Os01g0847900

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Revision as of 05:10, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0847900| Description = Prenylated rab acceptor PRA1 family protein| Version = NM_001051336.1 GI:115441042 GeneID:4327478| Length = 2840 bp|...")
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Gene Name

Os01g0847900

Description

Prenylated rab acceptor PRA1 family protein

Version

NM_001051336.1 GI:115441042 GeneID:4327478

Length

2840 bp

Definition

Oryza sativa Japonica Group Os01g0847900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38175874..38178713

Sequence Coding Region

38176335..38176438,38176512..38176583,38176699..38176787,38176881..38176967,38177453..38177531
,38177631..38177671,38178375..38178532

Expression

GEO Profiles:Os01g0847900

Genome Context

<gbrowseImage1> name=NC_008394:38175874..38178713 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38175874..38178713 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggactggagctccgtgactgcggaggatctggtggacgcgctgcgggaggtggactggtcgacgccgccgcgccccgtctccgagttcttctcccgcttcaccgccccgcgatcctactccaagtggaccagccgcctcaagtgcaacctctactactacaggacgaactacttcatcttgatcatgttcattcttgggatgggctttctccggaaaccagtttccatccttgcagctttttcaacaggcctcagcattgcatttctcaatgacagttttgcagttacattcaatgagaaagtcacaaggacagtcagacaattttcaccacatttagcagcaaagatgaggccacccttaagacctgtcattcgtggccgaccaagctcaaaaagatcaattcatatttgtggccggcctcgatgggtttttgttgtattattttctgtcgtaagctgcttcctctggatgacctcatgtagtctccttacggttctgtgggcactaattgttggtctgcttgcaaccttgcttcacgccagtttcagaacacctaatctgaaagcacgcctgaacacattcagggaggaatttcgagcagtatggcggaattatagcgagttttaa</cdnaseq>

Protein Sequence

<aaseq>MDWSSVTAEDLVDALREVDWSTPPRPVSEFFSRFTAPRSYSKWT SRLKCNLYYYRTNYFILIMFILGMGFLRKPVSILAAFSTGLSIAFLNDSFAVTFNEKV TRTVRQFSPHLAAKMRPPLRPVIRGRPSSKRSIHICGRPRWVFVVLFSVVSCFLWMTS CSLLTVLWALIVGLLATLLHASFRTPNLKARLNTFREEFRAVWRNYSEF</aaseq>

Gene Sequence

<dnaseqindica>2276..2379#2131..2202#1927..2015#1747..1833#1183..1261#1043..1083#182..339#aagccacacgtcgccgaatccgaacagctcttccacgaaccacttgcccctcctcacgccctctcctcgtcggtttcgaaccatctagaagcgtcgccgccgactcgccatctcctctctaggtcaccggatttcctagccggcggcgagctcgtcggctcaggcggcggcggcggcggcgatggactggagctccgtgactgcggaggatctggtggacgcgctgcgggaggtggactggtcgacgccgccgcgccccgtctccgagttcttctcccgcttcaccgccccgcgatcctactccaagtggaccagccgcctcaagtgcaacctctactagtaagtagtacggcttctatctcgaatctacctcccacctctgtgcctctcctcacgaatcgaagaatgagtgagctagattggttggcccactgtgatttgggttaaatcgggttggaatagggggcgatgcatgaggtgccaactgtttagattcatttggaacgatacgttagctgctgcagagatgtttcacatttaatgtgtgtagggcatcgatctgaattctacttttggagttaaacgtggaatctagatttgattataacttgttctgtgaggtgtacgtttgctgataattctagttaggtgtagctcactaaatcgtgacttgaaatttattggtagcttggctacatcatggaattttatatgtgagacttaggggagtataaaaggtgcataatcaaaacttccgtgatgtttccatattatagtaaaccacacggttatcctctgagtgtgatacaatattttgtatggaaccgatgatcaacagtaacctataatcatagaatatgtgaacaggtactttgattttaacgtgtaaataggaaggcagcatatcgatattatttaggaatagaacctggaagttcctctaccattttacattagaacttatattgtaaatacatatttgttttgtaccatgttacatctttcaacaaagttaatttccaacgtttttgctggtttgcagctacaggacgaactacttcatcttgatcatgttcattcttggtaggcagagagacctctatgtgctgtactcccccaacccccccatccctactatttttttgactttcatatagtcatcttgtgtctctctttttgcagggatgggctttctccggaaaccagtttccatccttgcagctttttcaacaggcctcagcattgcatttctcaatgacaggtaagtttggattcaattgaaggcaccgttagtgctcttgggaagaaagatattttgcactttacaagctgttcttcctttaacctgcaaatgtgacattaacccctatttcgcatgtcgcattccttccaacacataaatgttgtttgattttgaatctgctaagcatctgctgttattattatcaatggatatagattgggagacatctgcatttcatattttagcttaagggctcatatcagcactcttgcaccagttatatgttaacaacttaacactttgttttttcttccccttaatgaaatgatacgctgttcttctatgtttttgagaaaaaaaaacttaacactcattagataactgacagattttatgctcatatgtgtatttctgtagtcaattcctatgtttgtccactccactagaaatagtgatactcccactagaactgctttttcaaatgattcatgtttgatatgcagttttgcagttacattcaatgagaaagtcacaaggacagtcagacaattttcaccacatttagcagcaaagatgaggccacccttaaggtggggatcctctccccctatttcttctataacattcttctttttttaaagagtctcagaagaacgggctaacaacattgctgatatttgcagacctgtcattcgtggccgaccaagctcaaaaagatcaattcatatttgtggccggcctcgatgggtttttgttgtattattttctgtcggttagtataaagcactgacctccatacatactattctagaccatagttttttttttataaaaaaaacaactaaataaataatgaactcaacatataatttattttatttttgcagtaagctgcttcctctggatgacctcatgtagtctccttacggttctgtgggcactaattgttggtctgcttggtaaggccaaacttgaggtttaaaattttaaaattgtgcatgtgtgcctaatatataagtttgtgccttgcagcaaccttgcttcacgccagtttcagaacacctaatctgaaagcacgcctgaacacattcagggaggaatttcgagcagtatggcggaattatagcgagttttaaacgccctttttgtctaccccatgtgagtgccttcatcgctgtcttatggtcgaaaattgaatctagcgaagggcttaaagtgctacctgttctgtcagtgcatcattgtggagctgcttattggatgtctctgcggtggtgcaatgtagaaggacctacttcagtgtgctttcgaatttcttgattttctctgcagatttatgtggtaaaaatgttaccaagttccatatctctgctgcctcttgcgactctttaattgtgggagattaaaaataggcatgctattttctccagtttatggatttggctttagattgtggattattctagtcccccaccacatggatctccatagttttagcttctggtccaaaacttctactgtattttgatacattggggaaggaacagcatgtaaaagagacagctatcctgaagagaagaaaaaagatattgttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0847900, RefSeq:Os01g0847900