Os01g0898400

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Revision as of 05:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0898400| Description = Conserved hypothetical protein| Version = NM_001051628.2 GI:297598117 GeneID:4325110| Length = 1831 bp| Definition ...")
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Gene Name

Os01g0898400

Description

Conserved hypothetical protein

Version

NM_001051628.2 GI:297598117 GeneID:4325110

Length

1831 bp

Definition

Oryza sativa Japonica Group Os01g0898400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40819547..40821377

Sequence Coding Region

40819558..40819612,40819695..40819979,40820100..40820182,40820576..40820663,40821001..40821104

Expression

GEO Profiles:Os01g0898400

Genome Context

<gbrowseImage1> name=NC_008394:40819547..40821377 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40819547..40821377 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcgcgggctccaatcgccatccaaaacgagaacctgccgatctttcgcgggatcgatggcaagaaggccggggcggcggcgagggtggggcggcaggagcgcagagccctaggtgatctcagcaaggcccggagagctcggccggcgagctccacgggagggaaagctactgcagcagccagtgttgggggatctggtaagaatctggtgaagcctagctacctgagcgatgaggattggatgaaatgctgcgagtgggcgaaggatggggttgaaactgccagttttactgggaacgatatgcagaaactgctcagtgataagctggaagagcgcatacagaagaaggtggagaaggcaatggggacgatgcaactctccatggacagtctttaccgcatcgatgcgcattcaaaggcatgcatggtggatcctgaagataaaacagaactggatcttgatacagaatttcttcctccaatgtcatacttaagctcaagactaggtgaacacaacgccaatcatgttctttctgacttggaattcgaacatgaaacatttgctaattgcaatttagacttgaagctcaaggaagaatatggaacataa</cdnaseq>

Protein Sequence

<aaseq>MASRAPIAIQNENLPIFRGIDGKKAGAAARVGRQERRALGDLSK ARRARPASSTGGKATAAASVGGSGKNLVKPSYLSDEDWMKCCEWAKDGVETASFTGND MQKLLSDKLEERIQKKVEKAMGTMQLSMDSLYRIDAHSKACMVDPEDKTELDLDTEFL PPMSYLSSRLGEHNANHVLSDLEFEHETFANCNLDLKLKEEYGT</aaseq>

Gene Sequence

<dnaseqindica>12..66#149..433#554..636#1030..1117#1455..1558#ggtttcacaggatggcttcgcgggctccaatcgccatccaaaacgagaacctgccgatctttcgcggtgattatcccaccaccgtctccgaaaatccgcggcgagcgttttttcttgctctttgatttctttgctctttgatgcgaagggatcgatggcaagaaggccggggcggcggcgagggtggggcggcaggagcgcagagccctaggtgatctcagcaaggcccggagagctcggccggcgagctccacgggagggaaagctactgcagcagccagtgttgggggatctggtaagaatctggtgaagcctagctacctgagcgatgaggattggatgaaatgctgcgagtgggcgaaggatggggttgaaactgccagttttactgggaacgatatgcagaaactgctcagtgataagctggaagagcgtatgtttctgtttttttattttacttttatggatgcctttgtgccagtattcgcgtatgataagatgtagtacttactactgcctttttttatgtgtattattgggggtatgtaattaggcatacagaagaaggtggagaaggcaatggggacgatgcaactctccatggacagtctttaccgcatcgatgcgcattcaaaggtatagtgtggttcaagagtggcaaaacgtaatcacggcgatgtgccagaatggagaggagggatttcataagtaccctaagtattagtggcaatgaattaatatcattgagaagttttgaattgttgccaacaatgattttaagcatttctctctagttagcgggtatcttagcacggcactctcgaattacattagggttaggctgccttgatatttctatcctcacctaccattttgtgaatcttataagatggattattagcgtgtaggaatggtgataagtacaagctgatcttgttctgttaatgccatgagcacatgataatgtatagtaatatagtatgcatttgtgtactttcagttgataattgcactatttttgtatttcaggcatgcatggtggatcctgaagataaaacagaactggatcttgatacagaatttcttcctccaatgtcatacttaagctcaagactaggttctcttcttctgcacctcttacatgcactggcacatgtatatctgtggctggcaatttacaaaattgaatgattttctagtaaccttctacaaatgaattgagccactgtattcggctttcatcaatccagagccttgtttcttctccaaagagaacaagccattgctagaaactttatgcatgccgctctcctttcttctagcagaccttgtaactagttaaatgtacttctgtatagaaagttgcttgggatgttcgacgtgtgctggtgcatgaaaaatctttattttttttgggtaacttctgaaacaaacctattggtttttttttacaggtgaacacaacgccaatcatgttctttctgacttggaattcgaacatgaaacatttgctaattgcaatttagacttgaagctcaaggaagaatatggaacataatttcctgaggtctcatactcttgtagtacagtgtactgggatcatgttcaactcttagtacatctagttgtattgcaatttttttttgtttgtgttgtatctgttctcttaaccaatccaactattctgggcagccaaattgactcagatattttgttgtgttgctagttttccttcttgtagtgtaatgctatctctgtagactgtagttattcccattcacattttctggggacaccagttgttgaaatgagtttaacttggcttagtctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0898400, RefSeq:Os01g0898400