Os01g0875000

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Revision as of 05:13, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0875000| Description = Conserved hypothetical protein| Version = NM_001051496.1 GI:115441362 GeneID:4324774| Length = 1363 bp| Definition ...")
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Gene Name

Os01g0875000

Description

Conserved hypothetical protein

Version

NM_001051496.1 GI:115441362 GeneID:4324774

Length

1363 bp

Definition

Oryza sativa Japonica Group Os01g0875000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39724819..39726181

Sequence Coding Region

39725019..39725648,39725804..39726130

Expression

GEO Profiles:Os01g0875000

Genome Context

<gbrowseImage1> name=NC_008394:39724819..39726181 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39724819..39726181 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacgccttcttcacgtcgctggcgagagggctggacgacctgagcagcggcggcgggctgtcgtcgctgccggcgctgctgcgggcggcggcgctgctcagggggctgcactcgcagctcacgctgctggtggggcagctccacctgccgcccggtgggcggtggctcgacgagtacatggacgagaccgcgcggctctgggaggcttgcctcgccgtcaaggtcggccttgccgccgtcgagcggtattgcgctgccgcgtcttgtgctgcggccgccatggatgactggctccaggacccttcccctctctccactcgccaggtgatgagggcgatctctgcgtcgaggagggaggccatggcggcggaggaggagaaccgtgcgctgtcggaggcgaggatcgcgccgctgtcgctgcagctcgacgagcggctgctgctgcgcgccgcggacgccaggttgagcggcttcaacggcttccgcggcctgctctacgcgctgcacaacgccagctcgctgctgctcctcgtcctcgcctccggcgccgtctcctgcgccgccgccgcagcggggccgtgctccgcggatggcgccgcggacgccggcgggttcgtggcgtccatcgcaatgctgcagcagaggatggcggaggaggccgacgccgacggtagcgccggcgcggcgcgggggggcatccggatgtacgagttccggtgcgcgcgcgccgccgtggaggcggcgcacgaggaggtggagcgcgccgtggcggcgggcccccgcaagcagcagtgcgaggacggcgacggcggcgtcaaggacaaggtcgacgagctcaaggcgtggctcgacgtgctccggaccggcaccgacggcctcgtctgccagctcgacgacttcctcgacgacattgtcgagggcaggaaggagctctccgacctttgcagccactga</cdnaseq>

Protein Sequence

<aaseq>MNAFFTSLARGLDDLSSGGGLSSLPALLRAAALLRGLHSQLTLL VGQLHLPPGGRWLDEYMDETARLWEACLAVKVGLAAVERYCAAASCAAAAMDDWLQDP SPLSTRQVMRAISASRREAMAAEEENRALSEARIAPLSLQLDERLLLRAADARLSGFN GFRGLLYALHNASSLLLLVLASGAVSCAAAAAGPCSADGAADAGGFVASIAMLQQRMA EEADADGSAGAARGGIRMYEFRCARAAVEAAHEEVERAVAAGPRKQQCEDGDGGVKDK VDELKAWLDVLRTGTDGLVCQLDDFLDDIVEGRKELSDLCSH</aaseq>

Gene Sequence

<dnaseqindica>534..1163#52..378#agacgcatcgatcgaccggtgttcgatctttcttgctgtggggatttcgccatgaacgccttcttcacgtcgctggcgagagggctggacgacctgagcagcggcggcgggctgtcgtcgctgccggcgctgctgcgggcggcggcgctgctcagggggctgcactcgcagctcacgctgctggtggggcagctccacctgccgcccggtgggcggtggctcgacgagtacatggacgagaccgcgcggctctgggaggcttgcctcgccgtcaaggtcggccttgccgccgtcgagcggtattgcgctgccgcgtcttgtgctgcggccgccatggatgactggctccaggacccttcccctctctccactcgccaggttggttggttgcgaaacgtgtttgtttctgtgctgcgacacgccattagtggttcttgctctgtttgtgtgtttgatcgattgatcgctactatgtgttctttgttggatgctctgtttttttgtgtttatggagatttgtttgatcggtgcaggtgatgagggcgatctctgcgtcgaggagggaggccatggcggcggaggaggagaaccgtgcgctgtcggaggcgaggatcgcgccgctgtcgctgcagctcgacgagcggctgctgctgcgcgccgcggacgccaggttgagcggcttcaacggcttccgcggcctgctctacgcgctgcacaacgccagctcgctgctgctcctcgtcctcgcctccggcgccgtctcctgcgccgccgccgcagcggggccgtgctccgcggatggcgccgcggacgccggcgggttcgtggcgtccatcgcaatgctgcagcagaggatggcggaggaggccgacgccgacggtagcgccggcgcggcgcgggggggcatccggatgtacgagttccggtgcgcgcgcgccgccgtggaggcggcgcacgaggaggtggagcgcgccgtggcggcgggcccccgcaagcagcagtgcgaggacggcgacggcggcgtcaaggacaaggtcgacgagctcaaggcgtggctcgacgtgctccggaccggcaccgacggcctcgtctgccagctcgacgacttcctcgacgacattgtcgagggcaggaaggagctctccgacctttgcagccactgatcgatcgactgcaacaccatcatcatcgccatggatgatggcatgaaatgcttcatgcttcgcgtggtagagtactcgtactgtacgtagtagtagcaagcataatcttcagtagcgagtacgagtagtagttagtggtactcgatgagacagagtgtgtcgctgtcacagcattttgctcatgatgttgttgttgctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0875000, RefSeq:Os01g0875000