Os01g0867900

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Revision as of 05:12, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0867900| Description = Protein of unknown function DUF502 family protein| Version = NM_001051452.1 GI:115441274 GeneID:4325049| Length = 32...")
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Gene Name

Os01g0867900

Description

Protein of unknown function DUF502 family protein

Version

NM_001051452.1 GI:115441274 GeneID:4325049

Length

3225 bp

Definition

Oryza sativa Japonica Group Os01g0867900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39340738..39343962

Sequence Coding Region

39341185..39341288,39341481..39341607,39341765..39341862,39341961..39342128,39342460..39342569
,39342660..39342712,39343719..39343838

Expression

GEO Profiles:Os01g0867900

Genome Context

<gbrowseImage1> name=NC_008394:39340738..39343962 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39340738..39343962 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagaaggaggagtcaacgtcgatcccgctcagccaggcggcggaggcggttgacccggaggacccggccaagtcgccgccgcggcccagctcgcccaccacctccacccgcaaggcatgctgcgctgttcttcaaagttgggtgtcaagaaaatttatgactggatgcgtcgttctgtttcctgttgctgtcacgttcttcatcacatggtggtttattcaatttgttgatggctttttcagcccactatatgcaaaacttgggatcgacatatttggtcttggttttctgacttctctggtattcatttttctggttggaatatttgtttcctcatgggtgggttcaaccatcttttgggttggagaatggtttataaagaaaatgccatttgttcggcacatatactctgcatcaaagcaagtcagcactgccatttcaccagatcaaaacacaacagcttttaaagaagttgcgataattcgtcatccacgtattggtgaatatgcatttggatttataacatcaactgttgttcttcagactgacaaaggcgacgaagaactgtgcagcgtttatgtgccaacaaatcatctttacattggtgacatatttctggtgaactctgaggagataataagaccaaatttatccattcgagaaggaatcgaaataattgtttctggaggaatgactatgccacaggtgatcgcgtcccttgaacccaccccaaggaagagccagaatatccgtctaaatagaataatgacataa</cdnaseq>

Protein Sequence

<aaseq>MAEKEESTSIPLSQAAEAVDPEDPAKSPPRPSSPTTSTRKACCA VLQSWVSRKFMTGCVVLFPVAVTFFITWWFIQFVDGFFSPLYAKLGIDIFGLGFLTSL VFIFLVGIFVSSWVGSTIFWVGEWFIKKMPFVRHIYSASKQVSTAISPDQNTTAFKEV AIIRHPRIGEYAFGFITSTVVLQTDKGDEELCSVYVPTNHLYIGDIFLVNSEEIIRPN LSIREGIEIIVSGGMTMPQVIASLEPTPRKSQNIRLNRIMT</aaseq>

