Os01g0837500

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Revision as of 05:09, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0837500| Description = Similar to Ruvbl1 protein| Version = NM_001051273.1 GI:115440916 GeneID:4327368| Length = 5354 bp| Definition = Ory...")
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Gene Name

Os01g0837500

Description

Similar to Ruvbl1 protein

Version

NM_001051273.1 GI:115440916 GeneID:4327368

Length

5354 bp

Definition

Oryza sativa Japonica Group Os01g0837500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37658819..37664172

Sequence Coding Region

37658908..37658988,37659136..37659324,37660405..37660536,37660681..37660830,37661152..37661307
,37662050..37662184,37662294..37662359,37662604..37662710,37662846..37662945
,37663024..37663115,37663614..37663683,37663817..37663906

Expression

GEO Profiles:Os01g0837500

Genome Context

<gbrowseImage1> name=NC_008394:37658819..37664172 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37658819..37664172 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggatcgaggaggtgcagtcggcggcgaagaagcagcgcatcgccacccacacccacatcaagggcctcggcctcgacgccaatggggcggcgatagggctggcttcggggttcgtggggcaggcggcggcgcgggaggcggccggcctggtggtcgacatgatccgccagaagaagatggccggccgcgcgctgctcctcgccggcccgcccgccaccggcaagacggccctcgctctcggcatctctcaggagctaggtagtaaggtccccttctgtcctatggtgggatcagaagtgtattcctcagaggtcaagaaaactgaggtgctgatggaaaatttccgtcgagctataggcttgcgtataaaagaaaataaagaggtttatgaaggagaggttactgaactttcgccagaagaagctgagagtacaacaagtggatatggaaaaagcattagccatgtaatcataggtctgaagactgtaaaagggactaagcagctgaagttagatcctacaatttacgatgctttaataaaggaaaaggtggcagtgggtgatgttatatacattgaagctaatagtggtgcagtgaaaagagttggtagatgtgattcttttgctacagaatacgatcttgaagctgaggagtatgttccgattcccaaaggagaggtccataagaaaaaggaaatagtgcaggatgttacacttcatgaccttgacgctgcaaatgctcaaccacaaggaggccaagatattttgtcccttatggggcaaatgatgaagccacgaaagactgaaatcactgacaagcttcggcaagaaatcaataaggtggtcaacagatatattgatgaaggaattgcagagcttgtacctggtgttctgttcattgatgaggtccacatgctagatattgaatgcttctcttatcttaatcgtgctctggagagcccattatcaccaattgtgatacttgcgacaaatagaggaatatgtaatgtaagaggaactgatatgacaagtccgcatggtataccagttgatcttctagatcgattggtgattattcgaacagaaacatacggtcccactgagatgatccagattcttgctattagagcacaggtagaagagattgagatcgatgaagaaagtcttgcatttttaggagagatcggacaacagacatctttgaggcatgctattcagctgctatcacctgccagcgtagttgcaaaggctaatgggagagaaaagatcagcaaggccgatcttgaggaagtcagtggtctgtacttggatgctaaatcgtcggcgcgtctccttcaggagcagcaggaaagatacatcacctaa</cdnaseq>

Protein Sequence

<aaseq>MRIEEVQSAAKKQRIATHTHIKGLGLDANGAAIGLASGFVGQAA AREAAGLVVDMIRQKKMAGRALLLAGPPATGKTALALGISQELGSKVPFCPMVGSEVY SSEVKKTEVLMENFRRAIGLRIKENKEVYEGEVTELSPEEAESTTSGYGKSISHVIIG LKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRCDSFATEYDLEAE EYVPIPKGEVHKKKEIVQDVTLHDLDAANAQPQGGQDILSLMGQMMKPRKTEITDKLR QEINKVVNRYIDEGIAELVPGVLFIDEVHMLDIECFSYLNRALESPLSPIVILATNRG ICNVRGTDMTSPHGIPVDLLDRLVIIRTETYGPTEMIQILAIRAQVEEIEIDEESLAF LGEIGQQTSLRHAIQLLSPASVVAKANGREKISKADLEEVSGLYLDAKSSARLLQEQQ ERYIT</aaseq>

