Os01g0828300

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Revision as of 05:08, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0828300| Description = Protein of unknown function DUF248, methyltransferase putative family protein| Version = NM_001051220.1 GI:115440810 ...")
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Gene Name

Os01g0828300

Description

Protein of unknown function DUF248, methyltransferase putative family protein

Version

NM_001051220.1 GI:115440810 GeneID:4327528

Length

4962 bp

Definition

Oryza sativa Japonica Group Os01g0828300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37192608..37197569

Sequence Coding Region

37192731..37193384,37193985..37194134,37194405..37194674,37194833..37194944,37195563..37195734
,37195966..37196229,37196757..37196951,37197063..37197270

Expression

GEO Profiles:Os01g0828300

Genome Context

<gbrowseImage1> name=NC_008394:37192608..37197569 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37192608..37197569 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatctcctccgccctctccttcctctccgatcgcaagcgccctatcgttgtttccgtcttcctcttcctcctcctctcatccctcttcctcctcttcagccccgcacctgccgcgctccctttcttctccttcccctcctctcacctctcctcctcctcctcctctcctatcgccgccacgccgccacccctgactccagtttccgtccccgccaacgcatcttcaccggagaccccagttgacgcgtccggtgggagcaacgctggcgccaccgcacccaccagggacgctcctcagccagatcgcagtcggagcacgccccctgccgccgtcggagtgcgtggatcggcgggcaccaacggaaccagcaggggcgtctcggccggcggcgatggagcaggagcagcagcggcggcggcggcaggtgtggcggtgccgtcgtgggaggtgtgcgaggtggggaagggagtggtggccgcggactacataccgtgcctggacaacgtgaaggcggtgaaggcgttgaagtcgctgcgtcacatggagcaccgggagcgccactgcccgacggcgccgaggccgaggtgcctcgtgccgctgcccacggggtaccggtcacccttgccgtggccgcgcagccgtgacatgatttggtacaataatgtccctcatccaaagttagtggaatacaagaaggaccagaactgggttaggaagtctggcaattattttgttttccctggaggtggaactcaatttaaagctggtgtgactaaatacattcgatttattcaacagatcatgccaaacattgaatgggggacccatacaagaactgttctggatgttggatgcggtgttgccagctttggtggatacttgcttgacaggaatgtcattactatgtctgttgcacccaaagatgagcatgaagctcagatacagtttgctctcgaacgtggaattccagcattgttggcagtgattggaacacaaaaacttccattccctgataattcatttgatgtgatccattgtgcaaggtgtagggtccactggtatgctgatggtggaaaaccattattagagcttaatagagtgctcaggcctggaggatactacatctggtctgcaactcctgtatatcgtcgtggcaaaagagatgaagacgactggaatgcgatggttactctgaccaagtcaatttgctggaggacagtagtaaaatctaaggatgttaataggattggtgttgttatatatcagaagccaacctcaaattcttgctactttgagagaaaacagaatgaaccacccctatgccctagtagggaaggatcacattccccttggtatgcaccacttgatagttgcctcttgttacctgctgtgtcaagttcaggtgaaggaaacagctggcccatttcctggccagaaaggcttaacatcaaatactcaactatatctgacaacgcttctactcagttttctcaagaaaaatttgattctgacacaaagcactggaaggaccttgtttcagaagtatatttcaatgagtttgcagttaattggtctaccgttcgcaatgtcatggatatgaatgctggttttggaggatttgcggcgtcactcatccacaaacctttgtgggttatgaacgttgtaccttttgatcatccagaagccttgcctatcattttcaacagaggtttgattggggtatatcatgactggtgtgaatcttttaatacatatccccggacctatgatcttgttcacatgagttatctccttcagggcctcacaaataggtgtgatatcattgaagtagcagcagaaattgataggatacttagacctggaaaatggttcgtgttgcaagatactgagcaagtgattagaaaaatggatccagttcttcgctctttgcactacaggactgcaattgtgaagcaacaatttcttgtcgctacaaagggcttctggcgcccatacagtgcaggttctgagtcaagatga</cdnaseq>

