Os01g0827300

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Revision as of 05:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0827300| Description = Similar to Laccase precursor (EC 1.10.3.2)| Version = NM_001051214.1 GI:115440798 GeneID:4327522| Length = 2504 bp| ...")
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Gene Name

Os01g0827300

Description

Similar to Laccase precursor (EC 1.10.3.2)

Version

NM_001051214.1 GI:115440798 GeneID:4327522

Length

2504 bp

Definition

Oryza sativa Japonica Group Os01g0827300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37158642..37161145

Sequence Coding Region

37158753..37158848,37158986..37159137,37159282..37159526,37159632..37159760,37159857..37160938

Expression

GEO Profiles:Os01g0827300

Genome Context

<gbrowseImage1> name=NC_008394:37158642..37161145 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37158642..37161145 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgtcctcgtcgtcccggctgctcttcctcctctcgtgcagcgtgctcgcgctgctcgccggcgccgaagtgcaccatcatgaattcattgttcaagagacgccggtgaagaggctgtgcaagacacacaacgtgatcacggtgaacgggcagctgccggggccgacgctggaggtccgggagggcgacaccgtggtgatcaacgtcgtcaaccacgcgcagtacaacgtcaccatccattggcacggcatccggcagttcaggacggggtgggcggacgggccggagttcgtgacacagtgcccgatcaagccgggcggcagctacaagtaccggttcaccatcgaggggcaggagggcacgctgtggtggcacgcgcacagctcctggctcagggccaccgtctacggcgcgctcatcatccgccccagggagaacaagacctaccccttcgagaagcccgcgcgagaagtcccccttattctcggggaatggtgggacgcggacccgatccaagtcatcagggaggctcagaggaccggcgccgcgccgaacatctccgacgcgtacaccatcaacggtcagcctggtgatctgtacaactgctccaaggaagagaccacggctgtcccggtgaagcccggcgagacggcgctgctgcggttcatcaacgcggcactcaaccaggagctgttcgtctcgatcgcgcagcacaagatgaccgtggtcggcgtcgacgcgtcctacaccaagccgttcaccacctcggtgctcatgatcgcgccgggccagaccaccgacgtcctcgtcaccatggaccaggcgcccacccggtactacctcgccgcgcgcgcctacgactccgcgcagggcgtggcctttgacaacaccaccaccacggccgtcatcgagtacgactgcggctgcgccaccgacttcggcccctccatcccgccggcgttcccggtcctcccggcgttcaacgacaccaacaccgccaccgccttcgccgcgggcatcaggagcccccacgaggtcaagatccccggccccgtcgacgagaacctcttcttcaccgtcggtgtcggcctgttcaactgcgagcccgggcagcagtgcggtggcccgaacaacactcgcttcacggccagcatgaacaacatctccttcgtcttcccgcagaccacctcgctcctccacgcgcactactacggcatccccggcgtgttcaccaccgacttcccggcgtacccgccggtgcagttcgactacacggcgcagaacgtcccccgctacctgtggcagcccgtcccggcgacgaagctgtacaagctcaagttcggctccgtggtgcagatcgtcctgcaggacaccagcatcgtctcgccggagaaccaccccatccacatccacggctacgacttctacatcctcgccgagggcttcggcaacttcgaccccaagaaggacgccaagaagttcaactacgtcgacccgccacagaggaacaccgtcgcggtgccgacaaacggctgggccgtcatccggttcgtcgccgacaaccctggggtgtggctcatgcattgccatcttgacgtgcacataacctggggcctggcaatggcgttcctggtggaggatgggtatggcaaactggagactctggaggcgcctcctgttgatcttccaatgtgctag</cdnaseq>

Protein Sequence

<aaseq>MASSSSSRLLFLLSCSVLALLAGAEVHHHEFIVQETPVKRLCKT HNVITVNGQLPGPTLEVREGDTVVINVVNHAQYNVTIHWHGIRQFRTGWADGPEFVTQ CPIKPGGSYKYRFTIEGQEGTLWWHAHSSWLRATVYGALIIRPRENKTYPFEKPAREV PLILGEWWDADPIQVIREAQRTGAAPNISDAYTINGQPGDLYNCSKEETTAVPVKPGE TALLRFINAALNQELFVSIAQHKMTVVGVDASYTKPFTTSVLMIAPGQTTDVLVTMDQ APTRYYLAARAYDSAQGVAFDNTTTTAVIEYDCGCATDFGPSIPPAFPVLPAFNDTNT ATAFAAGIRSPHEVKIPGPVDENLFFTVGVGLFNCEPGQQCGGPNNTRFTASMNNISF VFPQTTSLLHAHYYGIPGVFTTDFPAYPPVQFDYTAQNVPRYLWQPVPATKLYKLKFG SVVQIVLQDTSIVSPENHPIHIHGYDFYILAEGFGNFDPKKDAKKFNYVDPPQRNTVA VPTNGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVEDGYGKLETLEAPPVDLPM C</aaseq>

