Os01g0882800

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Revision as of 05:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0882800| Description = Similar to Amino acid carrier (Fragment)| Version = NM_001051545.1 GI:115441460 GeneID:4324999| Length = 3044 bp| D...")
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Gene Name

Os01g0882800

Description

Similar to Amino acid carrier (Fragment)

Version

NM_001051545.1 GI:115441460 GeneID:4324999

Length

3044 bp

Definition

Oryza sativa Japonica Group Os01g0882800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40066435..40069478

Sequence Coding Region

40066665..40067461,40067544..40068086,40068170..40068296

Expression

GEO Profiles:Os01g0882800

Genome Context

<gbrowseImage1> name=NC_008394:40066435..40069478 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40066435..40069478 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggagaacgtggttggcacgtactactacccgccttcggcggccgccatggacggcgtggagctcggccacgccgccgccggctccaagctcttcgacgacgacggccgccccaggcgcaacgggacgatgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggggtgggccatcgcgcagctcggctgggtggccgggccggcggtcatggtgctcttctccctcgtcacctactacacctcatccctcctctccgattgctaccgctccggcgaccccgtcaccggcaagcggaactacacctacatggacgccgtgaacgccaacctgagcgggttcaaggtgaagatctgcgggttcttgcagtacgccaacatcgtcggcgtcgccatcggctacaccatcgcggcgtccatcagcatgctggcgatcgggagggccaactgcttccacaggaaggggcacggcgacccgtgcaacgtctccagcgtgccctacatgatcgtcttcggcgtcgccgaggtcttcttctcgcagatccccgacttcgatcagatctcctggctctccatgctcgccgccgtcatgtccttcacctactccgtcatcggcctcagcctcggcatcgtccaagtcgtcgcgaacggagggttgaagggaagcctgaccgggatcagcatcggcgtggtgacgccgatggacaaggtgtggaggagcctgcaggcgttcggcgacatcgcgttcgcctactcctactcgctgatcctcatcgagatccaggacaccatccgggcgccgccgccgtcggagtcggcggtgatgaagcgcgccacggtggtgagcgtggcggtgaccacggtgttctacatgctctgcggcagcatggggtacgcggcgttcggcgacgacgcgccggggaacctcctcaccgggttcggcttctacgagcccttctggctcctcgacatcgccaacgccgccatcgtcgtccacctcgtcggcgcctaccaggtgttctgccagccgctcttcgccttcgtcgagaagtgggcggcgcagcggtggccggagtcgccgtacatcaccggggaggtggagctccgcctctcgccgtcgtcgaggcggtgcagggtgaacctgttccggtcgacgtggcgcacggcgttcgtcgtcgccaccacggtggtgtccatgctgctgcccttcttcaacgacgtggtcggcttcctcggcgcgctcggattctggccgctcaccgtctacttccccgtggagatgtacgtggtgcagaagaaggtgccacggtggagcacacggtgggtgtgcctgcagatgctcagcgtcggctgcctcgtcatctccatcgccgccgccgcgggctccatcgccggcgtcatgtcggatctcaaggtttaccgcccgttcaagggttactga</cdnaseq>

Protein Sequence

<aaseq>MGENVVGTYYYPPSAAAMDGVELGHAAAGSKLFDDDGRPRRNGT MWTASAHIITAVIGSGVLSLGWAIAQLGWVAGPAVMVLFSLVTYYTSSLLSDCYRSGD PVTGKRNYTYMDAVNANLSGFKVKICGFLQYANIVGVAIGYTIAASISMLAIGRANCF HRKGHGDPCNVSSVPYMIVFGVAEVFFSQIPDFDQISWLSMLAAVMSFTYSVIGLSLG IVQVVANGGLKGSLTGISIGVVTPMDKVWRSLQAFGDIAFAYSYSLILIEIQDTIRAP PPSESAVMKRATVVSVAVTTVFYMLCGSMGYAAFGDDAPGNLLTGFGFYEPFWLLDIA NAAIVVHLVGAYQVFCQPLFAFVEKWAAQRWPESPYITGEVELRLSPSSRRCRVNLFR STWRTAFVVATTVVSMLLPFFNDVVGFLGALGFWPLTVYFPVEMYVVQKKVPRWSTRW VCLQMLSVGCLVISIAAAAGSIAGVMSDLKVYRPFKGY</aaseq>

