Os01g0839700

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Revision as of 05:09, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0839700| Description = Similar to Ubiquitin carrier protein| Version = NM_001051290.1 GI:115440950 GeneID:4327386| Length = 6211 bp| Defin...")
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Gene Name

Os01g0839700

Description

Similar to Ubiquitin carrier protein

Version

NM_001051290.1 GI:115440950 GeneID:4327386

Length

6211 bp

Definition

Oryza sativa Japonica Group Os01g0839700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37773105..37779315

Sequence Coding Region

37773512..37773589,37774029..37774106,37774909..37775009,37775094..37775191,37778801..37778903
,37779023..37779074

Expression

GEO Profiles:Os01g0839700

Genome Context

<gbrowseImage1> name=NC_008394:37773105..37779315 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37773105..37779315 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggctaccatcagccaggcgagcctcctcctgcagaagcagctgaaagatctcgcgaagcaccccgtggatgggttctcggctgggttagtcgacgacagcaacgtcttcgagtggcaggtcacaatcatcggcccgcctgacaccctatatgatggaggttactttaatgcaataatgagctttccacagaattatcctaacagtcctccaactgtcagatttacctcagaaatgtggcatccaaatgtttatccggatggacgtgtatgcatttctattcttcatccgcctggtgatgatcccaatggttatgagcttgcgagtgagcgttggacaccagtgcatacggttgagagcatagttctgagcatcatttcgatgctttctggtccaaatgatgaatcaccagcaaatattgaagcagctaaggaatggagagagaagagggatgacttcaagaaaaaggttaggcgccttgtaaggaaatcacaagaaatgctctga</cdnaseq>

Protein Sequence

<aaseq>MAATISQASLLLQKQLKDLAKHPVDGFSAGLVDDSNVFEWQVTI IGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISILHPPGDD PNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRDDFKKKVRR LVRKSQEML</aaseq>

