaggcttccccgggagcagctcgttgcgggcggtggacttgagccggaaccttctcgccggggagataccggcggacgtcggggaggcggcgctcctcaagtcgctggatgtcgggcacaatctcttcaccggcgggttgccggagtcgctgcgtcggctgtccgcgctgcggttcctcggcgtcggcggcaatgcgctcgccggggaggtgccgtcgtggatcggggagatgtgggcgctggagcggctggacttgtccgggaaccgcttctcgggcgccatccctgacgccatcgcgaaatgcaagaagatggtggaggcggacctcagccggaacgcgctcgccggcgagctcccctggtgggtgttcggcctgccgctgcagcgcgtctcggtcgctgggaacaagttgtacgggtgggtcaaggtgccggcggatgccgcgctggcgctgcgcgcgctggacctgtcgagcaacgggttctccggcgggatcccgccgcagatcaccgcttttgcgggtttgcagtatctcaacatgtcctcgaattccttcgcgaggcagctgcccgccggcattggcgggatgaggctgctcgaggtgctcgatgtgagcgccaaccgtctcgacggcggcgtgcccccggagattggcggcgcagtggcgctccgggagctgcggctggggcggaattcattcaccggccacatcccgtcgcagattgggaattgcagttcccttgttgcattgtgagttctttttactcctacttcttttagcatgtattttttattgaattaaatcaaattcgacgtcattgcggttgcttgttagtgaggttgactagttctatttgttttttgtattatttcctgcatgctttgttggctttcagtttcgtaggttgtgcagagacgttgtagaaagtgataggagacaagagatcctgatgtcttattttctgtttggacccccaaaccgcaaaatatgggtctgtgtcatgttttttgctcgtatcccagtgtaacctgggccctcattttcttcgatacactcaaaactgaagtcaaatgtacatgaataggatcttgagcatttgcttcaatatagtattaaactgatcaattcgatcaaaccgtcatattatttggttacggcgatttaacattatgaaccattttaagtttttaaccaagacaatgttttgctcttgaaatgcagggatttgtcacacaataatctcacagggtcaatccctagcaccgtaggcaatctgaccagtcttgaggtggttgatctatcaaagaacaagctgaatgggaccttaccagtggagctatctaatctgcccagcttgcgcatctttgatgtctcccacaacttactatcaggggacctcccaaatagtcgtttcttcgacaacatccctgaaaccttcttgtctgacaatcagggcctctgcagctcgcggaagaacaactcctgcattgctatcatgccaaagcccatagtgctcaatcccaactcctcgacaaacccattgtcgcaggccacaccgactgcccctagcagcatgcaccacaagaagatcatattaagtgtttccaccctcattgccattgcaggtggtggtaccattattatcggggtgatcatcatatctgttctcaaccgtcgtgcccgtgccaccacctctcggtcagctcctgctactgcattatctgatgactatcttagccaatccccagagaatgatgctagctcagggaagcttgttatgtttggaaaaggcagcccagagttcagcgctggtgggcatgccttgttgaataaggattgtgagcttggtcgaggaggttttggtgcagtctacaagacagtgctgagagatggccaaccggtggccatcaagaagctcaccgtttctagcttggtcaagtcgaaggatgactttgagagacaggtgaagttgctcagcaaagtgcgacaccacaatgtcgtcgcactaagaggcttctactggacttcgtcgctgcagctcctcatctatgattacctgcccggaggaaatttgcacaaacacctccatgagtgcacggaggacaactcgctctcttggatggaaaggtttgacattatccttggagttgctaggggtctgacacatctgcaccagcgtgggatcatccattacaatctcaagtccagcaatgttctgctggacagcaatggtgaacccagggtaggtgactatggtcttgccaagctgttgccgatgctggaccggtatgtgctgagcagtaagatccagagtgcactggggtacatggcaccagaatttgcttgcaagactgtgaagattaccgagaagtgcgacgtgtatggctttggagtgctcgtgctggaggtcttgacgggcaggaggccggttgagtacttggaagatgatgtagttgtgctatgtgatttggtgagaagcgcactggaggaaggtaggctggaggactgcatggatcccaggttatgtggtgaattccccatggaagaggccttgccaatcatcaagctgggccttgtttgcacctcgcgggttccatcgaaccggccagacatgggcgaagtggtgaacattcttgagctggtgaggagtcctcaggatagtctagaggacgagctggtttaatgtctcttgccaactctgttctgaacggttctaggcgtttttttttcctttttgttttaatgagatgcatatagtgtaatgctaggtgggaagaaatcagagaaagcaaagagtggtatggatcgtgaaatgcttgtagtttgcttgaagttttagggaggttgcaaggctattttgttgcttctcggc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0821900, RefSeq:Os01g0821900

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