Protein Sequence

<aaseq>MAISSALSFLSDRKRPIVVSVFLFLLLSSLFLLFSPAPAALPFF SFPSSHLSSSSSSPIAATPPPLTPVSVPANASSPETPVDASGGSNAGATAPTRDAPQP DRSRSTPPAAVGVRGSAGTNGTSRGVSAGGDGAGAAAAAAAGVAVPSWEVCEVGKGVV AADYIPCLDNVKAVKALKSLRHMEHRERHCPTAPRPRCLVPLPTGYRSPLPWPRSRDM IWYNNVPHPKLVEYKKDQNWVRKSGNYFVFPGGGTQFKAGVTKYIRFIQQIMPNIEWG THTRTVLDVGCGVASFGGYLLDRNVITMSVAPKDEHEAQIQFALERGIPALLAVIGTQ KLPFPDNSFDVIHCARCRVHWYADGGKPLLELNRVLRPGGYYIWSATPVYRRGKRDED DWNAMVTLTKSICWRTVVKSKDVNRIGVVIYQKPTSNSCYFERKQNEPPLCPSREGSH SPWYAPLDSCLLLPAVSSSGEGNSWPISWPERLNIKYSTISDNASTQFSQEKFDSDTK HWKDLVSEVYFNEFAVNWSTVRNVMDMNAGFGGFAASLIHKPLWVMNVVPFDHPEALP IIFNRGLIGVYHDWCESFNTYPRTYDLVHMSYLLQGLTNRCDIIEVAAEIDRILRPGK WFVLQDTEQVIRKMDPVLRSLHYRTAIVKQQFLVATKGFWRPYSAGSESR</aaseq>

