Os01g0866800

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Revision as of 05:12, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0866800| Description = Similar to F24P17.15 protein (Tubby-like protein TULP9)| Version = NM_001051445.1 GI:115441260 GeneID:4325075| Lengt...")
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Gene Name

Os01g0866800

Description

Similar to F24P17.15 protein (Tubby-like protein TULP9)

Version

NM_001051445.1 GI:115441260 GeneID:4325075

Length

3392 bp

Definition

Oryza sativa Japonica Group Os01g0866800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39291800..39295191

Sequence Coding Region

39293097..39293462,39293600..39293687,39293940..39294072,39294155..39294914

Expression

GEO Profiles:Os01g0866800

Genome Context

<gbrowseImage1> name=NC_008394:39291800..39295191 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39291800..39295191 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtttcgtagcatagttcgcgatgtccgggatggttttggaagcttgtcaagaaggagctttgaggtgacccttgcaagtctttatggacttactgggcatcacaaagggaagactcagagctcattggatgagctcgatgactcacctgctataatcccagagagccgctgggcaagtcttccgcccgaactcctccgtgaggtcatacggagactggaggctgatgagagtacatggccatcccgaaggaatgtcgtctgctttgcagctgtttgtaggacatggagggaaatgtgtaaagagactgtgttgagcccagagttttgtgggaaacttacctttccggtctctataaagcagcctggtcctcgagatggtatgattcaatgttatataaagaggaatagatcaaaatccacctaccatctctatctgtgccttagcaacgttgttactgcggaaggtgggaaattcgtcttagccgctaaaagacaccgtaaaacaacttgcacagagtacactatttcaatggtttctggcaacatctcaaggtcgagcagaactaatattggaaaattgaggtcaaatttccttggcacaaaatttataatttatgacacacagcccccttacaatggggctgtagtccctcacgtcggaaggaccagcaagagatttaactcaacgaaagtttctccgaaggttccttctgttacttataacatagctcaggtgagctatgaactaaatgtccttggcacaagaggtcctagacggatgcgttgcatgatgcactccatacctgcctcctcggtggagcctggtggcatagtccctggccagcctgagcaaattgtacctcgagctctggaggactcatttcgcagcaccacctccttctctcaatcattccggagcaccacctccttctctaagtccatcatggacccatccatggatttcagtagtgctcgcttctctgacatcagtggttctataatgggtggtgatgacaatggtgaaatcaaggagaggcccttagtgctccgtaacaagcccccgagatggcatgagcagctacagtgctggtgcctgaacttccgtggccgtgtcaccattgcctcagtgaagaatttccagctggttgctgcaccaagccctcctcctgctggtgctccaactccttcgcaacctggtccagccgaccccgaaaaggttattctgcagtttggaaaagttgcaagggatatgttcacaatggactaccgctatcctctctctgccttccaggctttcgctatttgtttgagcagtttcgacacgaaattggcatgtgaataa</cdnaseq>

Protein Sequence

<aaseq>MSFRSIVRDVRDGFGSLSRRSFEVTLASLYGLTGHHKGKTQSSL DELDDSPAIIPESRWASLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCK ETVLSPEFCGKLTFPVSIKQPGPRDGMIQCYIKRNRSKSTYHLYLCLSNVVTAEGGKF VLAAKRHRKTTCTEYTISMVSGNISRSSRTNIGKLRSNFLGTKFIIYDTQPPYNGAVV PHVGRTSKRFNSTKVSPKVPSVTYNIAQVSYELNVLGTRGPRRMRCMMHSIPASSVEP GGIVPGQPEQIVPRALEDSFRSTTSFSQSFRSTTSFSKSIMDPSMDFSSARFSDISGS IMGGDDNGEIKERPLVLRNKPPRWHEQLQCWCLNFRGRVTIASVKNFQLVAAPSPPPA GAPTPSQPGPADPEKVILQFGKVARDMFTMDYRYPLSAFQAFAICLSSFDTKLACE</aaseq>

