Os01g0874800

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Revision as of 05:13, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0874800| Description = 5'-3' exonuclease domain containing protein| Version = NM_001051494.1 GI:115441358 GeneID:4324772| Length = 2610 bp|...")
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Gene Name

Os01g0874800

Description

5'-3' exonuclease domain containing protein

Version

NM_001051494.1 GI:115441358 GeneID:4324772

Length

2610 bp

Definition

Oryza sativa Japonica Group Os01g0874800, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39712226..39714835

Sequence Coding Region

39712850..39712859,39713227..39713337,39713553..39713775,39713879..39714113,39714229..39714360
,39714453..39714818

Expression

GEO Profiles:Os01g0874800

Genome Context

<gbrowseImage1> name=NC_008394:39712226..39714835 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39712226..39714835 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccacctcccgccgtgagcacggcgccggtagctccggtcgtcgcgtcgtcgtcatcggcggcggcggcggcgccccgtagacctcgctcgctccgcctccgcgtgaccccgtacgcctccgtatcctcgtcgtcctccccttccaccttcgccgtctccatcccaccgccgcctccagcgaggcattcccgcaagcagctggtgggcagggacggcgcccccgcgaagcccgcgaaacctcgggtgttcttcctcgacgtcaaccctctctgcttccgcggatcccagcgcagcctcggcgccttcgcgcgctggctcgcgctcttcttcgcgcacgtcagcctccgcgaccccgtcgtcgccgttttggacggggagggcgggaacgagtaccggcggcggctgctaccgtcctacaaggcgcaccgacctcgtggccctggtacaggcgccgattcgcgcgttatcgatgttcttcgcgagtgcaatgttccggtcgtcagagtcgatgggtatgaggcagatgatgtagtggctaccttaacagagcaagttttacagaaaggttttagagttgtcattggctcaccagataaagacttcaagcagctgatatctgaagatgttcagttagttatgcccattcctgagattggccgttggtccttttatacgctgaggcattatgttgcacagtacaagtgtgacccaaccgcagatttgagcctcaggtgcttcataggtgatgaagcagatggtattccaggaatacagcaccttgttcctggttttggtcggaaaactgcagtgaaacttctaaagaaacatggttcattggaaaatttgcttaatacagctgcagttagaactgttggcaaggactatgcccaggatgctctagttaagcatgcagattacctgcggaaaaattatgaagttctcagcttgaagagggatgtaaaagttcagcttgatgacagatggttatccacaagggactcttgcaacgacagcagtgttttgtctgacttcatccttaaatttaacgaagggcagaatatcagaggaaattag</cdnaseq>

Protein Sequence

<aaseq>MPPPAVSTAPVAPVVASSSSAAAAAPRRPRSLRLRVTPYASVSS SSSPSTFAVSIPPPPPARHSRKQLVGRDGAPAKPAKPRVFFLDVNPLCFRGSQRSLGA FARWLALFFAHVSLRDPVVAVLDGEGGNEYRRRLLPSYKAHRPRGPGTGADSRVIDVL RECNVPVVRVDGYEADDVVATLTEQVLQKGFRVVIGSPDKDFKQLISEDVQLVMPIPE IGRWSFYTLRHYVAQYKCDPTADLSLRCFIGDEADGIPGIQHLVPGFGRKTAVKLLKK HGSLENLLNTAAVRTVGKDYAQDALVKHADYLRKNYEVLSLKRDVKVQLDDRWLSTRD SCNDSSVLSDFILKFNEGQNIRGN</aaseq>

