Os01g0899100

From RiceWiki
Revision as of 05:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0899100| Description = Peptidase C1A, papain family protein| Version = NM_001051634.2 GI:297598121 GeneID:4325030| Length = 900 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0899100

Description

Peptidase C1A, papain family protein

Version

NM_001051634.2 GI:297598121 GeneID:4325030

Length

900 bp

Definition

Oryza sativa Japonica Group Os01g0899100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40856896..40857795

Sequence Coding Region

40856896..40856938,40857023..40857234,40857784..40857795

Expression

GEO Profiles:Os01g0899100

Genome Context

<gbrowseImage1> name=NC_008394:40856896..40857795 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40856896..40857795 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagtgtctatggcaaccacaaacactgcaggggaaccagaagctttcaagtatctgaagacaagcgacagtgatgagaggatggagggctccaagaaggtgtctgaagacgaggagcaggccctgaaggtgagattccaagagtggatgaacaagttcaaccgtaattacaaagacgaggcagagaaggcttatcgctttgaggtattcaagtctactgtccagtatgtcgaaaagttcaatgctgaacagatagccaaataa</cdnaseq>

Protein Sequence

<aaseq>MEVSMATTNTAGEPEAFKYLKTSDSDERMEGSKKVSEDEEQALK VRFQEWMNKFNRNYKDEAEKAYRFEVFKSTVQYVEKFNAEQIAK</aaseq>

Gene Sequence

<dnaseqindica>1..43#128..339#889..900#atggaagtgtctatggcaaccacaaacactgcaggggaaccaggtacggacagctttgcctgaagtgaaatctctttttgtttcctcataattaacaagaaatgtctactatacctcataattacagaagctttcaagtatctgaagacaagcgacagtgatgagaggatggagggctccaagaaggtgtctgaagacgaggagcaggccctgaaggtgagattccaagagtggatgaacaagttcaaccgtaattacaaagacgaggcagagaaggcttatcgctttgaggtattcaagtctactgtccagtatgtcgaaaagttcaatgctgaacaggtgaaaaaatatggttgctgcaaatgcacactaggtacaaacaaatttgcggatctcactgtggaggaagtctcgaacaagttttgtggcaaaagaagcaggcagtgttagctcggtatattattattataggggcgtgttggctatattactattatagccaactagtctgcaactatgtaaaaaaacagcaactatatttattattattattatagccaactagtgtgcaactatgaaaaataacaacagcaactagtgtgctttctggttagaaacccgtagagatataagtgtaagtggttcgttgaaccagtggtgccttttgattatatatgtatcgtttatatgtaataataagtttatgttatactactatattggaaggaaataccccagttcattgtatataaattatagccatgaattatgggaagcacctggtgctgactgctgactgtatacacatttcagctgcttaacttggatcaaggccctggagtagcagttggctgtactggtaacctaccttgtgtgttgtgaatatagatagccaaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0899100, RefSeq:Os01g0899100