Gene Sequence

<dnaseqindica>2018..2814#1393..1935#1183..1309#acacaccacaccaagctctcaccaagctggacatatatatcttgccattttgctgatccattttctgcttaattgctcggttaatccctgcaaggggagtagaactgaagcaggagatcgagcagctatcttcttcagagaaaggtaatttagctagccatgcattggaaaggatctgtaaatgtgttgcacgcacgcactgaggtagcaagtggtagaatgcaggagactgttgccatcttatcttagctcttatgatgcgaaaatcgatatctgttacagtgaagttttcggctatctgactgacctttgcgcgtcagcgaaattgagtggtgttgccgcgctgtgatgatcctttttttttgtgtgtgtgctatatgcgtgtgaggaccgttgactcggatgctggggtaacagtgtggtgtggcaagtaggtacaccctgttcgcccgttgacccccataaacacatgaaaatcgtagtgcctcaagacttcaagaatagtcaagtctgaacaaaattgtacacctgaacagtaaccctttaggattttgccatttgatgtcttctatcatatctttgccaaaaccagaccatctgacataatcgcccttgtgactcagcgatcacatttatctagctctatatcagatgatctggttacatttttatccatcatctctatgtctatgtgaacttgtgaagtagatatatagatttttttttcttttgataaaagatgatatctttttacgggtttatttggtagaactataacttctagattctggtggaaaatagggctaactccagctttaaatttttaagaatcatatattcctcttactcttaggccagcgttcaatgtccactctagctgtgcaatttgcagtgtatcacctttctccccaacaaggccaccagccaccgttcccggcagccgccgcccggcccctcgttgccgacatggtcctgcacccacttcgctcgcgcgcgcgcgcgcgccgccggcgcctataaatcgcaaccccaccccggcctcacccaccacctcgcacttgcattgcagaattcgcacatgcatctacgtgcataggtcacagcctcctgctgctgctgcacactgcttgctgtgtgttgctgagccgtgcactctgtgttgccagctgatcagctgagaccatgggggagaacgtggttggcacgtactactacccgccttcggcggccgccatggacggcgtggagctcggccacgccgccgccggctccaagctcttcgacgacgacggccgccccaggcgcaacggtaagcgcatgcacgcagcacacggcgtacgtgattaatcaagcttcttgctgatggtcgctgactgacggcggtgggtgcagggacgatgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggggtgggccatcgcgcagctcggctgggtggccgggccggcggtcatggtgctcttctccctcgtcacctactacacctcatccctcctctccgattgctaccgctccggcgaccccgtcaccggcaagcggaactacacctacatggacgccgtgaacgccaacctgagcgggttcaaggtgaagatctgcgggttcttgcagtacgccaacatcgtcggcgtcgccatcggctacaccatcgcggcgtccatcagcatgctggcgatcgggagggccaactgcttccacaggaaggggcacggcgacccgtgcaacgtctccagcgtgccctacatgatcgtcttcggcgtcgccgaggtcttcttctcgcagatccccgacttcgatcagatctcctggctctccatgctcgccgccgtcatgtccttcacctactccgtcatcggcctcagcctcggcatcgtccaagtcgtcggtacgcacgccatgatccatcatccaaagcttcttgatcaatgtgttcgttgcgctgacaagcatggcgtcgcggtgtgcagcgaacggagggttgaagggaagcctgaccgggatcagcatcggcgtggtgacgccgatggacaaggtgtggaggagcctgcaggcgttcggcgacatcgcgttcgcctactcctactcgctgatcctcatcgagatccaggacaccatccgggcgccgccgccgtcggagtcggcggtgatgaagcgcgccacggtggtgagcgtggcggtgaccacggtgttctacatgctctgcggcagcatggggtacgcggcgttcggcgacgacgcgccggggaacctcctcaccgggttcggcttctacgagcccttctggctcctcgacatcgccaacgccgccatcgtcgtccacctcgtcggcgcctaccaggtgttctgccagccgctcttcgccttcgtcgagaagtgggcggcgcagcggtggccggagtcgccgtacatcaccggggaggtggagctccgcctctcgccgtcgtcgaggcggtgcagggtgaacctgttccggtcgacgtggcgcacggcgttcgtcgtcgccaccacggtggtgtccatgctgctgcccttcttcaacgacgtggtcggcttcctcggcgcgctcggattctggccgctcaccgtctacttccccgtggagatgtacgtggtgcagaagaaggtgccacggtggagcacacggtgggtgtgcctgcagatgctcagcgtcggctgcctcgtcatctccatcgccgccgccgcgggctccatcgccggcgtcatgtcggatctcaaggtttaccgcccgttcaagggttactgataactgatcggatcacgtacgcacccagaacgacacgtcaaaaaaatcaaaattgcccttctcgtagaaggaaaaccaaattcacttcacacgattaaacccaaaacgaaaaaaaaggagcagtgatcagacgctaagggaaaaaaaagtgtaagtgcgtgtcactgttgatgtactgtaaaagataatttatgaaggaaaaagataaggaaatggaagtgcctctctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0882800, RefSeq:Os01g0882800