Gene Sequence

<dnaseqindica>1977..1986#1499..1609#1061..1283#723..957#476..607#18..383#aaccgagcgccatcgcgatgccacctcccgccgtgagcacggcgccggtagctccggtcgtcgcgtcgtcgtcatcggcggcggcggcggcgccccgtagacctcgctcgctccgcctccgcgtgaccccgtacgcctccgtatcctcgtcgtcctccccttccaccttcgccgtctccatcccaccgccgcctccagcgaggcattcccgcaagcagctggtgggcagggacggcgcccccgcgaagcccgcgaaacctcgggtgttcttcctcgacgtcaaccctctctgcttccgcggatcccagcgcagcctcggcgccttcgcgcgctggctcgcgctcttcttcgcgcacgtcagcctccgcgaccccgtcgtcgccgtgagcacgcactcccagaccccaacgaaggaatcgtccttacatgctcctctcagctagtcacttatgaaattatctctgcttcgtgttaggttttggacggggagggcgggaacgagtaccggcggcggctgctaccgtcctacaaggcgcaccgacctcgtggccctggtacaggcgccgattcgcgcgttatcgatgttcttcgcgagtgcaatgttccggtaggtgaaccagatcttttatatacagattactaaaatcgagaaatcggcaacgttttcttaggtagagctctgagtttctgacgctgaacaaatctgcaaacggcaaattcaggtcgtcagagtcgatgggtatgaggcagatgatgtagtggctaccttaacagagcaagttttacagaaaggttttagagttgtcattggctcaccagataaagacttcaagcagctgatatctgaagatgttcagttagttatgcccattcctgagattggccgttggtccttttatacgctgaggcattatgttgcacagtacaagtgtgacccaaccgcagatttgagcctcagtgagtatatgtctatattttatgtattatcctacaatgtaaagttaattttatcattattaggaaatctagctaactgatgcatcgaagctattctgcacagggtgcttcataggtgatgaagcagatggtattccaggaatacagcaccttgttcctggttttggtcggaaaactgcagtgaaacttctaaagaaacatggttcattggaaaatttgcttaatacagctgcagttagaactgttggcaaggactatgcccaggatgctctagttaagcatgcagattacctgcggaaaaattatgaagttctcagcttgaagaggtatgcttttttcagtaatcatgaatattcaaatcttatgtctggttgtcctacattgttataagtacttaatgtcttcattctttgttgccatatagatggtttaatgccctactgagctgcagagcttacctacagtttcttttatcaagtctatcttgaagtgtaggtagcactcctaatagcaaatgaacttatgctttctcctagcacagggatgtaaaagttcagcttgatgacagatggttatccacaagggactcttgcaacgacagcagtgttttgtctgacttcatccttaaatttaacgaagggcagaatatcaggtaaaactcaaattctgtaccgaccatgtttcttcatcacaatctctatgtaaattcaataaaaacgaggagttggtagttgaaatattagttagaaatagctagttcctgtcactctgattgtgccgttcacttgttttggtatttttttagtttttttttcagagaattttgtaacatatcctttctggtaaaaatatgaaaatggaaatctttctacactggccattaaatagatgaatttacttgcccaactcagagtacctggatcaccttggctatatgcagaaacttgtgaagtcaatctttttggtgtggttggttctaggagtaaactgaaattagtatattcttcttctttttgcagaggaaattagtgtattcttggatccatcaaataactccttgctacgggattcctgataagttattcttcttttagcggcctattgttgtagtatcatttcagaaatgcagttcattatagatgcagagtagaaatcgcattgccagcattacagtcgttttcccccaagtcactcatgccctgggctagatatagcatacgtgagatgtactgcctcttcagtttggttaatgttgtagtctagtgctaggactgtaattttgtatcagtagccgttcaaggttctagaagagcaaggagtagtatctaaccaagtaccaacccacattttgataccaagtgcgtggttatgtgcaagctatactgagtcatcaaacagctgcctactcaattcttctcgtctgtcacactatcaacatagcttaaaccaagaagattcaagaagtagcaaagtgtgcattctgaagggcagtcgtgatgatatattgatatgaagtgtcctccgatgcttttagtgagaattggatcttcagggttttttctttctggcattctgcaatgttattaaggtgtagcggcagtttagggtactactccctccggtcacaaataaataacattttgaaatgcgtac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0874800, RefSeq:Os01g0874800

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os01g0874800&oldid=27762"