Gene Sequence

<dnaseqindica>1298..1663#1801..1888#2141..2273#2356..3115#cacccgccttccctttcctctcttctcctctactcctcgccttcttcttcttcttcttcttcttcttcttcctcttgctgttcttcgctcgcgcccgcccaccactgcaactcctcgtctccccctccgccgcgttgccgggtggagttgccttgcccgagaggagcgggcacttcgggtttgtgagagtgagagctctgtgcagcggacaggtttgaggcggcggcggcggggctcccactcggccgaatgtgagtgctcttgtctggcttacctgatttgggcttggtttgtttgcggttctggggcttatggttgttcggtgagtagctgcctcggtggaggagggctgggttttcgggaccttcttggctggccggatcggtacatcgtaggggtgcgatttggtagatatggtgttgttcaggagaaatttcgagaggaaatgtgaacttgcgggttttctttttctccttccttcactgtctctgtcacagttcttgtttttctttgccggtcgcattgcagtagttgacgaagggaagcgtatttagttaggcctgtatctaagcgtagaccatatcaaatttatcaacttgtctataaaaaaattggagataaataatggatctttattatattcctagtctagggtatgggttgtcatgtaaaccgcaagatttccacctcgaaatgcaacagcaatctacaggcgattttaatatgtgtaataatgttctgttgctcagtcctcttccatggaaagttctttattttagttgcagaaggatgtgtcatgtggttggcaaaccgtgttaatttcagtggtgggatagcaatttcctcaatttgaaaagaatcatagttttcttgtgcccaaagtgatgcttggtgtgtatatacgtaggaggaaagtatgtgctggtgatggacttgattattcccctttaactgctggctaggataggtgtacttggttgttggttgttacaaggtctaggttgatttagcggtatatcattctaagcatgtgccagtcaaattcatctagtacatacttcacatgttatctaatcaagaatcttttgttttttgcagggactgctagtagcggttgcttctatgtgtacagtatctaaccttctaaccattttcaaaggaggtgtggtaaactcttgctcatttttctaccaaagtttagttaaatggattgttaaccactctttcctatttgcaattggcaggtcatattttgtagggcatcgtatgccttattatctggcattggctggtttagatgtcgtttcgtagcatagttcgcgatgtccgggatggttttggaagcttgtcaagaaggagctttgaggtgacccttgcaagtctttatggacttactgggcatcacaaagggaagactcagagctcattggatgagctcgatgactcacctgctataatcccagagagccgctgggcaagtcttccgcccgaactcctccgtgaggtcatacggagactggaggctgatgagagtacatggccatcccgaaggaatgtcgtctgctttgcagctgtttgtaggacatggagggaaatgtgtaaagagactgtgttgagcccagagttttgtgggaaacttacctttccggtctctataaagcaggtaaataagaaagattagttctcacccttcagttttataaattttaaatcaaagttgttgagtgaggttctaagtatgagcagtggctatcttttttcatgcttgagcttgatagattattgtttgtgttttttcagcctggtcctcgagatggtatgattcaatgttatataaagaggaatagatcaaaatccacctaccatctctatctgtgccttagcaacggtatgttactctcccgcactttgcatcccttattagctttatctttctttccttttgtgcatatgcctaaggacgggaaagttgttcattcttaaagaacttccaatgtttgaatgattgagtcattgttccacatttcccgcaaaacaaaggccttgcaaccatgagatttatttttcttatgaaatgaccaagtgcccgcattatctgacttcagttaatcaaatttgctgaatcattctctttgtgcagttgttactgcggaaggtgggaaattcgtcttagccgctaaaagacaccgtaaaacaacttgcacagagtacactatttcaatggtttctggcaacatctcaaggtcgagcagaactaatattggaaaattgaggtaattatcatgttcattgaagatggttattttccattttgcttgtttcataatatataaaccctagcactgtcatttccaggtcaaatttccttggcacaaaatttataatttatgacacacagcccccttacaatggggctgtagtccctcacgtcggaaggaccagcaagagatttaactcaacgaaagtttctccgaaggttccttctgttacttataacatagctcaggtgagctatgaactaaatgtccttggcacaagaggtcctagacggatgcgttgcatgatgcactccatacctgcctcctcggtggagcctggtggcatagtccctggccagcctgagcaaattgtacctcgagctctggaggactcatttcgcagcaccacctccttctctcaatcattccggagcaccacctccttctctaagtccatcatggacccatccatggatttcagtagtgctcgcttctctgacatcagtggttctataatgggtggtgatgacaatggtgaaatcaaggagaggcccttagtgctccgtaacaagcccccgagatggcatgagcagctacagtgctggtgcctgaacttccgtggccgtgtcaccattgcctcagtgaagaatttccagctggttgctgcaccaagccctcctcctgctggtgctccaactccttcgcaacctggtccagccgaccccgaaaaggttattctgcagtttggaaaagttgcaagggatatgttcacaatggactaccgctatcctctctctgccttccaggctttcgctatttgtttgagcagtttcgacacgaaattggcatgtgaataattgttggaagaaggaaaaactgaagaagggcaagaaaagagttcagatgtctggggataggttactagttgatgtttgcatttttttttcttgttttctcggttgtaattgtgcttgttgtagccttgaactagacgtatatgcaggaaagcatgtttttatgtgccctcatgcatgatagaggtaaggagccacatatcatccactgatccatactccatactgtgatgatgtatctgctgtgccattgccaacacaactgtgaaaggttccctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0866800, RefSeq:Os01g0866800