Gene Sequence

<dnaseqindica>5727..5804#5210..5287#4307..4407#4125..4222#413..515#242..293#gtgcttcccattttatccgcctgctctgctgctccacattttctccctctttccttcccttatcgtcctctctctccttcttcctttcctgattcatctcgccgagctctcctcgtcgcctcctccgtctctctataaataaggcgccccacggcgcctatcgattcgcgtcgccgcttcctgcagaggccgagaattattctcctgcgcccgccgcaaaaaccctagccacgccgatctcatggcggctaccatcagccaggcgagcctcctcctgcagaagcagctgaaaggtgcggatccatgcggctcgcttcgtcctcgttcgtcggtgttctgtttgcgccccttttttttcatccgtggattgatcgatttcggggttgggtttgtggtttggtgattggtgcagatctcgcgaagcaccccgtggatgggttctcggctgggttagtcgacgacagcaacgtcttcgagtggcaggtcacaatcatcggcccgcctgacaccctatagtgagttggattctctctccaattcgatgcatgcttccatgaatcatctgcctcatccgtgttcatgccatgcgagtggagttttttcgtgtatacccgcgaattggaggcagaatcttgaattcgtttctaaccgtggcttgaggttggcttccgattgaattttgcgatgattttaggttcttggaaggtttgcatagctaccacagtcctacgactagctttcatggttgatgcccatttcaatgagtttggtttgaactggatgtgtggatgaggcatgggtagctcgttttgcaggatgggtttgttgaagtggtggcagtttgcatgttcacatttagattgcgcatatttctatatgcatatgtgtgggtaaaggttcatgacagtctggggtcagattcttaaactacatcatggaaatggaaacctatgtatcgattagactgactgtgtttttctattaatggggataaactgggcagctcatgttctcaatgtaagagtttatgccctcataaaattttggggaagatatgcttcagcttatttattagtgctttcttgccggtaattgacctggcaagtttttcactcttgtttcaagtagtaccgatgtatcaaccaagttacattctaatttcatctggtgtttggtgcatgaatggatttttctttcgtagaatttatgtttaaaatccagaaatccgtccagagcagctagtttgcactattggaccacatgctggaaatacaatagtccaatctaatgagtgataaatggattaacataaaggtacagggatgctgttttaggaaaggaacccgaagaactggcagtaggttcaactcaacctgcatgtgacataattaaaactagctgaatttccaatgcaatggggatagactattagatatacaatcgcatttgctatgcatctttcaggtttatttgtaaaattacaattgccatactgctgttttaattatgtaatagatggagtaatgagtgtggttactagttgcaaactacaacaccacatctattatattattaagacagctcgaaaagaaggcaccacgttcaccgtggaggctagaaattttcacattaatcggggaaaaagaaaaaacctacaccgttagatcataacaaatctagactataagggttgagatttaatcaaaatatatgtaaaagcttgactctttgactttttgaatcggacacgtgaaagagcgtggaactagaattttggtgcatgctatgcagtagcctttgaaatcaaaatcaaattaggaaacttaatttactgacacgagacaaacacgtcatgtctgcatagcaaaattagaaatcataaatatgcacaactgtgacacgtcctgtacaaaatcatgtgtaggggagacaaaacaactgggcatccaaactccttcaaccacattcaagttttgcactatcgcataatctttagagacaatatgtttttttaaaataaaattcttagtaacaagattccctaatagctttctctgtatttagggtccatatgttatagctcatactccgagaatggggcaatgctgagaagcggcggaaatcaccatattaataataaaaagtgaagtatttaaaggatctaaattttaatggtgtatattgatcgatgtagttttatataaataaaatattctatctattattttaataaagtaatgtaaaaagaagtctctacgtttgctctcaagacttacaaattctcggattaaaaaatataagcagttggatcatggtcatgcctgtaaagaaattgagtggtgacggttgatgggacatctacaaatttgaaaaaaaacccaaatagaatcccaatgaggattaagagggggaacgatggatagatcgttatgcggtatggttatagcggttggctggacttctagaaagaaacaaaaaataaacccaatgataatcatgtacaatttttaaaatatcaaaaacaataaagaggggaggcaacaggcgagctgtagatgagtacattggcaaagccattaacggattggcggaacttctagaaagtaaaagctgaactaacacgataattatgtttgtttttttaaaatcccaatgaaaataaagagaagaggcagtgggcaccccataaaggagtacagtggcggtgtttaacaggacttctaaaaattatagaagagttcatgcaggaatacaatttataaataaaatgccagaataaagaatatagaattttcaaaaaaaaaagtccatctagaatacaatgatgacaaatgataataaaaaggagaaacaacatgcctgtaaagtagtagatgacggttgatggtacatctaaaaattataaacagaactccaaatagaatcccaattaagattaagaggaggaacacagacatgttgttaagtagcactgtcacaacgtttgaggggaggcagcgggcgagccatagaagagtacagtggcaaagccgttgatggtttggcaggatttctagaaattaacaaataaactccaatgataatcatgtttaaattttaaaatatcaataataacaaagaggggaagcagtggacgagccgtagaggagtacattggcaaagccgctaaaggtttggcgggacttcttagataattatgttcgaattttaaaatcccaatattaataaagagatgaggcagtggacgggccgtagaggagtacaatggtagcgtttgacgggactttctagataattatgttcgatttttaaaatcccaatgttaataaagagaggatagtggactggccgtagagaagtacattggcagcatttgacggaacttctaaatattataaaaatgaaaccaaacaagccaataaactctaaaaactacaagatataatttttaaggttctaaggagaatgaatagaagcaatagtagatcgagcaagcaaataacggagatgtgacaaaggagtaagtggtagcgaccgacgtgactcttataaactataaaagtagaaacaccgagatgataaggttcggtccaatgtcccaagacaacgagatagttgtttaacaaattttaagtaaaatcatatgtaaaagatagatagttttgtacggatgctagccgcgcaattgcgcgggccacccagctagttatttgaaagaaaactaaagaatagtctcggtaagcttaaaatggaatcgtgcactcttgtcagggagcttgcatatgcgttcaatatattttctactttcaaataatgcgctctttggtgttttcttggcttggacagaaggattctttacacattaaacgaatttactggtttgcttgttccatggtccagaatctcaaatgtgtaaacatttgatatgagctcaaaatgagttagctactatggtttaaacttctagtaagtggtaactgataacagtccttatttcagatatagagcccttttcatgtgcttgctgatttgtcatctattcatctttggtgtttgggctgttagcttgatgatctaaactgttctttctcaaactgccttgtgacaatgacatttattttcagtgatggaggttactttaatgcaataatgagctttccacagaattatcctaacagtcctccaactgtcagatttacctcagaaatgtggcatccaaatggtcagctttcctcattgtaacttcatgtttctgtaactccatgatccataattttaacacagcataatattggtcaattgccagtttatccggatggacgtgtatgcatttctattcttcatccgcctggtgatgatcccaatggttatgagcttgcgagtgagcgttggacaccagtgcatacggtacgaattatggtgtctatgatgcaagcaatttcttcccttttcattctgttctgcactagttccattttgttgacaacttgacatatattctgcgtggaggcctggagggtattgtctgctgaattttcttacataaataatcaataagctttgacaaaggaaagagcttgtgatgcaaatttgggagtttgttaagcatctgcaatgcaatacacgggcataacaccacactgcaaatatttcctaaaattgtgaacaatgatgatggctttgttttgcattttggatattcatgataacttttttgccttccacctagagtttcgtttttgtaatccttttatctctaatattgttactgtaaagtgcaatgcgttattttctttggactagcaagttattaaacttgcataagaatctttgtgcatctgatattatctagttcagatagtaaatcctttcaaacttcaaagtataagaagccttatatgtagagttggtgtaaccttcggtaatttatagtatgatagcttgaaacatcactacaaattccatcgttgacatatcaaactcagcttctggtatactgaaaagtcaaaagtaattgtagcatttgaatcttgcatttgaataatagtcatattttgaacaatgctgcaaagttacttgtttgttttgtcactgatcttgtcatgatcatatgtttatcttctctagctttttgtaagtagccattttttactgtctaatcatcatattcctgattcttgtaattttaatgagtgttttccatttacaggttgagagcatagttctgagcatcatttcgatgctttctggtccaaatgatgaatcaccagcaaatattgaagcagctgtaagttcacttaacatttgctatggaaattgagaactctgttcctcctgggccttggtgtatatggcattttatctgtcacggagggatgggggaagagttgaagtacttgtcaatagggaaaacacagagttggcagatcctacaaaataatctaacttccagtccaaaaaccatttaactttattatcaacatttgcatactggattctgcatgtacctttcatcttagatattcacctatttatttggttagttgcagccctgagaattttctcaggtactgctatagtccttgaaacatctgtgaatttacacaccagacatttgaatgactttttaaacacacagaaaattgtagtcaggacaatgcgtagtgtattttgcctgctgtttggtggacctttgttctgaacttctgcctactgttcttgcgcagaaggaatggagagagaagagggatgacttcaagaaaaaggttaggcgccttgtaaggaaatcacaagaaatgctctgaagaaaccggcagtactggggaaagttaaccataccacgtcacatgtgcatgatttggctgtcgatttccaaatgtcagttgacactagcaattcacttctccccctctgtacttcccatagtgtgcctggtggtggtcgcggtttcgtctcccaggaaggctgaatagcactgggacatgtttgtcacctattctaaagctctggttgtatttgtgtggcttgggctgtaaacgttgagaaactttgaaatactgccactcatcacaattttcgtaacaaacgtcatataagcaggcacctgcctgatctgctagctgttgaacgttgaaacacaatgtctgcaaactggtttcagtccgttctttgtaatatgttcttataaatggagcaatactcggtgctgtac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0839700, RefSeq:Os01g0839700