Os01g0868900

From RiceWiki
Revision as of 05:12, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0868900| Description = Proteinase inhibitor I9, subtilisin propeptide domain containing protein| Version = NM_001051457.1 GI:115441284 GeneI...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0868900

Description

Proteinase inhibitor I9, subtilisin propeptide domain containing protein

Version

NM_001051457.1 GI:115441284 GeneID:4324925

Length

2548 bp

Definition

Oryza sativa Japonica Group Os01g0868900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39407681..39410228

Sequence Coding Region

39407731..39410013

Expression

GEO Profiles:Os01g0868900

Genome Context

<gbrowseImage1> name=NC_008394:39407681..39410228 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39407681..39410228 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgtcgctggcaatcgttgccgtggtcgtcgcgctgtgcgtggcggctgccgcgtcggccgagacggcgacgtacatcgtgcacatggacaagtcggcaatgccgagcggcggcggcggcgggaacgggtcgaccagcctggagagctggtacgcggctacgctccgggcggcggcgccgggcgccagaatgatctacgtgtaccgcaacgccatgagcgggttcgccgcgaggctgtccgccgagcagcacgcgaggctgagccggtccccgggtttcctctcgtcctacctcgacgcccccgtgacgcggcgcgacaccacgcacacgccggagttcctcggggtgagcggcgcggggggcctgtgggagacggccagctacggcgacggcgtcatcgtcggcgtggtggacaccggggtgtggcccgagagcgggagctaccgcgacgacgggctcccgccggtgcccgcgcggtggaagggctactgcgagtccggcacgcggttcgacggcgccaaggcgtgcaaccggaagctcatcggggcgcgcaagttcagcgcgggcctcgccgccgcgctggggaggcggaacatcacgatcgccgtgaactcgccgcgcgacacggacggccacggcacgcacacctcgtcgacggccgccggctcgcccgtcccgggggcgtcctacttcggctacgctcccggggtggcacggggcatggcgccacgcgccagggtggccgtgtacaaggtcctgttcgacgagggcgggtacacgacggacatcgtcgccgccatagaccaagccatcgcagacggcgtcgacgtgctctccatctcgctgggcctcaacaaccgcccgctccacaccgaccctgtggccatcggctcgttcgccgcaatgcagcacggcatcttcgtgtccacctcagccggcaacgacggcccgggcctctccgtcctccacaacggcgcgccgtgggcactgaccgtcgccgctggcaccgtggacagggagttctccggcatcgtcgagctcggcgatggcaccaccgtcatcggcgaatcgctgtacgccggctcgccgccgatcacccagagcactccactcgtgtacctcgactcctgcgacaacttcaccgccatcagacgaaaccgcgacaagatcgtgctgtgtgatgcacaagcttcctcctttgctctgcaggttgcagtgcagttcgtgcaagatgccaacgcggccggcgggctcttcttgaccaacgacccgttcaggctgctgttcgagcagttcacgttcccgggcgccctgctgagcccgcacgacgggccggcgatactgcggtacatccagaggagcggcgctccgacggccaagatcgcgttccgggcgacgctgctgaacacgaagccggcgccggaggcggcggcgtactcgtcgcgcgggccggcggtgagctgcccgacggtgctcaagccggacatcatggcgcctggctcgctcgtgctcgcgtcgtgggcggagagcgtggccgtggtcgggaacatgacgtcgccgttcaacatcatctccgggacgtcgatggcgacgccgcacgcggcgggcgtcgcggcgctgctcagggcggtgcacccggagtggagcccggcggccatccggtcggcgatgatgacgacggccgcgacgctggacaacaccggcaggtccatcaacgacatggcccgggcgggccacgccgcgacgccgctggcgatggggtccggccacatcgacccgaacagggcggcggacccgggcctcgtctacgacgccgtcccgggtgactacgtcgagctcatgtgcgccatggggtacaacctctcggacatcagggccgtgacgcagtggtcgacctacgccgtgaactgcagcggcgcgtcgtcgccggacctcaactacccgtcgttcatcgcctacttcgacaggcgcagcgccgccgccgccgccgcggagaccaagacgttcgtcagggtggtcaccaacgtcggcgccggcgcggcgagctacagggcgaaggtgaagggcaacctgggtgggctcgccgtcagcgtcacgccgagcaggctggtgttcgggaagaagggcgagacgcagaagtacacgctggtgttgcgcggcaagatcaagggcgcggacaaggtgctgcacgggtcgctgacgtgggtggatgacgccggcaagtacacggtgaggagtccgattgtggcaacgactttgagctcaacacggctgtag</cdnaseq>

