Os01g0846600

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Revision as of 05:10, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0846600| Description = Protein of unknown function DUF248, methyltransferase putative family protein| Version = NM_001051326.1 GI:115441022 ...")
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Gene Name

Os01g0846600

Description

Protein of unknown function DUF248, methyltransferase putative family protein

Version

NM_001051326.1 GI:115441022 GeneID:4327468

Length

5692 bp

Definition

Oryza sativa Japonica Group Os01g0846600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38124095..38129786

Sequence Coding Region

38124357..38124561,38124836..38124913,38125273..38125395,38125794..38126051,38126502..38126661
,38127290..38127400,38127747..38128017,38128102..38128251,38128971..38129678

Expression

GEO Profiles:Os01g0846600

Genome Context

<gbrowseImage1> name=NC_008394:38124095..38129786 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38124095..38129786 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagcccctgggcgcgcacggcgccgacctgctctgcggcccgcgcgtcctccgcgctgcggccctcgccttcgcctgcgccgccgccttcctcgtcggctaccactggtccgactcctccccgcgcctgctcttcttctcctccaccgcctcctcctcctcctcgccgctcctctccaccggctccccttccgtcgccgtctcccccaacgccaacctctccttcgacccctccctgatccccacccctgccgcctccacgccgcctgcttctcctactgccaatgcctcgcccccaccttcgctgccgccgcctcctcctcccctccgcccccctccccctcccgcccgcctcggcatcgtcggcgaggacggcgcgatgcgcgacgacttcgacgtcgtcgtcggcggcgccaacgacaccgatctggccgccaccgacgaggccctgccgcaggagccgaccgacgcgggccccgccgtcgggagcagggttcggattgggaggttcccggtttgtcctgagagcatgagggagtacataccctgcctcgacaacgaggaagagatcaggaggctgccctcgacggagcgtggcgagcggttcgagcggcactgccctgccaaggacaagggtctgagctgcctcgtgccggcacccaaggggtataaggcacccattccttggcctcggagcagagatgaggtatggtttagcaatgtacctcacacgcggttggttgatgacaaaggagggcagaattggattagtaaagctaaggataaatttagatttcctggaggaggaactcaatttatccatggagcaaatcaatacctggatcagatttctcaaatggtaccagatattgcatttggctctcacactagagttgccctggatgttggctgtggagtagcaagttttggtgcatacttactttcacgtgatgtgttgacattatccatagctcccaaagacgttcatgagaatcagatacagtttgctcttgagcgtggtgtgcctgcaatggcagcagcatttgcgacacaccgattactatatcccagtcaagcatttgacttaatccattgttcacgctgccgaataaattggacccacgatgatggaatcctgcttctggaggttaatagaatgctcagagccggcggttattttgcttgggcagcacagcctgtttataagcatgaagaggctcagcaagaagcatggaaagagatggaagacttcactgcaagactctgttgggagcttgtgaagaaagagggatatattgctatgtggaggaaaccattaaataactcatgctacatgaaccgtgaccctggggtcaaacctgcactttgtgatcctgatgataatccagatgatgtctggtatgtcaatctgaaagcatgtatcagccggcttcctgaaaacggtgatgggctgactccctttccatggcctgcacgtttaatggagccaccaaaaaggcttgaaggtgttgaaatggatgcacactcatcaaagaaggagcttttcaaagcagaaaccaaattttgggatgacattgttgaaggttatattcgtgtttttaagtggagaaagttcaaactccggaatgtattggacatgagggctggatttggagggtttgcagctgcattgattaatcgtaaacttgattgctgggtgatgaatgttgttcctgttagtgagccaaacacactgcctgtaatctatgaccggggacttcttggagtggctcatgactggtgtgaaccatttgatacatatccaaggacatatgatctgctccatgcgtttagcctattctcgaaggaacagaaaagatgtaacatctcaagtatcttgctggagatggatcgaatactcagaccaggcggtagggcttacattcgtgacctaaaacaagttgtacaggatgtcaaagagataacaaccgccatgggatggcgatccatcatgcgtgacaccgcagaaggcccgtatgctagcaggaaggttttgatgtgcgacaagccgatggtgcgttag</cdnaseq>

