Os01g0826900

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Revision as of 05:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0826900| Description = Protein of unknown function DUF399 family protein| Version = NM_001051212.1 GI:115440794 GeneID:4327520| Length = 48...")
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Gene Name

Os01g0826900

Description

Protein of unknown function DUF399 family protein

Version

NM_001051212.1 GI:115440794 GeneID:4327520

Length

4841 bp

Definition

Oryza sativa Japonica Group Os01g0826900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37142611..37147451

Sequence Coding Region

37142926..37143084,37143788..37143910,37144109..37144654,37144873..37144980,37145283..37145813
,37146202..37146331,37146813..37147387

Expression

GEO Profiles:Os01g0826900

Genome Context

<gbrowseImage1> name=NC_008394:37142611..37147451 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37142611..37147451 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgccccccgcgcccacccgaaacccgggagcctgcaggttcatacccctcctcccaccaaaaccgcttctctctcccgccgccgccgccgcctcctcccgcggtggcctctgcgtcgccgccgcatcccgccgcgatttcctcctcctagtcccctccatcgccgcggcctccaccgtgctccagtccctcccgctatccgcctccgccgcggacgatgagaagcaggccgcgtcgcccgcgccgggccctgcagcggctccggctccaacctccgcgggagagcccgaggcggaggcgctgtcgagggtgtacgacgcgacggtcatcggggagccgcaggccgtggggaaggacgcgcggcggagggtgtgggagaagctgatggccgcgcgggtggtgtacctcggcgaggccgagctcgtgcccgaccgcgacgacagggtgctcgagctcgaggtcgtgaggaagctggcggcacggtgcgccgaggccggaaggagcatctcgcttgcgctcgaagccttcccgtgcaacctccaggagcagctcaaccagttcatggacaggagaattgatggcaacaacttaaggttgtacacttctcactgggcaccagagcgctggcaggagtatgaaccccttttgaactactgtcgtgataatggagtcaaacttgttgcctgtggaactccacttgaggtgtcaagaactgtccaagcagaaggaattagaggcctttcaaaagcacaaagaaagctgtacgctcctccagctggctcaggcttcatttctggttttacatccatctcaggccgatcattgatagacaagatttcagcaattcatggctctccatttggcccaagctcgtacctatctgcacaggcaagagtagttgatgactataccatgtcccaaaaaataatgaaagaaattactaatggatatccttcagggatgcttgttgttgtaactggttcaagccatgttatatatggttcacgtggaattggagtccctgctagaatatctaaaaagatgcaaaagaagaaacaagttgtagtacttcttaatcctgagaggcaaggtattaggagagaaggtgaaatccctgtagctgatttcttgtggtactctgctgccaagccatgcagtcgaaattgctttgaccgtgctgaaattgctagagttatgaatgcggctggtaggaggcgagaagcattaccccaggatcttcagaaaggaatagatcttggcgtggtttctcctgagatactgcaaaacttttttgaccttgagaaatatcctgttatggctgaactgattcaccgattccaaggtttccgtgaaaggttattagctgatcccaaattcctgcatagattagctattgaagagggtatatcaattaccaccactctcatagctcagtatgagaaacggaaaggaaggtttcttgaagagatcgactatgtccttactgatacgattagaggttctgttgttgacttctttacagtgtggcttcctgctcctaccatttcactcttatctttaggtgataatggttctggtgagagtttggagcttctcaaaggacttttagggtcacttccagataatgcatttcaaaagggtattatggggcagagctggaacacaaaccagaggtttgcctcagtgctgatgggtggaattaaacttgctggtgtgggattcatttctagtattggagctggagttgcttcagatgttctgtatgctgctcgtcgagttttgagaccttctacaagtgttgaaacagcgcgcagaagaacccccatatggaaatcggcgactgtttatagttgcttccttggaacatcagcaaatctacgatatcaggtcattgctggtctggtggagcatcgcctaggagaatatctgatggcttactataaccagccgcttcttgctaacttgttgtcctttgtttcacggacaattaattcatactggggaacacagcaatggattgatcttgcacgggctacaggcctgcaaactagtaagaaagagctgccatctccagagatttcaaacctacctgacatgccactgttagaatgtggcacaacagaagtacaaaatatggatgatagcaacaagcaacagccaatgaagtaa</cdnaseq>

