Os01g0860500

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Revision as of 05:11, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0860500| Description = Similar to Hevamine A precursor [Includes: Chitinase (EC 3.2.1.14)| Version = NM_001051407.2 GI:297597995 GeneID:4325...")
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Gene Name

Os01g0860500

Description

Similar to Hevamine A precursor [Includes: Chitinase (EC 3.2.1.14)

Version

NM_001051407.2 GI:297597995 GeneID:4325067

Length

1193 bp

Definition

Oryza sativa Japonica Group Os01g0860500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38995430..38996622

Sequence Coding Region

38995458..38996375

Expression

GEO Profiles:Os01g0860500

Genome Context

<gbrowseImage1> name=NC_008394:38995430..38996622 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:38995430..38996622 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgacaagtagaatgttttcggcaatgcagatgctgatcatggtggtggtggcattggccgggctagctgccggagcgcgcgccggcgacatcgcgatctactggggccagaacggcaacgagggcacgctggcgcagacgtgcgcgaccggtaattacaggttcgtcatcgtggccttcctgcctgtgttcggcaagggccagacgccggtgctgaacctggccggccactgcgacccggcgtcgaacggctgcaccggcgtgggcgccgacatcaagtcgtgccagagcctcggcatcaaggtcatgttctcgatcggcggcggcgtcggcaactacggcctgtcctcccgcgacgacgccaagcaggtcgcggcgtacctgtggaacaactacctcggcggcacgtcgccgtcaaggccgctcggcgacgccgtcatggacggcatcgacttcgacatcgagagcggcgggggcatgtactgggacgacttggccaggtacctcaaggcgtactcgcggcaggggagcagcaagaagccggtgtacctgacggcggcgccacagtgccccttcccggacgcgtcgctcggcgtcgcgctcagcaccggcctgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagctcgtccaacggcgtgggcaacctggcgagcgcgtggaagcagtggacgtcgatcccggcgggacgggtgttcctcggcctgccggcggcggcggaggccgccggcagcgggttcgtggagacgagcgacctggtgtcgaaggtgctccccgtggtgaagaagtctcccaagtacggagggatcatgctgtggtcgcggtactatgacgggctcacggggtacagcgacaaggtgaagtccagcgtttga</cdnaseq>

Protein Sequence

<aaseq>MMTSRMFSAMQMLIMVVVALAGLAAGARAGDIAIYWGQNGNEGT LAQTCATGNYRFVIVAFLPVFGKGQTPVLNLAGHCDPASNGCTGVGADIKSCQSLGIK VMFSIGGGVGNYGLSSRDDAKQVAAYLWNNYLGGTSPSRPLGDAVMDGIDFDIESGGG MYWDDLARYLKAYSRQGSSKKPVYLTAAPQCPFPDASLGVALSTGLFDYVWVQFYNNP PCQYSSSNGVGNLASAWKQWTSIPAGRVFLGLPAAAEAAGSGFVETSDLVSKVLPVVK KSPKYGGIMLWSRYYDGLTGYSDKVKSSV</aaseq>

Gene Sequence

<dnaseqindica>29..946#agaagcaagaattcgatcgagaatcaccatgatgacaagtagaatgttttcggcaatgcagatgctgatcatggtggtggtggcattggccgggctagctgccggagcgcgcgccggcgacatcgcgatctactggggccagaacggcaacgagggcacgctggcgcagacgtgcgcgaccggtaattacaggttcgtcatcgtggccttcctgcctgtgttcggcaagggccagacgccggtgctgaacctggccggccactgcgacccggcgtcgaacggctgcaccggcgtgggcgccgacatcaagtcgtgccagagcctcggcatcaaggtcatgttctcgatcggcggcggcgtcggcaactacggcctgtcctcccgcgacgacgccaagcaggtcgcggcgtacctgtggaacaactacctcggcggcacgtcgccgtcaaggccgctcggcgacgccgtcatggacggcatcgacttcgacatcgagagcggcgggggcatgtactgggacgacttggccaggtacctcaaggcgtactcgcggcaggggagcagcaagaagccggtgtacctgacggcggcgccacagtgccccttcccggacgcgtcgctcggcgtcgcgctcagcaccggcctgttcgactacgtgtgggtgcagttctacaacaacccgccgtgccagtacagctcgtccaacggcgtgggcaacctggcgagcgcgtggaagcagtggacgtcgatcccggcgggacgggtgttcctcggcctgccggcggcggcggaggccgccggcagcgggttcgtggagacgagcgacctggtgtcgaaggtgctccccgtggtgaagaagtctcccaagtacggagggatcatgctgtggtcgcggtactatgacgggctcacggggtacagcgacaaggtgaagtccagcgtttgagctagccagggtaagctcgtgtcaggtcggcgttcgcgtagaatcacacgtgccgcgcgttccctgcaagatggagtagtttctacacatttcagaacaaagcaaacatgtacaataagatggccggcttgtatactcatttagaagcagaaaaaattgtgagaaatttacgtgtttggtgtgttctacagttcgagatgtgtcgattctattttcgcatgtggcatttgtggctgcttgctagacg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0860500, RefSeq:Os01g0860500