Os01g0857600

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Revision as of 05:11, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0857600| Description = Conserved hypothetical protein| Version = NM_001051390.1 GI:115441150 GeneID:4324759| Length = 3142 bp| Definition ...")
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Gene Name

Os01g0857600

Description

Conserved hypothetical protein

Version

NM_001051390.1 GI:115441150 GeneID:4324759

Length

3142 bp

Definition

Oryza sativa Japonica Group Os01g0857600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38821601..38824742

Sequence Coding Region

38821765..38823087,38823486..38823765,38823851..38823891

Expression

GEO Profiles:Os01g0857600

Genome Context

<gbrowseImage1> name=NC_008394:38821601..38824742 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38821601..38824742 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcagtcctgccgcaagaacaagcgcaaggagctcagcaatggcaagtcgacggcgccggaagagcagcgcggcgacgtcgaggagatcgcctggagtcagaaggggcagcaagatggatcggattgcaccgacgacggccaggcggacatggacggcgaggttgctggtggtcagtatgtgatcaggtacgagaaggacggcgagatggaaagggtgctcgagaggcaggccgagctgatcggccagtatgaggcggaggaagaagctcagaggcagtgggagaagcagttcaacgagaatcggagctcagccaaggttcatgttgaggcagagaataaggcgtgccagatagaaaatggttgggagcagagcaaggagcattctaggctcgcggatcaagcggttcattgcaacgaagaggcaaaaccaggcgttaaaaatcaccccagcgccagcaacaaccgctctgctggacttctgttgaatggttcccttcctgaatcaccccaagacacatcaggacaagaagcagcagccgaccaacgtgactcgcacgaggagcttcacggccactgtcatgcacagtctcaaggaaactctaatgtcgccggcacaatgacagggaagaatcaagaacaaggaaacgagaatccggatggatgttcaagctactgtgacatcaaagcgccatcagatgggagcccgtcaatgagtgatgccaccctgaacagcaaggtctctgattggagctcatcacgcttccatgaccatggcgacaaccaggtcgatgcagggccagatcaacagccaacgagcaacatggacatagagtgtgttcttcaggcacttcagcttgccaggatttccctgagtcagaagctgagcaagccagttccacccagccaggtgacgctggcgcttcctgcaccaggggaccatgaacattcagaagacgacggctactcccccgtcgacgacgagttcaattctgcaagagatgagctctgcagctcaagccaatctcctgatcaggagatactggctctccctgcaccagaggattaccatgacagggagaatttgcctgccaatgacgacgctaccatttcactgacagaggaacagaccagttcaagcccacaccggcaggagatcctggctctcccggctccggtagatgattaccacagagagatagtggatgacatcaagatacctatctgcattgccggcttgtttcggttgccaacagactcatttccaaaggacgagatggtctcaacttgcaacaaatatggaggttcagagctcaatctgagaccaactgcagctgctcctcagaacgccttcgtgagcaacactgctgatcgtgtcacggtagctccgtcagagataagagatgatcatggcttttcaacgaggccatgttacgatccacacagttctgggctgctgtctgtgcctacttctggtaggtgtagcactccaagttcagattttacaataaggggagcttctttcctctccggaattcccggacttgctgaagatttcaggaagggaaggccccttgcagatgcagacctgttcatgcagcgtggctgcgattacactatttctaataagtggatgctgtag</cdnaseq>

Protein Sequence

<aaseq>MGQSCRKNKRKELSNGKSTAPEEQRGDVEEIAWSQKGQQDGSDC TDDGQADMDGEVAGGQYVIRYEKDGEMERVLERQAELIGQYEAEEEAQRQWEKQFNEN RSSAKVHVEAENKACQIENGWEQSKEHSRLADQAVHCNEEAKPGVKNHPSASNNRSAG LLLNGSLPESPQDTSGQEAAADQRDSHEELHGHCHAQSQGNSNVAGTMTGKNQEQGNE NPDGCSSYCDIKAPSDGSPSMSDATLNSKVSDWSSSRFHDHGDNQVDAGPDQQPTSNM DIECVLQALQLARISLSQKLSKPVPPSQVTLALPAPGDHEHSEDDGYSPVDDEFNSAR DELCSSSQSPDQEILALPAPEDYHDRENLPANDDATISLTEEQTSSSPHRQEILALPA PVDDYHREIVDDIKIPICIAGLFRLPTDSFPKDEMVSTCNKYGGSELNLRPTAAAPQN AFVSNTADRVTVAPSEIRDDHGFSTRPCYDPHSSGLLSVPTSGRCSTPSSDFTIRGAS FLSGIPGLAEDFRKGRPLADADLFMQRGCDYTISNKWML</aaseq>