Gene Sequence

<dnaseqindica>112..207#345..496#641..885#991..1119#1216..2297#atcgccacacagaaaccttcagggcaagagctatagctaagctactgtgtcacccgttcgatcggtgagccgacgccagcacacgcgccgcaacgtttgcgcttagccggcatggcgtcgtcctcgtcgtcccggctgctcttcctcctctcgtgcagcgtgctcgcgctgctcgccggcgccgaagtgcaccatcatgaattcattgtacgtgccatatattttcctcttgtgtcatcttactagctacgagcacactattattgcctgtatatctcgatgcaccgttttctgtacgtgtaattaatgtactggtactgctttttgtgtatggattattgaaggttcaagagacgccggtgaagaggctgtgcaagacacacaacgtgatcacggtgaacgggcagctgccggggccgacgctggaggtccgggagggcgacaccgtggtgatcaacgtcgtcaaccacgcgcagtacaacgtcaccatccattggtacgtgtcgtcgacccaactacgtacaccaatcaaacagctaacgacttccgctcctggtcgtcaacggcgacgattgttgttttctgcgccgccggtcgagatctagctagctaacacatggtgatcaacgcgcgcgtgcaggcacggcatccggcagttcaggacggggtgggcggacgggccggagttcgtgacacagtgcccgatcaagccgggcggcagctacaagtaccggttcaccatcgaggggcaggagggcacgctgtggtggcacgcgcacagctcctggctcagggccaccgtctacggcgcgctcatcatccgccccagggagaacaagacctaccccttcgagaagcccgcgcgagaagtcccccttattctcggtcagtcttgatccttcctacttttgtacacagatctgcatattaactatcagatcagtcgtctgaactgacactgaaaatgttggcacttggcacgatggacaggggaatggtgggacgcggacccgatccaagtcatcagggaggctcagaggaccggcgccgcgccgaacatctccgacgcgtacaccatcaacggtcagcctggtgatctgtacaactgctccaaggaaggtagaaaatcactcactctagtatgcgtgttctaccagccagtgtgtgtgcgtcagtgcgtggcaaatttacagagacatgataacatgcatgcagagaccacggctgtcccggtgaagcccggcgagacggcgctgctgcggttcatcaacgcggcactcaaccaggagctgttcgtctcgatcgcgcagcacaagatgaccgtggtcggcgtcgacgcgtcctacaccaagccgttcaccacctcggtgctcatgatcgcgccgggccagaccaccgacgtcctcgtcaccatggaccaggcgcccacccggtactacctcgccgcgcgcgcctacgactccgcgcagggcgtggcctttgacaacaccaccaccacggccgtcatcgagtacgactgcggctgcgccaccgacttcggcccctccatcccgccggcgttcccggtcctcccggcgttcaacgacaccaacaccgccaccgccttcgccgcgggcatcaggagcccccacgaggtcaagatccccggccccgtcgacgagaacctcttcttcaccgtcggtgtcggcctgttcaactgcgagcccgggcagcagtgcggtggcccgaacaacactcgcttcacggccagcatgaacaacatctccttcgtcttcccgcagaccacctcgctcctccacgcgcactactacggcatccccggcgtgttcaccaccgacttcccggcgtacccgccggtgcagttcgactacacggcgcagaacgtcccccgctacctgtggcagcccgtcccggcgacgaagctgtacaagctcaagttcggctccgtggtgcagatcgtcctgcaggacaccagcatcgtctcgccggagaaccaccccatccacatccacggctacgacttctacatcctcgccgagggcttcggcaacttcgaccccaagaaggacgccaagaagttcaactacgtcgacccgccacagaggaacaccgtcgcggtgccgacaaacggctgggccgtcatccggttcgtcgccgacaaccctggggtgtggctcatgcattgccatcttgacgtgcacataacctggggcctggcaatggcgttcctggtggaggatgggtatggcaaactggagactctggaggcgcctcctgttgatcttccaatgtgctagtgatcagcattcggcagatgatgatactgcgttaagaatacaaaatcccgttcatgtcgtattccaaattgatgctttttgggggtttattttgtgatctccagtactaggggttgatttttcatcttgatttgagctttcccctgtaaagttaagagtttttatgtgatttctatgcattattttggaataaatcctttttgtagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0827300, RefSeq:Os01g0827300