Protein Sequence

<aaseq>MLPPAPTRNPGACRFIPLLPPKPLLSPAAAAASSRGGLCVAAAS RRDFLLLVPSIAAASTVLQSLPLSASAADDEKQAASPAPGPAAAPAPTSAGEPEAEAL SRVYDATVIGEPQAVGKDARRRVWEKLMAARVVYLGEAELVPDRDDRVLELEVVRKLA ARCAEAGRSISLALEAFPCNLQEQLNQFMDRRIDGNNLRLYTSHWAPERWQEYEPLLN YCRDNGVKLVACGTPLEVSRTVQAEGIRGLSKAQRKLYAPPAGSGFISGFTSISGRSL IDKISAIHGSPFGPSSYLSAQARVVDDYTMSQKIMKEITNGYPSGMLVVVTGSSHVIY GSRGIGVPARISKKMQKKKQVVVLLNPERQGIRREGEIPVADFLWYSAAKPCSRNCFD RAEIARVMNAAGRRREALPQDLQKGIDLGVVSPEILQNFFDLEKYPVMAELIHRFQGF RERLLADPKFLHRLAIEEGISITTTLIAQYEKRKGRFLEEIDYVLTDTIRGSVVDFFT VWLPAPTISLLSLGDNGSGESLELLKGLLGSLPDNAFQKGIMGQSWNTNQRFASVLMG GIKLAGVGFISSIGAGVASDVLYAARRVLRPSTSVETARRRTPIWKSATVYSCFLGTS ANLRYQVIAGLVEHRLGEYLMAYYNQPLLANLLSFVSRTINSYWGTQQWIDLARATGL QTSKKELPSPEISNLPDMPLLECGTTEVQNMDDSNKQQPMK</aaseq>

