Os01g0895500

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Revision as of 05:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0895500| Description = Rhomboid-like protein family protein| Version = NM_001051611.1 GI:115441592 GeneID:4324970| Length = 1186 bp| Defin...")
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Gene Name

Os01g0895500

Description

Rhomboid-like protein family protein

Version

NM_001051611.1 GI:115441592 GeneID:4324970

Length

1186 bp

Definition

Oryza sativa Japonica Group Os01g0895500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40684670..40685855

Sequence Coding Region

40684853..40685674

Expression

GEO Profiles:Os01g0895500

Genome Context

<gbrowseImage1> name=NC_008394:40684670..40685855 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40684670..40685855 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaagcctctgatctatgagatattggagaaaccagccagtagtagcgtgataggcatctgctccctgatctggttcttcatccagaagaggaacattgggtatggagatgttgggctgagctacgaggccgccatggaaggcgggcagtactggaggatcatcacctccgccttctcgcacatcagcgtggtgcatttggtgttcaacatgagtgcattgtggagccttggtgttgtcgagcagttggggcagattgggctcggtgttgagtactacctccattacacgcttgtgctcgtggtgctgtctggattgcttgttcttgggttctaccatgtgatgattcagaagttcaaggtggagtatttcaggagggtgaccgctgtcgggtactcgtgcgtcgtgtttgggtggatgacaattctggctacaaagcaaccgtcgtcgaagctgaatatcttcggggttctttcgctgcctatcagcttcgcgccgtttgaatcgctgatattcacatctatcatggttcctcaggcgagtttcattggccacttatcagggatcattgttggctactcaattgcctggggtttggttcatggaatgaataactattgggctatcaccatgtttggttggattgtgcttgtgtttgtcttgagcttgaagcgtacaggctcgatggatttgagatttattgagattgagccagttacggatccctcgctgccttctgttggcgtagttgcctcaagaaatggcaggactcttcagatggatgtgcttccgagaagaggagttgcagacattgtatga</cdnaseq>

Protein Sequence

<aaseq>MGKPLIYEILEKPASSSVIGICSLIWFFIQKRNIGYGDVGLSYE AAMEGGQYWRIITSAFSHISVVHLVFNMSALWSLGVVEQLGQIGLGVEYYLHYTLVLV VLSGLLVLGFYHVMIQKFKVEYFRRVTAVGYSCVVFGWMTILATKQPSSKLNIFGVLS LPISFAPFESLIFTSIMVPQASFIGHLSGIIVGYSIAWGLVHGMNNYWAITMFGWIVL VFVLSLKRTGSMDLRFIEIEPVTDPSLPSVGVVASRNGRTLQMDVLPRRGVADIV</aaseq>

Gene Sequence

<dnaseqindica>184..1005#agatttctcccgctaatttgctcatccgaccagccaaactgtcgcctcgcgatcagcatgtaccccaatccccgcataggctgcgtgctgggtagatctcttgccgtggaagtattgatcctgtcttgttcctgaccaactgaggattggagctttgtgattctgtgatcttcttgtggagatatgggcaagcctctgatctatgagatattggagaaaccagccagtagtagcgtgataggcatctgctccctgatctggttcttcatccagaagaggaacattgggtatggagatgttgggctgagctacgaggccgccatggaaggcgggcagtactggaggatcatcacctccgccttctcgcacatcagcgtggtgcatttggtgttcaacatgagtgcattgtggagccttggtgttgtcgagcagttggggcagattgggctcggtgttgagtactacctccattacacgcttgtgctcgtggtgctgtctggattgcttgttcttgggttctaccatgtgatgattcagaagttcaaggtggagtatttcaggagggtgaccgctgtcgggtactcgtgcgtcgtgtttgggtggatgacaattctggctacaaagcaaccgtcgtcgaagctgaatatcttcggggttctttcgctgcctatcagcttcgcgccgtttgaatcgctgatattcacatctatcatggttcctcaggcgagtttcattggccacttatcagggatcattgttggctactcaattgcctggggtttggttcatggaatgaataactattgggctatcaccatgtttggttggattgtgcttgtgtttgtcttgagcttgaagcgtacaggctcgatggatttgagatttattgagattgagccagttacggatccctcgctgccttctgttggcgtagttgcctcaagaaatggcaggactcttcagatggatgtgcttccgagaagaggagttgcagacattgtatgacttgcaaagtgggatgctcaatcgctgaaatgttttatagatagtcctaaacttctctgaaaattttcagacattgtattacttgcagagtggaatactcggccgctgaaatgttcgatagatagtattgttcaagccctgaattgtatcatgctgattcaatactatacttccagttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0895500, RefSeq:Os01g0895500