Os01g0833100

From RiceWiki
Revision as of 05:09, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0833100| Description = NLI interacting factor domain containing protein| Version = NM_001051245.1 GI:115440860 GeneID:4327404| Length = 269...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0833100

Description

NLI interacting factor domain containing protein

Version

NM_001051245.1 GI:115440860 GeneID:4327404

Length

2693 bp

Definition

Oryza sativa Japonica Group Os01g0833100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37416992..37419684

Sequence Coding Region

37417259..37417393,37417475..37417628,37417842..37417923,37418001..37418121,37418210..37418338
,37419243..37419560

Expression

GEO Profiles:Os01g0833100

Genome Context

<gbrowseImage1> name=NC_008394:37416992..37419684 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37416992..37419684 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggaggtgtactcgccgacggcggcggcggcggcgcagcagcagcagcgggggaaggtggcggcgcaggcgtggcaggcggtggtggggtggatcgggttcctcctccaggtcctgctccagatcctccggggcaccccatcctgcgcccagctcctctccttcgtcgggttccgctacccgctcctctccgggccggccgactccgagcagtcgccgtcggtggccttcatgccgctccgctccgagatcccggccgacacggcccctgcgccgacgcccccgccggaatccctgcagcgcctcacggttgtgcttgatttggatgaaactttagtttctgcatatgaatcatccagtcttccagctattgtacgcacccaagctgttgaagctggattacattgctttgacatggagtgcatatccactgagaaggatgttgaagggagaaacaaagtgaatcatgtcaccgtttttgaacgtcctggtttgcacgagttcttgcagaaaactagtgaatttgcagatcttattctctttacagcaggtttggaaggttatgcaagacctttagttgacagaatagatgtccataatagattcaaactccgtctatatcgtccatcaactgttactacggaatacagagaacatgtcaaagatctttcttgcgtgtcaaaagatttctgcagagttgtcattgttgacaacaacccattcagtttcatattgcaacctttgaatggaataccctgtgttccattttcagctggacaacataatgataatcagctcatggaagttatatttccacttctgaagcatctctctatccagagagatgttagaccagcactatacgaaagatttcatatgcctgaatggttccaaaaacatggcatcccccaaactgatcaggcagtgtaa</cdnaseq>

Protein Sequence

<aaseq>MAAAEVYSPTAAAAAQQQQRGKVAAQAWQAVVGWIGFLLQVLLQ ILRGTPSCAQLLSFVGFRYPLLSGPADSEQSPSVAFMPLRSEIPADTAPAPTPPPESL QRLTVVLDLDETLVSAYESSSLPAIVRTQAVEAGLHCFDMECISTEKDVEGRNKVNHV TVFERPGLHEFLQKTSEFADLILFTAGLEGYARPLVDRIDVHNRFKLRLYRPSTVTTE YREHVKDLSCVSKDFCRVVIVDNNPFSFILQPLNGIPCVPFSAGQHNDNQLMEVIFPL LKHLSIQRDVRPALYERFHMPEWFQKHGIPQTDQAV</aaseq>

Gene Sequence

<dnaseqindica>2292..2426#2057..2210#1762..1843#1564..1684#1347..1475#125..442#gtcctcctccccccctcctccctcctccggttgcctctccggcctcgccaccgccatcgccttcgcctccccgcctcccaaccgccccacgttgcggggagacagctcgccgcgggcggcgatcatggcggcggcggaggtgtactcgccgacggcggcggcggcggcgcagcagcagcagcgggggaaggtggcggcgcaggcgtggcaggcggtggtggggtggatcgggttcctcctccaggtcctgctccagatcctccggggcaccccatcctgcgcccagctcctctccttcgtcgggttccgctacccgctcctctccgggccggccgactccgagcagtcgccgtcggtggccttcatgccgctccgctccgagatcccggccgacacggcccctgcgccgacgcccccgccggaatccctgcagcgcctcacggtacgaagattcggttttgagtggattcgttgacgctatggggttcctcggtagtttggtaaggggggaaatggctagtttagggatgatatgggcatcatttggatgaaacagtagatgtgggaggagcctcttgatctgatttttgatgtcccggtcttcgtgggagatttaggatttggtagatgcgtagagtgattgatttgaggttagctgggtgttattccggcttaattcaggcaattcgatttgttttgggggctaattattgtgtgggttgtaaagctgaccttttttgtggggatttgaattgcgatgattttgttttcttggcttacgagcatgggcaatccgttgtcctgcaatccccaatcaagtcctcgtttagcagccaacaatggcgttaatccgtctctctgaattatactgcttggataattcatgaaatgatgatttaatattccaaaattgcaacggtgctggtgttggtacttaaccgggacaatacattgctgcagtctttagcagagctgtggatggtaatttagaacgtccgttgaaatcgatgtgtagatgagtagatatttgagcagtgttgtgggataatgcatttggtgatgatacattatgactgtaattgaatcagaattatgagattatacatatggtgattatatatgaattatcatgtgggattaacattggctaatttgctcatagcagggtttcctgttagcatattttgttttagtgggtgaagaacttggatggttttatgttgagctttcagttttacataaaacaaaagatgaaatgataacagttttacataaaacgaaaaatgaaatgataattataagttattcattcaccatttctgaaaatatttgggttatctattcaggttgtgcttgatttggatgaaactttagtttctgcatatgaatcatccagtcttccagctattgtacgcacccaagctgttgaagctggattacattgctttgacatggagtgcatatccactgagaaggtacagaacttgtgcttttggctcttattgtatgtaatgattttaatcactactgctaaaggatcttttgcttgtgtgaactgtaaaggatgttgaagggagaaacaaagtgaatcatgtcaccgtttttgaacgtcctggtttgcacgagttcttgcagaaaactagtgaatttgcagatcttattctctttacagcaggtttggaaggtatgtgcttgctactatttttcttcattcatttgaacccaattagcgccacctcacatgcccatgtttgttctcaggttatgcaagacctttagttgacagaatagatgtccataatagattcaaactccgtctatatcgtccatcaactgttactacgtaagttactgttaactttcctatggatacacatggtgttttaccatattatcatagtgctgctgcattcattactatgcttgctgagatgtgtgccaaattagttgagggctatgtgttaagtggctttttttcttgctggaaatgtcgcataggacctatttggtgtttggccaatgcgctttctgatatccatgggatgcacaatttcagggaatacagagaacatgtcaaagatctttcttgcgtgtcaaaagatttctgcagagttgtcattgttgacaacaacccattcagtttcatattgcaacctttgaatggaataccctgtgttccattttcagctggacaacataatgataatcaggtagctgataactgccaccagtctttagccatgtttgagtttccactacttactaattctgacttgtttaaacgttttcagctcatggaagttatatttccacttctgaagcatctctctatccagagagatgttagaccagcactatacgaaagatttcatatgcctgaatggttccaaaaacatggcatcccccaaactgatcaggcagtgtaaattttgcagccgctacatgaaattgttttgatgaaggctgaaacgcctgccacgccataagtccgttctcaggggatagcacctgtacattattatttatatattcgtttaggtttcctggatcctgataaaaatcaagtcaaggttcgtacagaattgccatgtctgaagacaaaaggaattgtaatctagcagaatgttagattggtatttgtgtagtggggcatttaaacaccagttgtatatcaccttctgttgtaaaatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0833100, RefSeq:Os01g0833100