Os01g0901200

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Revision as of 05:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0901200| Description = Similar to RecA protein (Fragment)| Version = NM_001051644.1 GI:115441658 GeneID:4325041| Length = 5093 bp| Definit...")
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Gene Name

Os01g0901200

Description

Similar to RecA protein (Fragment)

Version

NM_001051644.1 GI:115441658 GeneID:4325041

Length

5093 bp

Definition

Oryza sativa Japonica Group Os01g0901200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40994698..40999790

Sequence Coding Region

40995063..40995455,40995764..40995898,40996358..40996504,40996719..40996891,40997789..40997876
,40998096..40998313,40998556..40998613,40999610..40999687

Expression

GEO Profiles:Os01g0901200

Genome Context

<gbrowseImage1> name=NC_008394:40994698..40999790 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40994698..40999790 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaacctcctgaggcgcgcgtcgctgcggcgcgccgtcgccgccgtcgcggcagcagccgcgccctgccccgagagctataagcaagggatctgtggctctactttccactgccggtatttctcgtctaaagccaaaaagaagacaaagtccagtggaactgactctggtgaagagaatctgtcaaagaaagacttggctctacaccaggctattgatcaaataacatctgcatttgggaagggcgcaataatgtggcttggtcgttctgaaggtcgtagagaagtacctgttgtgtcaactgggtctttctctttggatttggcattgggaactggtggacttccaaagggtcgtgttatagaggtgtatggtccagaagcttcaggcaagacaactcttgcacttcacgttattgcagaagcacaaaagcatggcggttattgtgccttcgtagatgcagagcatgccttagatccagctctggctgaatcaattggggtcaacaccagtaatttacttctctctcagccagactgtggcgagcaggcactcagtcttgtggacacactgattcgaagcggctctgttgatgttgttgttgttgatagtgtagcagctcttgtccctaagagtgagcttgacggggagatgggtgatgcacatgttgctctccaggctagattgatgagccaagctcttcgcaagctgagccactctctctcactttcccagacaattttgttattcattaaccagatcaggtctaaagtgaccacatttggaggatttggaggtccaatggaggttacttctggtggaaatgcccttaaattctatgcttccgttagaatgaacatcaagcgtattggtttggtaaagaaaggcgaagagactataggtagtcaagtgcttgtgaagattgtgaaaaacaagcatgccccaccgttcaagacagcacagtttgagctggaatttggtaaagggatatgccgcagttcagagcttattgaacttggattaaagcacaagcttgtcaaaaagttgggtggtgcattttattctttcaacgaagagtcatatcgtggtaaagatgcccttaaatcttacctcaacgaaaatgaaagtatcgcaaaagaactggagacgaatttaaggaaattgatggaaactcaagcacctaaaaagcaggaggatgaaggtgatttcctgagtgatctgcctgaagagagtctcgccactgaaacatcctccgaggaggaactggcagctgtaatagaagcttaa</cdnaseq>

Protein Sequence

<aaseq>MANLLRRASLRRAVAAVAAAAAPCPESYKQGICGSTFHCRYFSS KAKKKTKSSGTDSGEENLSKKDLALHQAIDQITSAFGKGAIMWLGRSEGRREVPVVST GSFSLDLALGTGGLPKGRVIEVYGPEASGKTTLALHVIAEAQKHGGYCAFVDAEHALD PALAESIGVNTSNLLLSQPDCGEQALSLVDTLIRSGSVDVVVVDSVAALVPKSELDGE MGDAHVALQARLMSQALRKLSHSLSLSQTILLFINQIRSKVTTFGGFGGPMEVTSGGN ALKFYASVRMNIKRIGLVKKGEETIGSQVLVKIVKNKHAPPFKTAQFELEFGKGICRS SELIELGLKHKLVKKLGGAFYSFNEESYRGKDALKSYLNENESIAKELETNLRKLMET QAPKKQEDEGDFLSDLPEESLATETSSEEELAAVIEA</aaseq>