Protein Sequence

<aaseq>MAASLAIVAVVVALCVAAAASAETATYIVHMDKSAMPSGGGGGN GSTSLESWYAATLRAAAPGARMIYVYRNAMSGFAARLSAEQHARLSRSPGFLSSYLDA PVTRRDTTHTPEFLGVSGAGGLWETASYGDGVIVGVVDTGVWPESGSYRDDGLPPVPA RWKGYCESGTRFDGAKACNRKLIGARKFSAGLAAALGRRNITIAVNSPRDTDGHGTHT SSTAAGSPVPGASYFGYAPGVARGMAPRARVAVYKVLFDEGGYTTDIVAAIDQAIADG VDVLSISLGLNNRPLHTDPVAIGSFAAMQHGIFVSTSAGNDGPGLSVLHNGAPWALTV AAGTVDREFSGIVELGDGTTVIGESLYAGSPPITQSTPLVYLDSCDNFTAIRRNRDKI VLCDAQASSFALQVAVQFVQDANAAGGLFLTNDPFRLLFEQFTFPGALLSPHDGPAIL RYIQRSGAPTAKIAFRATLLNTKPAPEAAAYSSRGPAVSCPTVLKPDIMAPGSLVLAS WAESVAVVGNMTSPFNIISGTSMATPHAAGVAALLRAVHPEWSPAAIRSAMMTTAATL DNTGRSINDMARAGHAATPLAMGSGHIDPNRAADPGLVYDAVPGDYVELMCAMGYNLS DIRAVTQWSTYAVNCSGASSPDLNYPSFIAYFDRRSAAAAAAETKTFVRVVTNVGAGA ASYRAKVKGNLGGLAVSVTPSRLVFGKKGETQKYTLVLRGKIKGADKVLHGSLTWVDD AGKYTVRSPIVATTLSSTRL</aaseq>

Gene Sequence

<dnaseqindica>51..2333#ctgaatccgtggcacagctacgtacgtacgtgcgtgctcgttacacgtatatggcggcgtcgctggcaatcgttgccgtggtcgtcgcgctgtgcgtggcggctgccgcgtcggccgagacggcgacgtacatcgtgcacatggacaagtcggcaatgccgagcggcggcggcggcgggaacgggtcgaccagcctggagagctggtacgcggctacgctccgggcggcggcgccgggcgccagaatgatctacgtgtaccgcaacgccatgagcgggttcgccgcgaggctgtccgccgagcagcacgcgaggctgagccggtccccgggtttcctctcgtcctacctcgacgcccccgtgacgcggcgcgacaccacgcacacgccggagttcctcggggtgagcggcgcggggggcctgtgggagacggccagctacggcgacggcgtcatcgtcggcgtggtggacaccggggtgtggcccgagagcgggagctaccgcgacgacgggctcccgccggtgcccgcgcggtggaagggctactgcgagtccggcacgcggttcgacggcgccaaggcgtgcaaccggaagctcatcggggcgcgcaagttcagcgcgggcctcgccgccgcgctggggaggcggaacatcacgatcgccgtgaactcgccgcgcgacacggacggccacggcacgcacacctcgtcgacggccgccggctcgcccgtcccgggggcgtcctacttcggctacgctcccggggtggcacggggcatggcgccacgcgccagggtggccgtgtacaaggtcctgttcgacgagggcgggtacacgacggacatcgtcgccgccatagaccaagccatcgcagacggcgtcgacgtgctctccatctcgctgggcctcaacaaccgcccgctccacaccgaccctgtggccatcggctcgttcgccgcaatgcagcacggcatcttcgtgtccacctcagccggcaacgacggcccgggcctctccgtcctccacaacggcgcgccgtgggcactgaccgtcgccgctggcaccgtggacagggagttctccggcatcgtcgagctcggcgatggcaccaccgtcatcggcgaatcgctgtacgccggctcgccgccgatcacccagagcactccactcgtgtacctcgactcctgcgacaacttcaccgccatcagacgaaaccgcgacaagatcgtgctgtgtgatgcacaagcttcctcctttgctctgcaggttgcagtgcagttcgtgcaagatgccaacgcggccggcgggctcttcttgaccaacgacccgttcaggctgctgttcgagcagttcacgttcccgggcgccctgctgagcccgcacgacgggccggcgatactgcggtacatccagaggagcggcgctccgacggccaagatcgcgttccgggcgacgctgctgaacacgaagccggcgccggaggcggcggcgtactcgtcgcgcgggccggcggtgagctgcccgacggtgctcaagccggacatcatggcgcctggctcgctcgtgctcgcgtcgtgggcggagagcgtggccgtggtcgggaacatgacgtcgccgttcaacatcatctccgggacgtcgatggcgacgccgcacgcggcgggcgtcgcggcgctgctcagggcggtgcacccggagtggagcccggcggccatccggtcggcgatgatgacgacggccgcgacgctggacaacaccggcaggtccatcaacgacatggcccgggcgggccacgccgcgacgccgctggcgatggggtccggccacatcgacccgaacagggcggcggacccgggcctcgtctacgacgccgtcccgggtgactacgtcgagctcatgtgcgccatggggtacaacctctcggacatcagggccgtgacgcagtggtcgacctacgccgtgaactgcagcggcgcgtcgtcgccggacctcaactacccgtcgttcatcgcctacttcgacaggcgcagcgccgccgccgccgccgcggagaccaagacgttcgtcagggtggtcaccaacgtcggcgccggcgcggcgagctacagggcgaaggtgaagggcaacctgggtgggctcgccgtcagcgtcacgccgagcaggctggtgttcgggaagaagggcgagacgcagaagtacacgctggtgttgcgcggcaagatcaagggcgcggacaaggtgctgcacgggtcgctgacgtgggtggatgacgccggcaagtacacggtgaggagtccgattgtggcaacgactttgagctcaacacggctgtagactcttcttttcactcttgtgtactgtagcgtgcaagttgattcacatatctgaagttctgaacatgttgttcgtctctagctgttgggcaaataatgcttttggtggttagttagtgcagtccgtgagttttggtatatgctgctcgaatgccccagtaattggcataagtatttatgttcttgcttttgttcaaaggaactgttagaagccct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0868900, RefSeq:Os01g0868900