Os01g0870300

From RiceWiki
Revision as of 05:12, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0870300| Description = Ammonium transporter| Version = NM_001051467.1 GI:115441304 GeneID:4324937| Length = 10389 bp| Definition = Oryza s...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0870300

Description

Ammonium transporter

Version

NM_001051467.1 GI:115441304 GeneID:4324937

Length

10389 bp

Definition

Oryza sativa Japonica Group Os01g0870300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39483281..39493669

Sequence Coding Region

39491127..39492084,39492950..39493488

Expression

GEO Profiles:Os01g0870300

Genome Context

<gbrowseImage1> name=NC_008394:39483281..39493669 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39483281..39493669 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgggggacgcgttcaacatgtcggtggcgtaccagccgtcggggatggcggtgccggagtggctgaacaagggcgacaacgcgtggcagatgatctcggcgacgctggtggggatgcagagcgtgccggggctggtgatcctgtacggcagcatcgtgaagaagaagtgggcggtgaactcggcgttcatggcgctctacgccttcgccgccgtgtggctgtgctgggtcacctggggctacaacatgtcgttcggccacaagctcctcccgttctggggcaaggcgcggccggcgctgggccagagcttcctcctcgcccaggccgtgctcccgcagacgacgcagttctacaagggcggcggcggcgccgacgccgtggtggagacgccatgggtgaacccgctctacccgatggccaccatggtgtacttccagtgcgtgttcgccgccatcacgctcatcctcctcgccggctcgctgctggggcggatgaacatcaaggcgtggatgctgttcgtcccgctctggctcaccttctcctacaccgtcggcgccttctcgctgtggggcggcggcttcctcttccactggggggtcatggactactccggcggctacgtcatccacctctcgtcgggtgtcgccggcttcaccgcggcgtactgggtggggcccaggtcgaccaaggacagggagaggttcccgccaaacaacgtgctgctcatgctcaccggcgccggcatactgtggatggggtgggcggggttcaacggcggcgacccgtactccgccaacatcgactcctcgctcgccgtgctcaacaccaacatctgcgccgccaccagcctcctcgtctggacttgcctcgacgtcatcttcttcaagaagccgtccgtcatcggcgccgtccagggcatgatcaccggcctcgtctgcatcactcccggcgcaggcctggtgcagggttgggcggcgatcgtgatgggcatcctctccggcagcatcccgtggttcacgatgatggtggtgcacaagcggtcgcgcctcctgcagcaggtggacgacaccctgggcgtcttccacacccacgccgtcgccggattcctcggcggcgccaccacgggcctcttcgccgagcccgtcctctgctccctcttcctccccgtcaccaactcccgcggcgccttctaccccggccgcggcggcggcctccagttcgtccgccaggtggccggcgccctcttcatcatctgctggaacgtggtggtcaccagcctcgtctgcctcgccgtccgcgccgtggttcccctccggatgcccgaggaggagctcgccatcggcgacgacgccgtgcacggggaggaggcgtacgcgctgtggggcgacggcgagaagtacgactccaccaagcacggatggtactccgacaacaacgacacgcaccacaacaacaacaaggccgcgcccagcggcgtcacgcagaacgtctga</cdnaseq>

Protein Sequence

<aaseq>MSGDAFNMSVAYQPSGMAVPEWLNKGDNAWQMISATLVGMQSVP GLVILYGSIVKKKWAVNSAFMALYAFAAVWLCWVTWGYNMSFGHKLLPFWGKARPALG QSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPLYPMATMVYFQCVFAAITLILLAG SLLGRMNIKAWMLFVPLWLTFSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGVAG FTAAYWVGPRSTKDRERFPPNNVLLMLTGAGILWMGWAGFNGGDPYSANIDSSLAVLN TNICAATSLLVWTCLDVIFFKKPSVIGAVQGMITGLVCITPGAGLVQGWAAIVMGILS GSIPWFTMMVVHKRSRLLQQVDDTLGVFHTHAVAGFLGGATTGLFAEPVLCSLFLPVT NSRGAFYPGRGGGLQFVRQVAGALFIICWNVVVTSLVCLAVRAVVPLRMPEEELAIGD DAVHGEEAYALWGDGEKYDSTKHGWYSDNNDTHHNNNKAAPSGVTQNV</aaseq>