Gene Sequence

<dnaseqindica>2675..2778#2356..2482#2101..2198#1835..2002#1394..1503#1251..1303#125..244#gctgctactagccgccagccaaaagcagcggcagcgacgcctcacctcgcctcgccctcgtctccggccgcgccgcttgctgggagctagctttggaggaggaggaggaggaggggcgcgagccatggcggagaaggaggagtcaacgtcgatcccgctcagccaggcggcggaggcggttgacccggaggacccggccaagtcgccgccgcggcccagctcgcccaccacctccacccgcaaggtctggatctaacccccccaacccacgcgctcgtcgtgctgcgcctcgcggcgaggggcggctgcattggggggctaatcgcgcgcccgtgctgctcctgttagggggcccccgccgttcccgtcggccgcgtggattcctgcttctccgtggttggatctgtgcggatttggtctcgtgtttttcccgtgagctttgggcgtggattccgagatcgatgggttgttccgaggggttgatcggtttagctttcgctaggtttagattcaggaacttttagctaagttcatattagtcccttgtctgcaatgtagttggtggttgggctactagagtaggaaggccgcagcgtgatatttacaccatattagctggttggatttgttgagattttaggctatgcgaaagcttgtgaatatttgccatcgtgtggttgcaaaaaaaatatgtttaaatactcaagcgtgactggatttggtaccagatttttcggcatgtccctatgctaaatttggagtctggggcttttggtttccatattcagtttatgtcctatgctaaacatggtctaattccaaactagtggtgctagaatagccgtttatagataaatttggacctaatatgaaacacaatgttttttcaatgcttttctgcttgcaatttagacttctacaagtagacagttcttctttgaaagaaattaggactgaataaatttccagttcattaattctgcaggctgaacatttttgtgcttagtgtgtttccatgcctccaagaaatttcatctatgcccttacttggagtagtaatgcaatgcactactttgttcataaatttatggacatatcataatcagatgaaccttggtctaatctcttagtgttgtttgcatttttgtcataaatttgcaaaaacagttgtgttcaataggaatgagttttatgcacttcttaaaatttcatgtatttatttcattcttagtttggtgtgttttgtgcaggcatgctgcgctgttcttcaaagttgggtgtcaagaaaatttatgactggatggtacatctttgacaggaaccaagttaagcatgttaccaaacaaaaagtaaaaaatcatgcattgttcttcttccctttttttttttgcagcgtcgttctgtttcctgttgctgtcacgttcttcatcacatggtggtttattcaatttgttgatggctttttcagcccactatatgcaaaacttgggatcgacatatttggtaattgtggttttcaatttagcctcacattttctactttgaacttcctaattttcttcttgcacacatgtgtgaaaacatgtactgacactttgaaattcaagctctgtgtgcaaattaaactgatgagagagtgagactaatattggtggtattagcaactattttctttttgttttatcattaatttgtgaaaattattcttgatttaagatcctctactgcagtgatagtttgctaaagatgaatcgtatgtctgatattatttctctttaccaccaaatccattttatgtttgtggcaagtgcttattattgttggcacactgcaggtcttggttttctgacttctctggtattcatttttctggttggaatatttgtttcctcatgggtgggttcaaccatcttttgggttggagaatggtttataaagaaaatgccatttgttcggcacatatactctgcatcaaagcaagtcagcactgccatttcaccaggtatacttccatacacaaatatattcatgacacattgacactatcatcagccacattggacaaatgaacttacctcataaaatcatcttgtttggcagatcaaaacacaacagcttttaaagaagttgcgataattcgtcatccacgtattggtgaatatgcatttggatttataacatcaactgttgttcttcaggtaattcatgtagggttctatatggaataaatatgagttagattaacaaaaatctgttattgaggtgcttcgtcatagacatgccatgccatgtatgatccgtaataggtgcaactgtgcttgttcttatgttagtcttgtttgtgttctatggcagactgacaaaggcgacgaagaactgtgcagcgtttatgtgccaacaaatcatctttacattggtgacatatttctggtgaactctgaggagataataagaccaaatttatccattcgagaaggaatcggttggttctcctatcttgcttatgtactatctcctactgcaatattgcatgatcatgtgctattttactggtttctcctgtgcttaatttctctctgcatagagtggatgataaaaccttcctgaagtcaatcgacccatgtaattctaaatttctaatacagtgtttttcttttctttctgcatcattcagaaataattgtttctggaggaatgactatgccacaggtgatcgcgtcccttgaacccaccccaaggaagagccagaatatccgtctaaatagaataatgacataatgtcatacgagagctcaagtgctcaacacggtgggttattaatctctcagcaattagccccagcaattcttgttttcatgtttactaatatgcacatgctcctcaagcagatcgtgttatgtgtggaatcggtgtgactctggtgctctgaccattgctctgttcatcttcgtttctgttgtgtcaaaatgtggaggctggagaggagaacacggcgtgagattgatcgagccatcttaggctcgtggcattacagaaggtggcggaagcaccatatcgatgctcaggaatagtattggttgtgtgtcacatgccgcgctactctttggttgctgactggtctgaaatgttaacgtccctagtgcaagtgcaactgattaaattcatttgtaacaatatcatgtataacatcatgtcgacctcgtattacgtagagttgattatacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0867900, RefSeq:Os01g0867900