Os01g0889200

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Revision as of 05:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0889200| Description = RNA polymerase III RPC4 family protein| Version = NM_001051580.1 GI:115441530 GeneID:4324905| Length = 4219 bp| Def...")
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Gene Name

Os01g0889200

Description

RNA polymerase III RPC4 family protein

Version

NM_001051580.1 GI:115441530 GeneID:4324905

Length

4219 bp

Definition

Oryza sativa Japonica Group Os01g0889200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40415236..40419454

Sequence Coding Region

40415479..40415631,40415713..40415928,40416008..40416144,40416237..40416289,40416389..40416426

Expression

GEO Profiles:Os01g0889200

Genome Context

<gbrowseImage1> name=NC_008394:40415236..40419454 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40415236..40419454 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cactgccacagtcaggagggcacaaccaaggccaactggaagaagaagccattccacatcacaagagcggttcctcttgatgctattccaggatttttatacgacgatgaggatgatgatgacgacgacgacgatgagggcgataacaatgttgaattagaggagattcgaccaagttcaactgaatgtgaatcttccatccatccagcagaagagctgaatttactcgagcaaggtgacacgagaagaatgctcctattccagttgccaaaatctcttccgttgccaagaatatccgctgcagttgaaaggaatggaaaagccagggacaaggaggtgaaagaaggatccaacttgaaagaattgccacaaggatatttgggcaaaatggtggtgtacaagagcggcaagatcaagatgaagttgggggatgtcatgtttgatgtgaacccaggagaagagtgtaggatggcacaacatgtggctgctatcaacaccaaagagaagcattgttgtttacttggcgagatcgagagccggcatgtcgttgtgactccagatgtggactcgctgctgttgaatgacaatagaggttag</cdnaseq>

Protein Sequence

<aaseq>HCHSQEGTTKANWKKKPFHITRAVPLDAIPGFLYDDEDDDDDDD DEGDNNVELEEIRPSSTECESSIHPAEELNLLEQGDTRRMLLFQLPKSLPLPRISAAV ERNGKARDKEVKEGSNLKELPQGYLGKMVVYKSGKIKMKLGDVMFDVNPGEECRMAQH VAAINTKEKHCCLLGEIESRHVVVTPDVDSLLLNDNRG</aaseq>