Protein Sequence

<aaseq>MKPLGAHGADLLCGPRVLRAAALAFACAAAFLVGYHWSDSSPRL LFFSSTASSSSSPLLSTGSPSVAVSPNANLSFDPSLIPTPAASTPPASPTANASPPPS LPPPPPPLRPPPPPARLGIVGEDGAMRDDFDVVVGGANDTDLAATDEALPQEPTDAGP AVGSRVRIGRFPVCPESMREYIPCLDNEEEIRRLPSTERGERFERHCPAKDKGLSCLV PAPKGYKAPIPWPRSRDEVWFSNVPHTRLVDDKGGQNWISKAKDKFRFPGGGTQFIHG ANQYLDQISQMVPDIAFGSHTRVALDVGCGVASFGAYLLSRDVLTLSIAPKDVHENQI QFALERGVPAMAAAFATHRLLYPSQAFDLIHCSRCRINWTHDDGILLLEVNRMLRAGG YFAWAAQPVYKHEEAQQEAWKEMEDFTARLCWELVKKEGYIAMWRKPLNNSCYMNRDP GVKPALCDPDDNPDDVWYVNLKACISRLPENGDGLTPFPWPARLMEPPKRLEGVEMDA HSSKKELFKAETKFWDDIVEGYIRVFKWRKFKLRNVLDMRAGFGGFAAALINRKLDCW VMNVVPVSEPNTLPVIYDRGLLGVAHDWCEPFDTYPRTYDLLHAFSLFSKEQKRCNIS SILLEMDRILRPGGRAYIRDLKQVVQDVKEITTAMGWRSIMRDTAEGPYASRKVLMCD KPMVR</aaseq>