Gene Sequence

<dnaseqindica>124..777#1378..1527#1798..2067#2226..2337#2956..3127#3359..3622#4150..4344#4456..4663#tctgcaactctctgcactgtccccgcttccttccacggccacggcggcggccatcgccgccgtcggcgatctcgccctgctccatcccgctctcccgtttccaatcccccaaccggagcagaaatggccatctcctccgccctctccttcctctccgatcgcaagcgccctatcgttgtttccgtcttcctcttcctcctcctctcatccctcttcctcctcttcagccccgcacctgccgcgctccctttcttctccttcccctcctctcacctctcctcctcctcctcctctcctatcgccgccacgccgccacccctgactccagtttccgtccccgccaacgcatcttcaccggagaccccagttgacgcgtccggtgggagcaacgctggcgccaccgcacccaccagggacgctcctcagccagatcgcagtcggagcacgccccctgccgccgtcggagtgcgtggatcggcgggcaccaacggaaccagcaggggcgtctcggccggcggcgatggagcaggagcagcagcggcggcggcggcaggtgtggcggtgccgtcgtgggaggtgtgcgaggtggggaagggagtggtggccgcggactacataccgtgcctggacaacgtgaaggcggtgaaggcgttgaagtcgctgcgtcacatggagcaccgggagcgccactgcccgacggcgccgaggccgaggtgcctcgtgccgctgcccacggggtaccggtcacccttgccgtggccgcgcagccgtgacatggtgagcatgactgcttgccttcttcggtaagcgaggaagcggttttaccttgttcattccacaatggtgaaatggtagtaatggtaatttgatattgctaaatcttgtcccataggagtacctgacaaagagtctgttgtgtgccgtgtggtttggctgtgccgtgatcggtgatactcaacccaaactagcatgtttaagcatccaagtaaacaaagcaaacattgcagtttcttcagtattttgttactaaactagctactgttatgaacttatatgtacaaatgaacctggaaaccataatggagaacactgttagggtcttagggacgtggcttcaacgtccccgtctaatgtatgttgccaggttgagaattgtgcatatccactaggtagtaggattttttttttgtcaaatcagaaagacccgtgcattttatctgtgcaactatcgtccacaagatgttcatcaactagaattctgttttataaaagccaattgtggcatcgtccacaagatgttcatcaactagaattctgttttataaaagccaattgtggctatatcttgtgatgacatatttcctctgcaaatttcagatttggtacaataatgtccctcatccaaagttagtggaatacaagaaggaccagaactgggttaggaagtctggcaattattttgttttccctggaggtggaactcaatttaaagctggtgtgactaaatacattcgatttattcaacaggtatatactttagaagttgttaagtcgtagataagtttcataatattaagacaataaatttatgcttgtctgtgaaacaacttcacagcctaagttcagtgtttaagtggcatattcctaaaattaatatggatcctggtggttcaaaagcaaacatggacatatattcctaggataatcatgcaaagttaaaatatattgcttcaaagtatccgatatgatgttatcccttgttataattgtttacttccagccttgttgatttaatagatcatgccaaacattgaatgggggacccatacaagaactgttctggatgttggatgcggtgttgccagctttggtggatacttgcttgacaggaatgtcattactatgtctgttgcacccaaagatgagcatgaagctcagatacagtttgctctcgaacgtggaattccagcattgttggcagtgattggaacacaaaaacttccattccctgataattcatttgatgtgatccattgtgcaaggtgtagggtccactggtatgctgatggcaagtactttaaaccattgttgatatgtttatcttacaattcttcacgttgttgacttttaaataggaatgttcagtgggttcatttattatattttctatgttaaaatgtaatgcgcacttttttaattatgacttcactaacctggggcatacaggtggaaaaccattattagagcttaatagagtgctcaggcctggaggatactacatctggtctgcaactcctgtatatcgtcgtggcaaaagagatgaagacgactggaatggttagtaagatctattatgtgtcgtagtgatttttaccatcataagttctcaaattacacattactatctcaaacaaattatgcatctttgcggaacagataaataatttgttgctaagaaggtttcatgcatagtattttattgtgaccctatataatagcaagttccatgctggcttatattaagtagaataaaaaaaagactgtaaatttggtacctctgtataatgaaggggtgtgtactagaagggaaattacaaagtcttgttagaacgagtgaaagcttcagaggcttggcacactaagttcccaggcagttgagatagcatcacattttaagaatataaaaagtatcgtctcagttatgttgacatttttaacaatattggtgtgtaacacagtctgcagttaagaacatgaatttaacaaattcatatgatagtgttctcattatgcgtgtatgattacagaatatttcactgttgtttgacctgtgatgggtttatatatgttactacctgttacttttccttaaaggcacggatcaatatagtttacatatgattgtagggatcaatgtattcttgctaactggagtttgtgttccacttattgcagcgatggttactctgaccaagtcaatttgctggaggacagtagtaaaatctaaggatgttaataggattggtgttgttatatatcagaagccaacctcaaattcttgctactttgagagaaaacagaatgaaccacccctatgccctagtagggaaggatcacattccccttggtacatcttattgatgagtcatttcctttgttttatttcacatacagttgagacttacacaatttgtgcaagtccttacatcactagtgcatgtttgggctgattgctgcactgatgtaggcacttaagttttgtgtcatctgctagtagttcttgctactggtgtctaagctttgtagaagttttattgtactagataaactaatgttatttttttgttgccctctttaggtatgcaccacttgatagttgcctcttgttacctgctgtgtcaagttcaggtgaaggaaacagctggcccatttcctggccagaaaggcttaacatcaaatactcaactatatctgacaacgcttctactcagttttctcaagaaaaatttgattctgacacaaagcactggaaggaccttgtttcagaagtatatttcaatgagtttgcagttaattggtctaccgttcgcaatgtcatggatatgaatgctggttttggagggtgagaaaactttgattcttaattttcttcaatgggcttgttgatatttcacaagttatgaccatgtctttcaatgtttgaatgctttgttttgatcccatgaaattttctgtcctttgttttcctgaatagttagactgttcatttggtttagtccggttgttggttttgagagtttatatattggtcccagtgttctagtgttcactattccttatatggtagcttttctattgaagagtacatttcattttgtttagtggatttcagcagccaatctttacacgtataggcttgaacttcttgaatttctgaaatgtcccagattgtagtctaatagtagcttgttgtgttaaggatctatcattctatgtaatcttcaaaagcagatgttctgttcacacgattccaattgctgtttacagtatgtttcaaggatccttctttttcttataacgatgagcagtctagctatatagtttgtttgatggtgagataaaattacctggttttctttcttctaccagatttgcggcgtcactcatccacaaacctttgtgggttatgaacgttgtaccttttgatcatccagaagccttgcctatcattttcaacagaggtttgattggggtatatcatgactggtgtgaatcttttaatacatatccccggacctatgatcttgttcacatgagttatctccttcagggcctcacaaataggtgaaaaatcatgtcttgattctttgagaactgttctgtttaaatatcattattctcttctaccaacgtacagaatcaagcaagcttggtattaatgcttttgtattttaggtgtgatatcattgaagtagcagcagaaattgataggatacttagacctggaaaatggttcgtgttgcaagatactgagcaagtgattagaaaaatggatccagttcttcgctctttgcactacaggactgcaattgtgaagcaacaatttcttgtcgctacaaagggcttctggcgcccatacagtgcaggttctgagtcaagatgattcatgcttcgtcttctgttgctgttagtaaaaatcaaacaactgatttgattctttaaattctaattacatggattcttcgcatagcatagatgacacaaattagccccatatcaacggtgagttcattccctctgtttgtagttagcagtccatattaaccatcgggcttactgagttgattcttttgtttccgttttgttgtgtacaaattaaagaacttatggctacagcaatagccaataggttagcaataacagattgtggattttgaaagcatgtcttgattattcattggt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0828300, RefSeq:Os01g0828300