Gene Sequence

<dnaseqindica>90..170#318..506#1587..1718#1863..2012#2334..2489#3232..3366#3476..3541#3786..3892#4028..4127#4206..4297#4796..4865#4999..5088#agcgctccccgccgttcccaaatttgttgcggcgggagagggtcggagagacaagcagcggcggcggcggcgcgtgctcggcggcggcgatgaggatcgaggaggtgcagtcggcggcgaagaagcagcgcatcgccacccacacccacatcaagggcctcggcctcgacgtgcgtgctcatcttccgcgcttctccgtgcaacgcgggggggttttctcctagggttttagcctcggggtgattcgcgtagatctccgtgttttttttgttcttttttctgacggtttggcttgttggtttggtttcatcgagcaggccaatggggcggcgatagggctggcttcggggttcgtggggcaggcggcggcgcgggaggcggccggcctggtggtcgacatgatccgccagaagaagatggccggccgcgcgctgctcctcgccggcccgcccgccaccggcaagacggccctcgctctcggcatctctcaggagctaggtagtaaggttggtgcttcaacttattctcctcggacaaactgtattattgttggggtatttggattgatggagataaatgtttgcttctgaaatgcacaatgctacactttctccgctgtatttcgtaccgttgaggactgcgctagatttgtactcgacgctacaaactaggatgttagatttaggctccatagtgaacacacactgttatttacaacggatgcttactgcaagcttattccaaggcagaagtttgcaatttcgcttgtctgctagtgaagagattgaggatcctcctggggtaaaatggtaggttcgaaaggttgcaaaccaaccaaactgggtccgaatttcacttacaattatgatgtgtgacgggggataaatttcctacctctgatacgacatgcttagtttaagaggtcttattcagtttcctagttctcttcactgaagaatgagttaaatcatctagctgctcagatgaatcccatttatcaagttcaatgaggattactggtggacacttgataataagccttcttgaaatgtttgatttttttcattcttcaattagctagtgtaaataagtaattctgcattcacaagggctcatctagctccacaaaggtgtttatattgagcttcaggtatttgagatccatgccttgtcattttctaaattgaactttgataggatgattcaattagattttagattcacctaattaaacttgtgttatggtctatgtttttgcctttcagcattttttgagatttggatgtttgttgctagctggttcaatatgttatagtgccttttcgcctgttggtgaaaagttccttattccttgaaaatatttgtgctaagatttctgaggctaaattattgtggatcactggcataagatgtcaacttattggatacctgtacattttgtttgttttattcctaagaactatatgataaattttgtctgtaatagttatgagttttttgtttgatgccctacatctacttcagttttggtaaaagttccaatgtatctaatggttgatatgttgtcttgttatttcataacacaggtccccttctgtcctatggtgggatcagaagtgtattcctcagaggtcaagaaaactgaggtgctgatggaaaatttccgtcgagctataggcttgcgtataaaagaaaataaagaggtttatgaaggagaggtaagcacatagttttagctagttttttaagtttgtgcaaggatagtgttcttgaattacgttttcacactcattcataactgatacggtattcccattgtctgtttctaaaataatataaaactgtgcttcattgccttttaggttactgaactttcgccagaagaagctgagagtacaacaagtggatatggaaaaagcattagccatgtaatcataggtctgaagactgtaaaagggactaagcagctgaagttagatcctacaatttacgatgctttaataaaggaaaaggtttacttcctgatcctcatccttatgtcgtgtgctagactttaaaaatacatttctttcatgttttgaaatttgagtttgtttgtttcttattcaaaagaatgccttctgttgaatatttaatatatcgtacaaactttggagaatgttacttgtagaaatttgcatgattgacttcagatactctactgtgtaagaactcataacttatcactttggactggagctgattagatccctcggtactgagattcatttctgttacttccattttctgcacaagatgtttcatatttatcatcagctatctgtgggatgcaggtggcagtgggtgatgttatatacattgaagctaatagtggtgcagtgaaaagagttggtagatgtgattcttttgctacagaatacgatcttgaagctgaggagtatgttccgattcccaaaggagaggtccataagaaaaaggaaatagtgcaggtaatttgatgaatctttgtcttaaggatttttgcccatacattttgcacagtcaactcttctttgcattgtgctatccattaattaatgttgttgataatcgaagaaataaatgtatcgtgtattcgtgtttaataaatttgaagtacagtgtcaaatgtcgacgtttagaagattgaaagtagagctatggtgcattttgtggccatcacaccttgtctgaatagaggggattacgaccaagtctgacacctttatggagaattgaacttacatccctgctaaacaaaaataaataagattttgtcttattcacctaactgtctacatttgtaattgtacctccattggtaaataatttcataaggttaacaaacaaacactaagattttatcaaatccatgacttgatgtcttactaagacgtattataatccttggagtcattaggttaacaaacaaacactaagattttatcaaatccatgacttgatgtcttactaagacgtattataatccttggagtcattaggtttgattaattattgttacatctgacaaaggtcaagctgtatgatttgcctttttatctattatctctcaaacattatattcttttactgctgtataagaaaatttgttctcatatgcagtgttagtgcattcaatctttctgcttatggctcttaagttatatggaagttaatgaatataggaaaacttctcctgtcatttatgtacaggatgttacacttcatgaccttgacgctgcaaatgctcaaccacaaggaggccaagatattttgtcccttatggggcaaatgatgaagccacgaaagactgaaatcactgacaagcttcggcaagaaatcaataaggtttttcagtttctgattgagcggcacccattctttgaaactggattaaatttaatgaacattccaggatcgatgtatgatctttaatctttatattgcattttagtaggtggtcaacagatatattgatgaaggaattgcagagcttgtacctggtgttctgttcattgatgaggtatcttcttattttatccgtatgattgaaagtttactgctctcagtgggctaattttggagtcagaaagtacaaatatgaatgatggtgtgtttatatgttgtgaagcatacagtgtcttgtccttgtgaagcagtgccatgctgtataacttatttattactattgttctactatatggtagaaatatgtcttaatgttgtttgatttaattacttattattgttaggaactttaattgcaggtccacatgctagatattgaatgcttctcttatcttaatcgtgctctggagagcccattatcaccaattgtgatacttgcgacaaatagaggaatatgtaatgtaaggtaaacggtttgatttaccgctcgaagcactctgtcacattgcagtaccagagtaatactgcgtctatcagtttgtctattactatgctccttaaagttaacaagtcttttatatacttgtgtgaatgtgtccagaggaactgatatgacaagtccgcatggtataccagttgatcttctagatcgattggtgattattcgaacagaaacatacggtcccactgagatgatccaggtttgattttgggtcttatatcagttaggctttttctgtctagaaatgtgtgtgattcttgctcatcgccgtttgcagattcttgctattagagcacaggtagaagagattgagatcgatgaagaaagtcttgcatttttaggagagatcggacaacagacatctttgaggtatgattcttaggctgagttattatctccactttcccaactcacttccctcgttttccacgcgcacgcttttcaaactgctaaacggtatgtcttttgcaaaaattttctatgtgaaagttactttaaaaaaatcatgttaatccatttttcaaatttattttagctaaaacttaattgatcatgcaccaaacgctgcttcgttttgggtgctagggggtgagggttcccacccctcactcccgaacacacccttagttgttattgtaaaaggtaaaagaataggtcgctttgtgctcaccacactgctgctttttggttgttattgttcctcctggctatgcccacaaatttgcaaaagatagttaagctgaaacgttgagtaaagggaatatgttgagtggaccggtcttaccttccagtttcagtgttctactataagcatttttaattgagattgctactgatgaacgactgtatatcttgaatctcttgcaggcatgctattcagctgctatcacctgccagcgtagttgcaaaggctaatgggagagaaaagatcagcaaggtatgtattgacatttcatcaggatatattgtaacatcctcttcgcctcttcgctcctagagctgctacctgcacttatattgtgatattattcttactatcttacacacggtgaactcatgacctttaccaggccgatcttgaggaagtcagtggtctgtacttggatgctaaatcgtcggcgcgtctccttcaggagcagcaggaaagatacatcacctaagatctcttgctgtacgacgatgtatttgtccttagtcattccgctggatctctgataacttggtactaaagtgcgaagacttctttagggcactggattgatttatgcggaaatgtagaatccgaactctgtactcccgccaacctctagaggaaaacttgatttcggcatattgcttgttcacattactccttgctgagtagattgcatatgaattatcgtgtattttggtttcccatgctaattagttccagattccgtttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0837500, RefSeq:Os01g0837500