Gene Sequence

<dnaseqindica>7847..8804#9670..10208#agcactaaaaaaatttggtgaaaaggaacgacgagccggcgacgagagctccagaaccctagccatggcgggagaggcagggggagacccccgagcgtggcttgccgtcgacgagacggcggcggccttcctctcccgctccctctcggcgcggccccccatcctcctcccgccgccgctccaccgcgctccgctccgcccgggcaacgtcgtcgagatcgctggcccgtccaactccggcaagtcccagctgcttctcacggtaagagaatccaaagctttctccgcctaaatggttagcgaacataaggcatttagccctcacttagtcgtcctttctaccagaacttccctttagcaaatgtcttaagaatttcagtatctgctgcaagctttgatcgaccccaatttgttatgaagctaatgatagtgcatatctgcattcataatctcaatatgggattcaacacaacttatgataagtgaaagaaaaagagcaatgaccgaatgacactatgctgtgcgggagttttagaaaatcggagatatttcgttaaattactgctgtttctgggaacacgggacataggagtaatttacaaagagggggggggggggggttgggagggggattaccttgtgtgtttggtgaaaggtactagtttagaatgctataatgcttcatgcttcataaatcataagtggataaactcaatgccattttgacacctatatatttttttcaatgaagcaatgtaaaagttaagtgtgatctgctcagtcactgagttgttattactattgtaggctgcagtacaatgcatattaccgaaggagtggaagggtacctattttgggggcctgggtaaagtggtcatgtacttggatctggactgccgatttgatgtgctgcggctggctcaaattctgagaaatcgcattggagagtgctgtggtacagttttgcttgcattgtgaactttgcattattaagtcatgcatcctatccaacttagagcatgttgaacatgatgcatgcttttatgggtgcatagagctgactgattaactgtgctgtcttttgttcataatgttgtagttaggaattgatttgtgtaaatcttttataggcttaggctccctccactattctacacctacatacccctcaattcttagtggagaataactgtgccataaatagacaaattttgattcttattgtttccaatcctctgtaattacaggctccacaaatccaacaaatgaagaatttgcaaaggatggcgctacaaatagtttttccgaaaacacgctattttctgagtgcatgaagcgtttcttgtatgcccgttgttacaatagttcagattttatagcagctttgcaggcaagttttatctgacaatatgtttatacacgggcacattagcatcctcatttgtgtcctccttttctttaactgatggctgacatgaaatatgtaaaagtatataaacagggggctatattaaattatgcctgaccctttgaaccactggatgaacaagttggtttctttaggttgtatacttgtataattgctgagtatgcaaaaggttccgttgttccttgtttagatacagaagagtatagggctatcatgtcagtttgcctttctggtaccaaattaaccaactgatcatttgctcaggtgttatgttctgacagttgacttaggcatttgcagtaacatttcttgaatattcataatggtttgacaaattttttttgtcccatagaagacaaaaaaaaaaaacttttgccactcatgtccaacaaaattacttcattcactcatggacatctgttgatttctatcgtaatatatttgtaaaactcaataaatgtataatattatgtaagtaccttttgatcaatcattaatctcgacttatggttttcatgtatctaaatatttaaaaatatattgatcctgaaagttttgaaaacacatagagaatactgagttcttgctcattctctggaatcaccttatatttgtcatggacctaagcttaatctttatgagataatcataagatagctgtattattgaaaaacagtcagaaccatgaaatgcttttgtagaatgaattacaaagaaggcaacacattctgttccccttttatttttgtaacagtctaggagttatgccatgtgtagataagttatatcttaatgcgtatataagatacacgttttgttattataactggttgttcattttacagaatatacattcccaatcaccagcaaagagcgaagttcttggtgttggcatatatttccttatgatagacaggtattccttttcaaggtttcctttgtctttctatttgttatggtcacacttattgcatcttttggtctgccgcttgtattgaagttgtggctactttctcaaaatgctgcatcattcaaatttttttaatggtattctgcattgttctcacataaccatttggccctccggacttttcttctgtactttttattcttgtagtaactgctaaacattttgtaacattatcccttttccagcattggctcattctactggatggatcgtgattctcaacctatcacagagagtaaagggtgattgcgaaaaacatttcatgcagtattagcttcatatcctcctgattttgtcatgtgcatatatcacaataacaattagcatagatgttttaattaattattgtctcttctacacttgtaaacatgtgaataaaacaggtttaacttaatacttcatctgctaaagggtaggatggtacaatactacagtacatagaaagtatgcatcctcttgctatctcgcatacataaattaaaatagaagagttacagcatgttacacagtcacacacactctgaatgcaatgggtagtcactatcacttaataattatcattcaaaagaaaataaatgctacttgcattttcaactaatattagatgcatcattattgcatatgcaacatttacacaaaaaacatcatgaaatacagtatggaatacacatgtacttgtaatgatagtgctcagtggcacagttcaaactacaaaatattactacaacttaggtgagaataactaggtatgtttcaattgcagtgtattgcttaggaaagaggattaaaatgcgtacttgtgcatgggaacactgtacaaaaacatgttagactttgttggaaacatttacaaaattttccaacctgaaagtatccagcattttggattacaattacttctgccaattctgtaactctatctcactagtatctctttgcttttatgctaaccctttcacaactattcatgcaggagaactctatcactgcagagtatgacagaaacagttgtccaaaaattacgcaattttttgcaacttcaacctgttttggtgatggccaccaaggcacccatatatggcgaaggattcactggaaatgatttccaaaggtaatatcactaccagcatggaccctttttactgttatctgatggatgcaaatattttacctctcaaaaggatgattaaggtgtgataaggtgattcattcaggaggaaatggcacaactaattgatcactctgatttgttttacatatttttgccaccatgcatttgctctgtttaaaatcaacatgcttccttttgttgcatatgtcaagttcttttactcaggatcatgatcttcccatgtgaagaagctgaaaacctgaaggatactggctttctttttgggtatttaggggtacttcaaaacagatgttagaggattcaacaatgagatgcataggtcaggaggaagagaaaaacatctcataccgtgaattcatgccgtcagtatggcaggtccgtgatctttattcattaaaatgttaattctgatttcgtacaaagtattacagaacatgctaacagtaagcttcaatcgccatttgatttgtttgttgtatgcatatatacattgccgtgtggccagtatctatttatgaatcataaccacataactgtctaaaggatttctgaatttgtgttcttgcagtcatttgttacacacaggataaagctacaagatttaggttggtaaatggtctttttatgtggttcatgattttgtccttattttcattgcatatgtttatttgatttttacaggacaagaagcagaacttttctctggtcaggaaaacaaggagctacctttacgtacttctgagtggatgcagccttccctcaacacaaaggataagttttctattacagatgtaagctacttatattttttttctttttgtaagctacttgttacctttctttctgttatcaatgtactatttttttttacagtcccatgcatattttgatttagacacgtccttttccatgatcaggatggtgttattcttatccactgaaggttatcagggtttccgctgatgtacatatccaacttcctggctggattattgtaatctgtggaaaaacctgtaagagatgctaatactctgataacacctatgactcagaacccttaggtgagtgcagagtgaacctccctgcttttacagaataaatgatcttaaattttctcaaactaagaagctaatcaaaccaactagcaaagaattcacacgtctcttacatgaaagtcattaaatctatgataaatcgaatgacgcagagaaaagaggctttgtgtttgtactgcagaaaatatatctagataactgcagaaaagaggcttgtccatggtctctgttagagaactggctgtagtttattgggttgttttatcttcaaatatatctagcaaataatctgacttaagtaaaacatttctaaggttaattgaaattttaggaggcgtctaaaacaattgcagtactatacataccgaggtatattgtttctcaccatgagcccctgatgcacttttctggatcacagtacaaggtggtctgtttttttatgatacttgaaaagactattcaacgatgataaaataactcatgtttaatttaattactgcaaatttttcaccattatacttgttttaatttgttagaatgcaactgtcatattattttgaagtttactgtgttttctcacttcccttgatgcacagcttctgttagtcgatcttactttgctctaatatattattttccatactaaagcccaaacataaactcacaaaatatcatcaatgaagcaatagcagaaaaatcatgccatttataatacatgaatctgacagtgaagcaaaatgatcaggtcaccgtttgtcttggcttttgatgtttggcacagcatagttggacttggaactctgtattgattgctgggaaaaagcaagccaagcttctttatctggactaatggctgcattatactaatgtcacgcaagtttgactattttctgattttttaaaacacttctatttctgcgtggccattaggaagtggatgcctgaaaacattagatgggggaattaaaagatataatgcttcagagtcaccaatttatcaggtaattccttcatagccgtgcggcagctgcagctcacattatgcgagctgctttctctgttagatataacttatgtagattaaggctaatctcagtgccagaaaatgaggggtttaggtttgaggaatatgagaatatttatgtagattggacataaaatacgacctagatttacttgctagtttattcaaggccagctcaaattcatgaaggtttggaaattagttctgattgtgcttatgctcttttttttttccctgttactagatggcttgtcttatctgtcacattgtcaagcactatgagaactttgtctaacatcacatttgatgtgaatctttgtgtgcctgctacatatggatttgttcttattttgtgagtttctacttgagttcctagctgtcatttttattctttttttttgttccagctagtgcttgtcgctcactcatagcaagatacgcacccttcttggtgatccctaagtatacccaaacactttattgcgttattgtagttggtatagtcatcttcttgtccatgctaggtcgctagcattgtgctttttccacttctttttatcaattgttgttcgtcaatcgagcatagcagctgatgtactagtttaacacaaactatacaattccacggatgaaggtgaaatggaagatgttaacggcaatggttactttctgccggccttgcaattgacgagttggtcctccaaatatgattgtagatgtcgcttttgtgttttatgtaatcatatgtgcaaatgatctacctgagatgatgttgactaatgttaatttagatgataatggtatattcttgcagacgagttctttccgacgcccctgatacatatctgttgtcttgtacagagtacagactttccatggcggcatgagtgtctcgtggtgtcgtgcagtagccctgaactctttctgaatcacgaactggataaagcttgattgagagagttggcaaggttgctgttcacattaatctgtgacccaaggtgtaaacaaagcttttggaatgcaccatggaggtcagggttctccaaacccttttaatctcgtggaatgaaaagcaatggaggactcatatttgctgtagctttcgaccgtggagctcacagaatcctcgtgcagaactgggtgtagcactcactacactccatcccgtgggagcttttggtacgacaaagtttgcagtcatcaaagtggcagtgtaaaatggtgggagacttggggtgacgaccttgtaatcttgctggtgaatctccccttctaaaatcctgtagcagatgtccaagaatattcaaccaactgctgaaaagtgaaaacgaccttggatcccatattctcattgtattggagaggtcagcaagctgctagtgctgcaatatggaagcaggactggaggagcagaggcgatgcgtttcacccaatgcactacgaggtcagacagccatctgctgccacgtgtactgctacggtcagccgtatgcgaagcaaacaacaacccactactggacagcaaaaggcccagtctacttgccaatcattcgttgctcggccggttctgtacttctgacgatcgcaggtacaactcgtcggcctgaaatcctgtatgcttctttacataggatttttttcccctttatcatgcattaatcctctctcatttgatacaaaatcgtgaaagacttgacacttcgataaactcagaatagaggatccgaatggaaatttactccaattttttttaaaaaaattaaaaataaaatagggcagtggctacctaggacaagagcatccagccaggccgaggaaaatcctttaccagccaagccaaaacattcacaagtccagaagcacacaagactcgatcactcgagtctctacgtgaatcttagcggaagataagggagcatcagtacagcccagccaataggacgcgttctcctccaatcccaaagccgcgcgcttggattcttccctcgccgatctcgcgagccccagctgtgctcgttcatcactaggctctccctcgtgtcactcaccattctattcgctctcgccgccagctgcctcgccgcctcaccctatatatatatctcgccgtaagttccccatagcttcaccatcgccgtgcaccgaccgaccgatctccggccagccggccagccagccagccaccgtagtcgatcgtcgtcgagagagccgctactacgtacgtacgcacgccgcgatgtcgggggacgcgttcaacatgtcggtggcgtaccagccgtcggggatggcggtgccggagtggctgaacaagggcgacaacgcgtggcagatgatctcggcgacgctggtggggatgcagagcgtgccggggctggtgatcctgtacggcagcatcgtgaagaagaagtgggcggtgaactcggcgttcatggcgctctacgccttcgccgccgtgtggctgtgctgggtcacctggggctacaacatgtcgttcggccacaagctcctcccgttctggggcaaggcgcggccggcgctgggccagagcttcctcctcgcccaggccgtgctcccgcagacgacgcagttctacaagggcggcggcggcgccgacgccgtggtggagacgccatgggtgaacccgctctacccgatggccaccatggtgtacttccagtgcgtgttcgccgccatcacgctcatcctcctcgccggctcgctgctggggcggatgaacatcaaggcgtggatgctgttcgtcccgctctggctcaccttctcctacaccgtcggcgccttctcgctgtggggcggcggcttcctcttccactggggggtcatggactactccggcggctacgtcatccacctctcgtcgggtgtcgccggcttcaccgcggcgtactgggtggggcccaggtcgaccaaggacagggagaggttcccgccaaacaacgtgctgctcatgctcaccggcgccggcatactgtggatggggtgggcggggttcaacggcggcgacccgtactccgccaacatcgactcctcgctcgccgtgctcaacaccaacatctgcgccgccaccagcctcctcgtctggacttgcctcgacgtcatcttcttcaagaagccgtccgtcatcggcgccgtccagggcatgatcaccggcctcgtctgcatcactcccggcgcaggtaccatcacactatatatgcatgctcctcatcgcttgcaccagtgcaccgcccatgcttaatctacacacagtacactaggtgatcttcgatcgtttatactgaaaatgaattttgggcgaaaaaaaaacattagacatgactaattgagttttatacttattattactttctccttttcataatataaatcgttttggatgtttttttaaaaaaaatcttttaagtttgaataagtttataaaataatttagcaaacatctacaaaatcattagtttcactaaatatagcattagatatattttaataatacatttgttttgtattgaaaaatattattatattttttagagtgaatttcacctgacccatatattatggtcataagttgcacaaaatcacaaagtttcacaaaaccacactcttgattattttgattttggtctaccatacttttgagttctataatcaaatttcaagtttatgagttattatctatcatataaatgttacatctatgttagttaaactttttaaaattttgatacaggagtttgtcaatttggttaatggcgtagttttgtgaaactttagaactataatacccggggttacgttccacgtgctatggttttgcgtaaattggtccataatagatgatgctttataaaatttactctattttttgataaactcgattaaactttaagaagtttaactaggaaaaggtcatatgaaacggatggagtataaacttgaaaatagatttatctgaaattttaaaccgagttagtaaaatctgtatctggggctgggcgtaactgatccgtcttgaacggcgtctgcatatgcatggtcgatcaggcctggtgcagggttgggcggcgatcgtgatgggcatcctctccggcagcatcccgtggttcacgatgatggtggtgcacaagcggtcgcgcctcctgcagcaggtggacgacaccctgggcgtcttccacacccacgccgtcgccggattcctcggcggcgccaccacgggcctcttcgccgagcccgtcctctgctccctcttcctccccgtcaccaactcccgcggcgccttctaccccggccgcggcggcggcctccagttcgtccgccaggtggccggcgccctcttcatcatctgctggaacgtggtggtcaccagcctcgtctgcctcgccgtccgcgccgtggttcccctccggatgcccgaggaggagctcgccatcggcgacgacgccgtgcacggggaggaggcgtacgcgctgtggggcgacggcgagaagtacgactccaccaagcacggatggtactccgacaacaacgacacgcaccacaacaacaacaaggccgcgcccagcggcgtcacgcagaacgtctgatgatacgtgtcggtttttttttcttttcctttcctttttggggttgtatacgttacgaaatgctgcggtttcctgtcgtggaataatgtggtggtggttctgaaacgggtttcttcttcgggatgctctggtttgatgatttcgaccattcgagatttaatacagcggctactttcttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0870300, RefSeq:Os01g0870300