Gene Sequence

<dnaseqindica>4336..4728#3893..4027#3287..3433#2900..3072#1915..2002#1478..1695#1178..1235#104..181#gggggcaaaaaccctaaaccctagcaatccccaccctcttcctcgccgcacggttccaggggtcgccgctgccgtcgccgccgccgccgccgacgacgacgacatggcgaacctcctgaggcgcgcgtcgctgcggcgcgccgtcgccgccgtcgcggcagcagccgcgccctgccccgaggtcgaaactcccctcctctctccccgccgtatttgactgtgttttttttgccccccttggtggccatggagtgttcctactggcagcttgtgccatatgtgattgcgatttggcatccttgctggggtttgatcgcttgcgtttggtgaaccgcgcggcttatatgccctcggcgatttgctctgtgccaccgaatgacccccattttgatcactgagggtacccctccccttattttgtactacaaacctagaatccgggattttggagaaatgcctattaaggctatgtgcaatctgtgtgcttggacagatgcttaggggagtaaactgtgtctatttttgccacgctggtgctgcgtgaggtgcttgccgccaagtgaaacagtcgatgcttgcgagcgcctgcatgaaaaatggagtggagaagcacctgaaataactaaagcgtccgtaaaataggtgttctctattggacatcaaggctcttgaacagatgctaagggatttttttcctaagcatctgtactatttgtacatgccctttaatgcgccataaatatattttttgcttacaatagattaacctgcaacaccaaaggtgatttaggttattagattagtgtagcctccaggggttttcttgaggttgcaacacatctccgtgtcatctttatcctgacctcacgatttgtttgcaccttcagacttgtaggtatttgtatgcacttaagacaaatactggatcatttgtgacacacacagtatgcacaatgaaattgatgagaatggaagagattcactcatagtgtgcacttcaaaacaaatactgaaatcatttgtgatacgcacagtatgcataatgaaattaatgcggctggaagatatgtattcataattagctttaaatgatgccggttgagaatgaaacaatgctgtttaatctttcacataaaaaccttgatatggttttgctaatgcatcaatctttgtgcagagctataagcaagggatctgtggctctactttccactgccggtatttctcgtctaaaggtagtagacacttattccttttatgatttattatgtgcataccttaccttagatatactaaatactgcatcccatggctcagttgctatcatcttaaatcttgatattacctgtattgacacataagttacattgtgaatttgtgatgaaattgaactgcatgattttttttcttttgatttatgttttattgctgccatctactgaatcttatatttattctttttgaatcatctacttagccaaaaagaagacaaagtccagtggaactgactctggtgaagagaatctgtcaaagaaagacttggctctacaccaggctattgatcaaataacatctgcatttgggaagggcgcaataatgtggcttggtcgttctgaaggtcgtagagaagtacctgttgtgtcaactgggtctttctctttggatttggcattgggaactggtggacttccaaaggtaaggattcctatgtagttacaaaatatcttgtaagtagaatctcacttgtatcaatgtttaatttgtattgcatgatattctttgcaaatctaagttctgctgagtgttaactaccctaaaaattagtcttctctcatcatatgaagtgtgcaaatgttctttcatggacaaaacatactttgttttgtatgaatgtcatgctattgttctctgtagggtcgtgttatagaggtgtatggtccagaagcttcaggcaagacaactcttgcacttcacgttattgcagaagcacaaaagcatggcggtaatatcagcacttcgaacctaatctatatattttagcaatagcatatattttacatgagaaaaggtacagattattctgtgttctcctttaatccaaagatttaggctaacaacatctaatacgtataaaaattattaccatgtgcttaatgctgtgaacttgtgatggtatagtcagtcagatgctttttatgtagtatgcataagggttttgctggcttacaactgcttgacagtgaaagtgatcttgctaattatgatgtgaacatagttcttaaacttgtctgttcaaaatattgtaccattgagtattttgttgacatcatcagcaggggaggcccccacggtgcgctatgtattttaccaagcagcttggtatctgtgtaatagccaatagcattatagtgtctttatatttggagtttggagaatggaatatgacgaaaccagttttagtgttttagaacatggaatatgctgacattgtgtagcccaatattagctcaaagcccagcaaccatgggataagctacatatgcaaagtacctgtcgtgggcttttgtcctcgttcgctcagaggggttagggaatgctatgttttgagctcacagaggttatatagtttaattcagtgtaaacatttaaatatgaaggtgttatttgctccttcatacttctagattactagcttcaccaaataatgttggtcttcaaacacgcacagaacctactcgggaaaatctgcctgtaatgcaatttaatggagcatttcaaaaaaccatgaaccatttggtctggaaatcatgagcactgacaactgcaagttcatctaaaatagaatttggacgaacctaatatatacctcaccgagtttttgtttttgctatttttctaggttattgtgccttcgtagatgcagagcatgccttagatccagctctggctgaatcaattggggtcaacaccagtaatttacttctctctcagccagactgtggcgagcaggcactcagtcttgtggacacactgattcgaagcggctctgttgatgttgttgttgttgatagtgtaagaacctgaccatctatccccctcccatttttatttttcttttcggagcattgccttctttcaaattgataatagtgcactttctgcttaaaattttaataacaatgtccaattagcagttggaacatgcttatcgacactcaacgttaataaatacaacttcatttatatgagaagtttgctaagcagtgcatcttattttgtgacataggtagcagctcttgtccctaagagtgagcttgacggggagatgggtgatgcacatgttgctctccaggctagattgatgagccaagctcttcgcaagctgagccactctctctcactttcccagacaattttgttattcattaaccaggtattaaacatgtgcactgggcactgctcttagtgtttgttgaatttgcttttttcaatttatatatcccatgtttttgtttggtgaagcgaaggaacaaatttaactagtcttaaggctgttaattccatgatgattagcttattagctgaaaagctccaaaatacgtgacactacagctaaataaggatggtattttcagaaacattattgtacaattcagacatttgtttacagtgatgcaactgattctacttgaatcttgttcgtcgatcatgagttctcacagagtgatcatttgaacactcgttcaatacattctgtcccatcattactatagacttatattcaacctgtcccagaaaaaaattaaatactttgtaccccactaatcaatgcagtctattcgcttcatttctctcagttttatattatttgcatcctttgtatgtgttatagatcaggtctaaagtgaccacatttggaggatttggaggtccaatggaggttacttctggtggaaatgcccttaaattctatgcttccgttagaatgaacatcaagcgtattggtttggtaaagaaaggcgaagaggtaattaaccaagtcatatccttgacatttaccttatttagacagttagtcaatacttgacatatatgcactgctatgcccatatcaaggtttctttggaacctagtttttcactcctgcgtcatatctatttggatagcatctccaaaacactgttagacacgtggcacatgcatgctttgtatttagccatatgattttataacctcatcaatcaaaattacagacctagtaaccttacagatttagcttcaacatattgtagtgcttcttgaaatgttactgacaatttttacttctgtttgcagactataggtagtcaagtgcttgtgaagattgtgaaaaacaagcatgccccaccgttcaagacagcacagtttgagctggaatttggtaaagggatatgccgcagttcagagcttattgaacttggattaaagcacaagcttgtcaaaaagttgggtggtgcattttattctttcaacgaagagtcatatcgtggtaaagatgcccttaaatcttacctcaacgaaaatgaaagtatcgcaaaagaactggagacgaatttaaggaaattgatggaaactcaagcacctaaaaagcaggaggatgaaggtgatttcctgagtgatctgcctgaagagagtctcgccactgaaacatcctccgaggaggaactggcagctgtaatagaagcttaatcagtgatgcttaatcagtgatgatagatcaacaagaaggaatatgcgctgagcagttattccactgaaccatacatattttggttcttggagatgtcattttggctgcaccgggcatatagaatgtgtggaattcgtatttgaacatccttcagttgtcaaatgcctggagcgaagtgaggtagagccggggaaggaccggggggcttacgtatggacttgtatggtggctatttagacattgaaagggttattagtagaatgtaaccatgtatatatgtcgcatatctgggattcctcgtcggttctggcttgagatacacttactaaatgcttctgatatttgattattccggttccattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0901200, RefSeq:Os01g0901200