Os01g0851600

From RiceWiki
Revision as of 05:10, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0851600| Description = 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein| Version = NM_001051357.1 GI:115441084 Ge...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0851600

Description

3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein

Version

NM_001051357.1 GI:115441084 GeneID:4324809

Length

1111 bp

Definition

Oryza sativa Japonica Group Os01g0851600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38422812..38423922

Sequence Coding Region

38422966..38423772

Expression

GEO Profiles:Os01g0851600

Genome Context

<gbrowseImage1> name=NC_008394:38422812..38423922 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38422812..38423922 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcggcggcggcggcgacgacgcgctgtacgcgcgatgcctggtgatcctgtacctgatcagcccgatcaccgtgttcctgctccggttcgtgtcggcgccgtacgggaagctctcccgccccgggtggggtcccgccgtgccggcggcgctcgcgtggttcctcatggagagccccaccatgtgcctcccgcccctcgtcctctccgccgccgcctcctcgtcggcgctgcgcgccgccgctctcctcccggccgcgctgtacgcgctccactacgtgaaccgcacgctcgtccacccgctccggctcctccgcctccgccgcgcgccggcgcccgttccgatcctcgtcgccgccttcgccttcggcttcaacctcctcaacgcctacgtccaggcgcgctcctgggcgctcgacgccgccgctccccacagcaccgccaccgccaccgccacgcccgcggccgtcgcccgctgcctcgtcgggctagccctcttcgcgtgggggatgcggaccaacatcgcggcggacaaggcgctcctgaggctgaaggaggccgggaaagggtaccagattccccgcggcgggctgttcgacgtggtcacctgccccaactacttcggcgaggccgtggagtggctcggctacgcgctggtggcgtggacgccggcggcctgggccttcttcctctacacctgctccaacctcgggccgagggccagggatcaccgccggtggtacgtcggcaagttcggcgacaagtacccggcgtcgcgcaaggcgttcgtcccgtacatctactga</cdnaseq>

Protein Sequence

<aaseq>MGGGGGDDALYARCLVILYLISPITVFLLRFVSAPYGKLSRPGW GPAVPAALAWFLMESPTMCLPPLVLSAAASSSALRAAALLPAALYALHYVNRTLVHPL RLLRLRRAPAPVPILVAAFAFGFNLLNAYVQARSWALDAAAPHSTATATATPAAVARC LVGLALFAWGMRTNIAADKALLRLKEAGKGYQIPRGGLFDVVTCPNYFGEAVEWLGYA LVAWTPAAWAFFLYTCSNLGPRARDHRRWYVGKFGDKYPASRKAFVPYIY</aaseq>

Gene Sequence

<dnaseqindica>155..961#agccacctgcggatctgccccaatgccacagcatcatcaccgtctctagccagagccgcgaaggccgcggcgtagctgctcctgcaccagggacgctcccatccacgaatcgtgggtaacgcaccgagagcggcggcgcacggaagccacggccatgggcggcggcggcggcgacgacgcgctgtacgcgcgatgcctggtgatcctgtacctgatcagcccgatcaccgtgttcctgctccggttcgtgtcggcgccgtacgggaagctctcccgccccgggtggggtcccgccgtgccggcggcgctcgcgtggttcctcatggagagccccaccatgtgcctcccgcccctcgtcctctccgccgccgcctcctcgtcggcgctgcgcgccgccgctctcctcccggccgcgctgtacgcgctccactacgtgaaccgcacgctcgtccacccgctccggctcctccgcctccgccgcgcgccggcgcccgttccgatcctcgtcgccgccttcgccttcggcttcaacctcctcaacgcctacgtccaggcgcgctcctgggcgctcgacgccgccgctccccacagcaccgccaccgccaccgccacgcccgcggccgtcgcccgctgcctcgtcgggctagccctcttcgcgtgggggatgcggaccaacatcgcggcggacaaggcgctcctgaggctgaaggaggccgggaaagggtaccagattccccgcggcgggctgttcgacgtggtcacctgccccaactacttcggcgaggccgtggagtggctcggctacgcgctggtggcgtggacgccggcggcctgggccttcttcctctacacctgctccaacctcgggccgagggccagggatcaccgccggtggtacgtcggcaagttcggcgacaagtacccggcgtcgcgcaaggcgttcgtcccgtacatctactgattcctctgttattgctgatggatacgtatcggccagggagtgatgcgcattgtgcttcacctcgaaacagcttttgattcatactgttggcatgcgcatgtggttctgttggattggaataaaaatgagccgtatcgtggctgtttgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0851600, RefSeq:Os01g0851600