Os01g0857300

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Revision as of 05:11, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0857300| Description = Similar to 3-deoxy-D-manno-octulosonic acid transferase-like protein| Version = NM_001185730.1 GI:297720594 GeneID:92...")
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Gene Name

Os01g0857300

Description

Similar to 3-deoxy-D-manno-octulosonic acid transferase-like protein

Version

NM_001185730.1 GI:297720594 GeneID:9266107

Length

3675 bp

Definition

Oryza sativa Japonica Group Os01g0857300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38795403..38799077

Sequence Coding Region

38795654..38795851,38796191..38796261,38796351..38796495

Expression

GEO Profiles:Os01g0857300

Genome Context

<gbrowseImage1> name=NC_008394:38795403..38799077 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38795403..38799077 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatgaaataccatggaaaataggtgaattaagaatgctctacagggttactccaatagctgttattgggggttcttttttgcccggcttagctggacataatatttctgaggctgctgcagttggttgcgctgttatgactggtcctagtgttgggcacttctatcatatgctggtcgaaatgtggcaaataaatcctttagctgtcaagcaggtcaaaggagaatatgaacttttggaagcactaaaacaactgcttggtgattctagagctctggaagcatgtcaaagagccgcaaaagatgcgttttcctttatgtcagatggagttgtcaatcgtgtatggaatttagtccacccgttcactattggttcccaaacagacacatgcgacagcttctcgagtagttag</cdnaseq>

Protein Sequence

<aaseq>MNEIPWKIGELRMLYRVTPIAVIGGSFLPGLAGHNISEAAAVGC AVMTGPSVGHFYHMLVEMWQINPLAVKQVKGEYELLEALKQLLGDSRALEACQRAAKD AFSFMSDGVVNRVWNLVHPFTIGSQTDTCDSFSSS</aaseq>

Gene Sequence

<dnaseqindica>3227..3424#2817..2887#2583..2727#gttggacgggccaggctcgatgcggacggcccgcacgccggcgtcggcggcgcgcggcggccgggcgctgtacgagctgtacagggcggcgagccgcgcggcggcgccggcggcgcttctatggcggcggctacgaggactggagcacccgtcgcgttggcccgagcggctgggcaggccgtcggtggcgcggcctcgtccgggctcgccgctcgtgtggttccacgccgtatccctcggcgaggggatggccgcgctcccggtcgtacgccactgcgcccgcctccaccctggtctccccatcctcctcaccactactaccctctcatccttgtaagcttcccccattaccgcaaatacgagttgcctggctctctcatttccgtgtaatgtggccatattctatttcggttgttttgatttcaatgcagcgaagtgatgaaagacttgctcccggatggtgtcatatatcaggtgagctcggaaattgctcttgtactttcagatccctgtcgtgacggccggtttagttttctgagaaatggcgtatgcacaacaaatttttactgatggactgttcttgaaaaaaaaggacattttaggttcgaactgtgtcaaggcagatagatattgtctgttcattatatgtatcccttaaactaaggtcatattatactcgttgaactatgatagtaaggtttcgtaatattaaacctttaaggtggtaatattcgatagtacagacacagatcaagcaaagttttgggaacagatggaacttgtttagatgaagggaatcacgaataggctaacagaaggatagtttaaatgtttgatatgccctatatacatctacggtagcttattgttgttttacataactgaaatacatatgtgtgtagtttgcaccccttgactgtcctgatgcaatagaaagtttcattggatactggaaaccaaatttgatacttcttatggaaagtgaactctggccaaacctcattttgtctgcagcagagaaaggggtaagttttttttttctcataatgactattttctactaagtggttaggcttccctttgttacccttgttttttccatgtgcaatggcagattagctatattttcggtccatagtacattctttcactatttaattatctgctgtgaatgaccttcctatttttcagattgcagtggttcttttaaatgcgcgcatgtcattgaagtctttcaaccgttggtccttgcctctagggttgcagttagtctctttgatgctctccaaactatcacttgttatcccattggtatggagtggtggggttctaaaccttattttgatgtaaaattattgccattgtattcatttctatctgttccagagtactattcaagctgttcgttttcaattacttcatgcaccaccacagatcatccattttgctggcgatttaaaatacggtatgcgccatgccaatttttctctggcttcctatgttcatgagagtatgtttgaaataaacatatgagtgatgcatttctcaaggattatcttgggagcttgaaagataaccaggttcacaaactcaataatttatagagattcatgtgatttacctagctgttggtgacattgctgctggggagaaagaggtagctgcaatagaagatcttcagcagcagttcagcaataggcccatctggatggcagcttctatccacaaaggggaagatgaaagtaagcacctcagacacccaccttttctttttattggatcagtattatctgctcttccaaggaactgtgtgcaggactaaaactgtatatatgtagctgttttgcctatggtgatgatcaccattgatatccctaaagtcattgctgacttctttatgctttcctgaataattgaatccttgccttactatgcttatgttctcaacataaaaacaatgttgacaagcttcctctctttttcagtcattctccgtgttcatgatgagttaaccagggcgtatcctactctacttttaattctcgtcccaaggcatcctgaggacagcaagaatgtttctcaagtatgtcaattgtcttccttacccttttatatctggtcctgtttagttgatgaagtagttggtgggttgtactgcttatcttttagttttttttaatacattatcatattgggtaatctataggtgtagcattgttgtaatgaaaaaaagggaactaacttagttcactgtatgaagcttgaaattaattgcttataactgtttgtatacgattacttgaaatttcttatggttctagagcatgtagcatatgattctcacttcaatgctgatagtataatatgtatgggccacatctttagttctttactcatcttcttttagaccctgaagaaacagaaagtgaattttgtgctgaggtcaacaagagaagtggtgtcttcaaacaccagtatatatgtggttgatacgttaggtttgtgctatctcttatgccttaagtttgcacattttttcagtatggagtatggactgtgtatattcttttgaatgttagttaatgaatgaaataccatggaaaataggtgaattaagaatgctctacagggttactccaatagctgttattgggggttcttttttgcccggcttagctggacataatatttctgaggctgctgcagttggttgcgctgttatgactggtacgcaagagtgcaagacacatctgactattttgaatgactttttctacaaaatcggaatgtctagagtttcattaattgtctttcaggtcctagtgttgggcacttctatcatatgctggtcgaaatgtggcaaataaatcctttagctgtcaagcaggtgataatctgtcttgtactttgttatttatctaactgacacaaaaaatgccgcatcatttgtgcactatgttcgattaagagtgggattactactatttcgtggccttcttaggggaggtattttgttaattattgacttggccttgtccctacttctggaaattagtttggacggtaacaggatgaattgccttctacttgctctttcaataaattatgcttgcaatgtgggtatgctgctttactgcatgggtgattctttttttttttacacctaaacatcgcaaggagctacagcccctttcattctatgaggattaatgcaaatgtttttcaggtcaaaggagaatatgaacttttggaagcactaaaacaactgcttggtgattctagagctctggaagcatgtcaaagagccgcaaaagatgcgttttcctttatgtcagatggagttgtcaatcgtgtatggaatttagtccacccgttcactattggttcccaaacagacacatgcgacagcttctcgagtagttagtatggaaggcttgcacatggaagtatggaaaatcagggtagtcacatttaaaacattgacatcttctagtaacttgcagggacaggttgacaatgtatgagtcctctttattaggaagataaggtctcacgaatttctctgtacagtctgatgcacataacaaacttgtactcctagcatgccggtgacagatgacacaaatatcaaattaaaggccattagctcctcttagcaatctaacatttctgacg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0857300, RefSeq:Os01g0857300