Gene Sequence

<dnaseqindica>1656..2978#978..1257#852..892#gtgctgcagcggggcgcttgtgtcgcgcgtaggtagcgtactccctgtcctgggctgtcggtgcgccgtgcgcccgcggccgcgagtacgacgcgcgctgcgtgtgcgccgtgcgcggctcacgggaaaccaagccgtttttaatacgcggcgccggtcaagccacaccgccggcatgtgacagtgcgcggagcggcatacgtacgcagcaacgtcactcgcggctcggctcggggagcgcgtgagcgtgcgcgcggtggcatgcatggcggactccacggccatgaccgtcgacttcctccgcgcgcggctgctctccgagcggtccgtctcccgcgccgccaaggagcgcgccgaccagctcgccaagagggtcagccagccaccgcgcgcaggggcagcctactctcgctgtcgttcgcgccattgattacgtgtgttgggtcacttggttgtaggttgcggagctggaggagcaggtccaggcggtgacggcgcagaggcggcaggcggagcgggcggcgacggaggtgctgggtattctggagtcacatggcttcggcggcaacctctccgacgtgctcgactcgggctccgaccgcgacggcgaggaggatgacgacccacgcgacgcgaggagcgacggcgacacggccggctcccgcggggaggagcagccgccggcgcagtgcgaagcggcggaggacgcgctgtccgggacggccgagcccggcggcgggctgtcgtggaaaggccgcagcgtgagcccgcgcaaggcgaggcagctcaagcagaagcaccggaggagctacttctacctcctctcctccgacccgtcgcccaagtaccggatggggcagtcctgccgcaagaacaagcgcaaggagctcaggtgagctccgtcccgccatagacgctggcacaccgcacacgccattgtttgtcgaattctaacatcccacggctctgctcatcagcaatggcaagtcgacggcgccggaagagcagcgcggcgacgtcgaggagatcgcctggagtcagaaggggcagcaagatggatcggattgcaccgacgacggccaggcggacatggacggcgaggttgctggtggtcagtatgtgatcaggtacgagaaggacggcgagatggaaagggtgctcgagaggcaggccgagctgatcggccagtatgaggcggaggaagaagctcagaggcagtgggagaagcagttcaacgagaatcggagctcagccaaggtaagcaaccaaacacagttacacagaaacactgctcagagttgtgataccaaattcttccacttccagagaaaatgtttcacatgaagcaacttctgcagtagtacatgtgtacaacaaaaatataatctcataactttgtaccatgaactacgccacagagagagtcaacttccccttgacttccacatgctaccaaatttagtgcacatgcagtacaaaaatgtgtaccaccaacttgataagtataaataatttgctctctcaaaatgcttttttttaataacaaaatgcactgcagagtgctacccacaggttagttagtatcatgagtgaaacctggttgttttggttcaaaatttgacattttactcatacttttgtctttggagctccaggttcatgttgaggcagagaataaggcgtgccagatagaaaatggttgggagcagagcaaggagcattctaggctcgcggatcaagcggttcattgcaacgaagaggcaaaaccaggcgttaaaaatcaccccagcgccagcaacaaccgctctgctggacttctgttgaatggttcccttcctgaatcaccccaagacacatcaggacaagaagcagcagccgaccaacgtgactcgcacgaggagcttcacggccactgtcatgcacagtctcaaggaaactctaatgtcgccggcacaatgacagggaagaatcaagaacaaggaaacgagaatccggatggatgttcaagctactgtgacatcaaagcgccatcagatgggagcccgtcaatgagtgatgccaccctgaacagcaaggtctctgattggagctcatcacgcttccatgaccatggcgacaaccaggtcgatgcagggccagatcaacagccaacgagcaacatggacatagagtgtgttcttcaggcacttcagcttgccaggatttccctgagtcagaagctgagcaagccagttccacccagccaggtgacgctggcgcttcctgcaccaggggaccatgaacattcagaagacgacggctactcccccgtcgacgacgagttcaattctgcaagagatgagctctgcagctcaagccaatctcctgatcaggagatactggctctccctgcaccagaggattaccatgacagggagaatttgcctgccaatgacgacgctaccatttcactgacagaggaacagaccagttcaagcccacaccggcaggagatcctggctctcccggctccggtagatgattaccacagagagatagtggatgacatcaagatacctatctgcattgccggcttgtttcggttgccaacagactcatttccaaaggacgagatggtctcaacttgcaacaaatatggaggttcagagctcaatctgagaccaactgcagctgctcctcagaacgccttcgtgagcaacactgctgatcgtgtcacggtagctccgtcagagataagagatgatcatggcttttcaacgaggccatgttacgatccacacagttctgggctgctgtctgtgcctacttctggtaggtgtagcactccaagttcagattttacaataaggggagcttctttcctctccggaattcccggacttgctgaagatttcaggaagggaaggccccttgcagatgcagacctgttcatgcagcgtggctgcgattacactatttctaataagtggatgctgtagcttgtaacatgcatgaatttgttctctttgctttttttactagcggaaggcagcactgataattgacaagtagtatttctcatggctgcatatccttgtgaagaaggcgttcgattactaggggagataatttgaccaagacatgggaagtgcgccactttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0857600, RefSeq:Os01g0857600