Gene Sequence

<dnaseqindica>5226..5430#4874..4951#4392..4514#3736..3993#3126..3285#2387..2497#1770..2040#1536..1685#109..816#agtccccggcagtgcacgatcccatccctcccgcatcggcaaggcaccgccgcgccgaccgctctccgcaccgcgacgcgacgcgacgcgaggcgaggcgaggcgagcatgaagcccctgggcgcgcacggcgccgacctgctctgcggcccgcgcgtcctccgcgctgcggccctcgccttcgcctgcgccgccgccttcctcgtcggctaccactggtccgactcctccccgcgcctgctcttcttctcctccaccgcctcctcctcctcctcgccgctcctctccaccggctccccttccgtcgccgtctcccccaacgccaacctctccttcgacccctccctgatccccacccctgccgcctccacgccgcctgcttctcctactgccaatgcctcgcccccaccttcgctgccgccgcctcctcctcccctccgcccccctccccctcccgcccgcctcggcatcgtcggcgaggacggcgcgatgcgcgacgacttcgacgtcgtcgtcggcggcgccaacgacaccgatctggccgccaccgacgaggccctgccgcaggagccgaccgacgcgggccccgccgtcgggagcagggttcggattgggaggttcccggtttgtcctgagagcatgagggagtacataccctgcctcgacaacgaggaagagatcaggaggctgccctcgacggagcgtggcgagcggttcgagcggcactgccctgccaaggacaagggtctgagctgcctcgtgccggcacccaaggggtataaggcacccattccttggcctcggagcagagatgaggtgcgcattggtgttctctctttcacattttgacagtgtgctgtaaacaaaagttttgatagtgtgatgcatacaattcttcagtgtataactctatgccctatagtactaggcatcgagtataacatgcaaggtattcaaaaattgatggattgcctttggattttccgaacgtggaacatggggtagtgtttgattttgtgggttattactagcattgtagcaagctcatactgggttttctgtttgctaagtagaggagatgtcttctgattctgccatcagtatgaagtatgaattcaaattaactagagcatgatgaagcagcatttgaagtacagcattttatttaatgcaaaattaaatactccctccattccaaaattccaaaatataaggcataaccacccttaacccaaagaccaagaaacaattacgatcacctcctagtttggatcaccgtaacaaatgcaatgcatgcacccaatagaattagagatcttgagtgtggaggatttaaatataataattgaatagagaggaggtgctatttaattgcatgcatgcatgcacacctcatattatgaaatatctgaaaaaagtagttgtgccttatattatgaaatggagggagtataaccaactgatttggtttaatttttcaaagacctctgggttcaggtaaaggagtttctataacacactttgatgaattgcaggtatggtttagcaatgtacctcacacgcggttggttgatgacaaaggagggcagaattggattagtaaagctaaggataaatttagatttcctggaggaggaactcaatttatccatggagcaaatcaatacctggatcagatttctcaagtatgctgattgtacttttatctgatgaaaattttatcatgttgctgactctcagtagcaccacctgtctctctgttcatccagatggtaccagatattgcatttggctctcacactagagttgccctggatgttggctgtggagtagcaagttttggtgcatacttactttcacgtgatgtgttgacattatccatagctcccaaagacgttcatgagaatcagatacagtttgctcttgagcgtggtgtgcctgcaatggcagcagcatttgcgacacaccgattactatatcccagtcaagcatttgacttaatccattgttcacgctgccgaataaattggacccacgatggtgagcactcactttgatgtaaagttctacctttttttttcttagttatgcgtttgagcaaaggcaacatatttaaggagtatttaaggagctagtctgaattcattcctacggcataagaaaaatattttattcaaataatgactggaagttcctttattagaaaaatagacatgctcaaggcactcaaacattgcaaagatagtgtgttatttttagcacgtgaagacgctttttcatccaatgattgttttcaacaaaatatcaacacaaagataactgttttttgtagcaccctgacttccaatttgcttaacttttgttgccatgatttgccactttaaagatggaatcctgcttctggaggttaatagaatgctcagagccggcggttattttgcttgggcagcacagcctgtttataagcatgaagaggctcagcaagaagcatggaaaggtatgcattatttcctatgtacccctagtaatttttgttccattgtgggggaaacacactagtctttcatttattctgttggtattttcccacatgacgaattcatatttgttcttgtcgtttgcatttttagatttatgacagctgctcttttattcctcattcatgcattgccgttctttccttgtttattgtgttgtgtatcagcattatgtttcatatgctttgaagtttgaatcaacctcctattatggtctggaatgacatatgtcaaattttacgatatctggagtgattcatatggttatgtatacacagtaatttgaagaaaaaaattaatgcaaaatgtttaatatgcatggatctccagattaaatccatggcaagcctgaggcattcttccacgtgaagtaaagtaaatgcaaagctaaactacaaattcttttcatttctagaaaccaactaaagctgcagatttttgttatgatgtatcatgtctagaaatatgaatgtattgcatggtttttatcaggattacataatatattggtttgacaggcttactttgaatgaagtgctttttttggtttgttttgaaagaattgcttgtgaacaaaattatgtgtagagatggaagacttcactgcaagactctgttgggagcttgtgaagaaagagggatatattgctatgtggaggaaaccattaaataactcatgctacatgaaccgtgaccctggggtcaaacctgcactttgtgatcctgatgataatccagatgatgtctggtatgtttcgacctcattttgtcctgtttttattgatgaaacctcaatgtaccattctaaatctatgtctttctggctgcaatcgtattggataaaattttaacagtcacatgtgctattggaccataaaaatacatcaccattcactacagtttgtctatataatattttaatatcattgatttatgatgggctagatggcaataatgttttctttttgcatcatcattggttagatctgttaaaccattcaccattaaaacctcataaatgcaaagcatattatcaacaaaatctgtgataatggctattcatttttctggttatgtagattatactacatcattcagaggccttagctactgtttgattggactgttgtactgctgttatgttttatttggcatgaatcttttttgtgctattctttatgttctatttctctttcaggtatgtcaatctgaaagcatgtatcagccggcttcctgaaaacggtgatgggctgactccctttccatggcctgcacgtttaatggagccaccaaaaaggcttgaaggtgttgaaatggatgcacactcatcaaagaaggagcttttcaaagcagaaaccaaattttgggatgacattgttgaaggttatattcgtgtttttaagtggagaaagttcaaactccggaatgtattggacatgagggctggatttggagggtattttatctttctttaaggccttttcttcactctgtccattctctttccatttcaaattacctcagacattgattagtatccgatttccatgcctttaagtacagatgttgataaaatatatacaatgacttggaggtctagtggatcacaaatctgcttatgtcgttgataagttgatattagtaatatgtcatctgttttctttggacacttattgtacatagattctatgccacttagttatttcaaccgtagtaaccttctgctctgacactactatactaggttacagaggttctcacaaagacaaaataaattggacttattttctgtttggtgcgtgatatattctgttttgcgcaatatctcattttgcttgctaattttttatgcaggtttgcagctgcattgattaatcgtaaacttgattgctgggtgatgaatgttgttcctgttagtgagccaaacacactgcctgtaatctatgaccggggacttcttggagtggctcatgactggtatgcatttttatattctgtggctctcttattagggtttttgttctatttataatttataaatgttcctcctgaattatattgtactgcaacccgtaatgttcttaatagagcatactagtgaatagtggtcacttgcatcttctttctccttgccccgtgttcttgtcgaacttgaactccagtggtcaacagtttgattataatgcttctcattgacgtgtttcttgtttatttagatatcaatgtttgtttctaagcagtggtgattagatatttggtgttattaaactaaatctacaaaattttacctttaaatattgctcatgctgccatttttgtgccttccttatcgacaggtgtgaaccatttgatacatatccaaggacatatgatctgctccatgcgtttagcctattctcgaaggaacagaaaaggtagcagttcttttgataattaaattcgagttatgttcctgtttatttttctcccaaacacctgtgtgcctaaagaaatatccacacttatgtgccccaacaatgtgactataaaaatagctgaacaggtgatctcatgctttatcgatacattgcaagatacaaaaatagtattcatgctcattcctttctacgttcttgactatgctgctaaagataccactgagttctggataaacagtgcgtctaactgtagtatctctgttgttaccagatgtaacatctcaagtatcttgctggagatggatcgaatactcagaccaggcggtagggcttacattcgtgacctaaaacaagttgtacaggatgtcaaagagataacaaccgccatgggatggcgatccatcatgcgtgacaccgcagaaggcccgtatgctagcaggaaggttttgatgtgcgacaagccgatggtgcgttagccgatcaggctggtccagagcaatgatgcgagccctggttttgttttccggagccttttgaactgactaccacagctactacggactggagattgacatctgtttcaatacatagggataggtgaatgccaaagttgtaactaatcaatttgattcgtcattcgtttgtacaacgactgatgtagcccctaacgattggcttgtttttgttgtatcatccacacaacagtaattatgaataggagttaggaaggtttttgag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0846600, RefSeq:Os01g0846600