Gene Sequence

<dnaseqindica>3824..3976#3527..3742#3311..3447#3166..3218#3029..3066#atttgttccaaaccagtggaaagctagggttccgctgactcgcgagtggagggcgctgctcgtcgccaggctcgtcgcgccgtcctcgccggcgggagggccggtcgtccgtcagcatcctctcttccgttggtcatcctccctctctttcgctagccgccatcgctctcttccactggttcgctctctccgtcaagccgtttggtttcgccggctctctgctacgcccctctctttcgtcgactctctccgttgagctctctggtaagggctaggttgggcatctccttccctttctcacctccttcagtttcttctcctctcttcctttgatttcagccgatttgtttggattagaccgtgtccccttcataaatatgctagatctactccattatctaaaaaaaatgctagatctactaaaagctgatatctttcttggttgatttcgatggaatgaaatgtctagtggcttgcttttttgttctaagatggccaatgatgactaatgttgctgatttgtgatgcttatgaacagatttttcctacacttattcctattttcctgttgatttgtgttatgccattgtatctttggctacaaatagaagttactgataaggccagattcaatagtgcgttcttttaaattgatactgacagatacacacttgattaatagtgcttatttgtgatgcataagaacatatatgcctgcacttgaccttattcgataaggtcaggcaaccaaacatgccctttctaagtttgtctttctgtgatctttctcagtattttatagttgaaattatctttagcagaactgaggccacctctacacttgaactgagcagaatttataagagtacatgaacagatttttctacacttgttcttttttcttgctgttaggctgggaaagatggccaatgatgatatatgctgctgtttgtgattcatgtgaatagatttttgctctacacttgttctcattttcttgcggtttcttttttcctacacttggtcttattttccttttccttataccttttcttttgctacatttgatagatactactggtaagaacagataccaatgatagtagctaattcacattcttcatatatctgaggccattgttctgcatttatttacctgttggaaatgaggctcaatgatgtcaaatttctgcacatatttgctacattttcgagttattgatgtcaggcaaatactatcaagttccttgttcatcttttgatatcaacagatgtactcactttttttaggtaaccacacttgattttgacatgatcaagtttttatatgaaaccgatacactctgcacttgctcttttggtaaagatcatactactattaagtgttgatgctcttgcaacctgatctctgcaactcagatcctgtactatttcaaaggtacatgttatcctgtttacttttactatgtttcaggaaaatgtgataatggaaaaacttgtgagatcaagtgtagatatactaaggttgatgagtttgaagaacatagctgaaacagatggtttagttttgtatgcggttactaatttgtttatcaaattggttactgtaaaaaatttgccatgagcacgtatatttgtatgtttgttttgaattgtcaaatgtaccagtgtcgtcaataaaattatgtacatgatttttgctagaataatcactcttgcgtgttcatccaggccatttcgttacatttgataaaaaaaatgatcatcagtgctgctcattggttttaaaaaatgacaacatcagtaaagcatacatacccagtacatcgattctctaagagaaaaatgagcttaggaatattagtaggtgggcacagacccagagtaacataatttaatctatatatctacgatggattaaacttatcacacataaatagattagggactaggaaaaaatctcgtttcacaaactttatggggtaacctaaccacccacaagaataggtatttacacataagatgtatccatccaaccaaacaacatctcctgcatgctaccattccatccgccccttgctgcaaccaaccaaacagcatctcatcatatccaggttcatctcatccaagcaaccaaacacctacatgtgtatcctctaaaccaggctaaacttagcctggatgagggagatgggccaggctagagggatacgagcaaccaaacagacccttactgcataatcttcaccttctgtaaaccctctcactgagcaattggatatagggagtaagtggaaatggatgcagatggtagctccaagaaaggccctccaggtcgtcgcactagaaaggtgggcacaccaattatgattattttttggcattgtctttataggctaacatgtatttttttttccataaaattctaatggatgcagaagctgaagttcaagccaaaagtgccaccacaaaagccaagaaaatcagttccagaaaagtaaagctctaaagtttgttcagctgaatatgacagactttcagtttaccatagacaagcttattctgttctttcaggccaaacctggaacagtcaaagccaattgatgaagaattgatgaagagactgaaggtaattgattattcgtttcataaactgaagacataatattgtactccctcccatcccaaaataagtgcagctgtgtagttcaaattttgggacggagggagtagttgtgtagagaggacaaaggttcctattgaacttctgtcttattttcagactggccaaggagctacaaaaacattgtcaagtataaaaggttgatctgtatccattgacctccacatgtatgtttagaacttagtattggtcctaagggcaagaagtctttcaattaaatgctttcaattagcagtaactgcaaacacatcagattctataatcctatttgcattgtgctcacagatgaacactcaacacagaacccaccctcaactgtttcttctgcagctagtgttagcttaacactgccacagtcaggagggcacaaccaaggccaactggtgagttcaccaacctctcaaggtcaacttgatcacctggaaaaatacccaatgtctttttgacagacacatgactttgtttgtctattttctatggaggaagaagaagccattccacatcacaagagcggttcctcttgatgctattccaggtaactttcttaaggcttcattagctccattgctctggataattgcccagtacattccacaggaatctcataagaatgtaagctcttctcaggatttttatacgacgatgaggatgatgatgacgacgacgacgatgagggcgataacaatgttgaattagaggagattcgaccaagttcaactgaatgtgaatcttccatccatccagcagaagagctgaatttactcgtatgaccttctgagctctatgaaataccacgatattgtctgccactgggagtagttgatttataatttagaacaacaggagcaaggtgacacgagaagaatgctcctattccagttgccaaaatctcttccgttgccaagaatatccgctgcagttgaaaggaatggaaaagccagggacaaggaggtgaaagaaggatccaacttgaaagaattgccacaaggatatttgggcaaaatggtggtgtacaagagcggcaagatcaagatgaagttgggggatgtcatgtttgatgttagtttctttccgttctcatttaacttcacaatctggtaacttggtaagatctctgatacttaagttcttccatggcaggtgaacccaggagaagagtgtaggatggcacaacatgtggctgctatcaacaccaaagagaagcattgttgtttacttggcgagatcgagagccggcatgtcgttgtgactccagatgtggactcgctgctgttgaatgacaatagaggttaggtaattacgtgtgcataagtgcattggtcagctgtgagctacagtcctgcaatgacttgccagattagtgtgcatagctagcaatgtgcattttaactgtatttgtagcggttgtaaaattgtgtgcctttagaagatttgctgcttgtagtaaatgaatacttagcttagattgtacttatggtagtattgttgatgtgtcatgttatgatttttatggagatctcactaaagcttttatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0889200, RefSeq:Os01g0889200