Gene Sequence

<dnaseqindica>4368..4526#3542..3664#2798..3343#2472..2579#1639..2169#1121..1250#65..639#ctctggactcgccccatttcctctcgccgccggcgcgtcggcgccgcgcctccggctgaggagaatgctgccccccgcgcccacccgaaacccgggagcctgcaggttcatacccctcctcccaccaaaaccgcttctctctcccgccgccgccgccgcctcctcccgcggtggcctctgcgtcgccgccgcatcccgccgcgatttcctcctcctagtcccctccatcgccgcggcctccaccgtgctccagtccctcccgctatccgcctccgccgcggacgatgagaagcaggccgcgtcgcccgcgccgggccctgcagcggctccggctccaacctccgcgggagagcccgaggcggaggcgctgtcgagggtgtacgacgcgacggtcatcggggagccgcaggccgtggggaaggacgcgcggcggagggtgtgggagaagctgatggccgcgcgggtggtgtacctcggcgaggccgagctcgtgcccgaccgcgacgacagggtgctcgagctcgaggtcgtgaggaagctggcggcacggtgcgccgaggccggaaggagcatctcgcttgcgctcgaagccttcccgtgcaacctccaggagcagctcaaccagttcatggacaggaggtctttgttctacacttctacagttgtacttattagtctagtttatctagctgactgactgactgactatatacaggatgggctcttgttgtgatttatctgtagctttgagtttttagagatttgagtcctaatcgtttcaaattcaagtgcagttagtacttgtcagtctgtagtttgtgttgagctctgagattacttaggctctattagattgtagcgttaaaggctctattagattgtagcgttaaactttgtggaaaccttgccacaatactagctaaaattgccttgcagcaacatcaccaaacaaatgttgtactgtaaaagttccaaccggccaccccaaatggattttctagaattgatatgtacctactacattgcaagcatgatggcggatggccatgaattaatgtctgaatgctgcttatgataatatcaagtgcacttaccttatgaaaattcattctttgctcagaattgatggcaacaacttaaggttgtacacttctcactgggcaccagagcgctggcaggagtatgaaccccttttgaactactgtcgtgataatggagtcaaacttgttgcctgtggaactccacttgaggtaatccatatgttacattgcccccaaatagtgcatgtgatcaattcagttgtattgccataacagtattttttattgatcattcttattttgtagacaagttgcaatttagtcattttatattgatattacaccattccaactggcaagttttttcttgtattttatagttagtctagtgtttttaccaactgaatatgggcctgttctacaccttttttttttggcccatgtccagaaaatgactcctattataaccccctccaccctccttttctcccatgcccaagtaaatgttctgatatgcattatgctaaatatatggtttacttttcatcatttacaatatttggttgaaatacaattatatagtccattttctggctaggtgtcaagaactgtccaagcagaaggaattagaggcctttcaaaagcacaaagaaagctgtacgctcctccagctggctcaggcttcatttctggttttacatccatctcaggccgatcattgatagacaagatttcagcaattcatggctctccatttggcccaagctcgtacctatctgcacaggcaagagtagttgatgactataccatgtcccaaaaaataatgaaagaaattactaatggatatccttcagggatgcttgttgttgtaactggttcaagccatgttatatatggttcacgtggaattggagtccctgctagaatatctaaaaagatgcaaaagaagaaacaagttgtagtacttcttaatcctgagaggcaaggtattaggagagaaggtgaaatccctgtagctgatttcttgtggtactctgctgccaagccatgcagtcgaaattgctttgaccgtgctgaaattgctagagttatgaatgcggctggtaggaggcgagaagcattaccccaggtatcactcgctcttgctcaaatatctgtggtgttacataacctaataattgtaaatgctgtgcatagaggtgttaagtccaatggaaaagtatagctattggcagagagacatatatttgatgaagagtctgtaaaaacaagtgattttttcatcgaatagtcaattgaactcctttaaaagtaattagtgtaaaagatcttggtatagttaatcagtttttgtttactaatacagccttttccccctcttatctctaagaatttgagctaatggtacattctgctttaaatttatgacaggatcttcagaaaggaatagatcttggcgtggtttctcctgagatactgcaaaacttttttgaccttgagaaatatcctgttatggctgaactgattcaccgattccaagtaagctgccatcgcactgtttatcttttgctcttttcccctttacagttttactcgagatctctatttatttatgttagtggttgaccaaaatgctactgctttgaagtatatgctctccttagttatcagaaaaaaaagagtcaattgatgatgctggtatgtcgataatagagatgttccatggttaaattataaaaaatgatcattttatgcagggtttccgtgaaaggttattagctgatcccaaattcctgcatagattagctattgaagagggtatatcaattaccaccactctcatagctcagtatgagaaacggaaaggaaggtttcttgaagagatcgactatgtccttactgatacgattagaggttctgttgttgacttctttacagtgtggcttcctgctcctaccatttcactcttatctttaggtgataatggttctggtgagagtttggagcttctcaaaggacttttagggtcacttccagataatgcatttcaaaagggtattatggggcagagctggaacacaaaccagaggtttgcctcagtgctgatgggtggaattaaacttgctggtgtgggattcatttctagtattggagctggagttgcttcagatgttctgtatgctgctcgtcgagttttgagaccttctacaagtgttgaaacagcgcgcagaagaacccccatatggaaatcggcgactgtttatagttgcttccttggaacatcagcaaatctacgatatcaggtacagaatagctcaccgcgattatatctgtatgtttttactggtggtcttgtgaactccctagttcagctcatatgctattgatagctcaccattgaatttgcttgaccggtaatttgtgatgaaaataaaggcaacttaacatttcccattcaattttgagaatgatttgtaacgttgcccagtatatatgttcaggtcattgctggtctggtggagcatcgcctaggagaatatctgatggcttactataaccagccgcttcttgctaacttgttgtcctttgtttcacggacaattaattcatactggggaacacaggtagactgtttcttcactttttatctccccgtgattttttccgtagttaaattgtgtgctcaggctggttaatgtatagagcagaaatagataagagctgctagacctacagttatatagtactacttctgttttatattataagtcgttttgatttttttgtcaagtcaaacttctttagttttgatcaagttagtagaaaaatataataatatttttgatataaaataaagaaactatcaaaatatattcaatgttagatttactaaattggtactataagtgttgctatgttttatttataagtttggtcaaacttgaagtttgattttaaaaaggtcaaagcgacttataatatgaaacgaaaggagtattaaatggcaagcattctaaaaaactcctataaacatgcactggtgtctaaccgtatatttgtgcaggggatatgactagttgagatgaagagcgaaattctcattattcactagtagtgtagtagtataatactactaagtagtccttgatcagctttttgtttgataaaacatttgttaaactccttcatggacattaatgaaaacctttcattgataggatcaatccctgcaaagtactactgtagtctccaacttcatatatattacacaagttaggacttgcaatctaccgtttctttgctgacacttgtgcttgatcgatgcagcaatggattgatcttgcacgggctacaggcctgcaaactagtaagaaagagctgccatctccagagatttcaaacctacctgacatgccactgttagaatgtggcacaacagaagtacaaaatatggatgatagcaacaagcaacagccaatgaagtaaccgtacatagccaatgactccttggcctgtttgattgtggccattcaacacagggacaacttttgttttgatcacccgatactgtacaggtatatatacgggaaagacttcgtacggcagattgaagctcgtcgatatttttgtttcccaatctttatggccaggccaattttaacccttcgagagtatatatttgtacatcagtgaatgaaacaaatcaagttcgaaacacgtaaacaattacacgcaggagttccctctgaacacatcctatttactcattctgaatccaatgttttcttgaggattggcagt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0826900, RefSeq:Os01g0826900