Os01g0901500

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Revision as of 05:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0901500| Description = AMP-dependent synthetase and ligase domain containing protein| Version = NM_001051646.2 GI:297598128 GeneID:4325044| ...")
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Gene Name

Os01g0901500

Description

AMP-dependent synthetase and ligase domain containing protein

Version

NM_001051646.2 GI:297598128 GeneID:4325044

Length

3771 bp

Definition

Oryza sativa Japonica Group Os01g0901500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41008830..41012600

Sequence Coding Region

41010031..41010249

Expression

GEO Profiles:Os01g0901500

Genome Context

<gbrowseImage1> name=NC_008394:41008830..41012600 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41008830..41012600 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caatgttctgtacgattgcagggctacggtttaaccgaatcgtctggcgcggtggctgccacagtcgggccagaggaatcgaaggcatacggatcggtcgggaagctggggtcgcatttgcaggctaagattgtagatccctccaccggtgaggccctcggaccagggcagcgcggcgagctttgggtcagaggcccaatcgtcatgaaaggcaagtag</cdnaseq>

Protein Sequence

<aaseq>QCSVRLQGYGLTESSGAVAATVGPEESKAYGSVGKLGSHLQAKI VDPSTGEALGPGQRGELWVRGPIVMKGK</aaseq>

Gene Sequence

<dnaseqindica>1202..1420#gaacggaatccgaatccccaatggccgaccgcgcgccgcctccgcctccgccgcccgccgggatcgactccaggagcggcttctgcgcggcgacgcggatcttccacagcacccgcgccccgggcgacctcccgccggagtcgctcccgatgaccgcggcggcctacgccttctccctcctgtcgtcgtcgacgctccccggccgccccgcgctcgtcgacgccgccactggcattgccatctcctacccgtccttcctcgccgccgtccgctccctcgcgggggggctctggtgctccctcggcctccgccccggggacgtcgcgctggttgtcgcgccctcgaggttggaggtccccgtgctcgacttcgcgctcatgtccatcggcgccgtcgtgtcgccggcgaacccggtgtccacgcccgaggagtacgcgcaccaggtcgcgctgtccaggccggtcgtcgcgttcgcggcgcccgaggtggccgccaagctgcccgagcatgtgaggtgcgtcgttatcgggtcggatgagtacgggaggctggcggcgtccgacggccgccgcgcggcggctccggcggcggtggcggtgaagcaatcggacacggcggcggtgctctactcgtcgggcaccacagggcgggtcaaggccgtcgcgatcacgcaccgcaacctcatcgcgctcatgtcgctgcacgccgacaaccgggagaaggtcgcgagggaggccgccgaggccggcgaggagccgccgccgccggcggtgacgctgctccccatccccctgttccacgtgttcgggttcatgatggtgctccgctccgtctccatgggggagacctccgtgctcatggagcggttcgacttcatcgccgcgctgcgcgccatcgagcgctaccgcgtgacgctgctgcccgcggcgccgcccgtgctcgtcgccatggtcaagtacgaggaggcgcgccgccgcgacctctcctccctgctggtcatcggcatcggcggcgctcccctaggccgcgaggtcgccgagcaattcgcttccgtcttccccaacgtggagcttgttcaggttaagcaaagcatccatccaacaatcccgtgcactctctctgcagcagaataatctactgaatctcatcaaacttacaataatgttccagcagaataatctactgaatctaattaaactaacaatgttctgtacgattgcagggctacggtttaaccgaatcgtctggcgcggtggctgccacagtcgggccagaggaatcgaaggcatacggatcggtcgggaagctggggtcgcatttgcaggctaagattgtagatccctccaccggtgaggccctcggaccagggcagcgcggcgagctttgggtcagaggcccaatcgtcatgaaaggcaagtagtgactatgcattttttgtttacttgtttagataataatacagccaggaaatttcaacattacatccaacaatgacgattcatggcctgaaactttccatacataatattatgttatcgtttgattctttctgaaaggtgcatacagtcaattatttgtctgaaaggtacatacagtcaattatttgtcatatataggtcttgtaagaggtccctcgtatcacgtaaatgttgtggtcaatagttgtttgggtaaagtgtaaatgattagctcgttttgcctgcttgtgctttgtggcacgacaccttcttctttaggctgtgtttagttcacgccaaaattggaagtttggttgaaattggaacgatgtgacggaaaagttggaagtttgtgtgtgtaggaaagttttgatgtgatggaaaagttgaaagttcaaagaaaaagtttggaactaaacaagggcttagttatcggtgtagtttcagaaaatgagagtttgtcagaccaaatagtgatggaccatgtggtagtaatagcatttgcaacagataattggacacttgttcagctacttgacggctagccagcatgccagtaggagtaggtatgctctcaagttgtttatttgtatggaggcatcacttactggtcctacatggattttgatatctgatatattactaaacgtcatccatgctttatcagagagactagaaagttagtgctggtctagacatcaagtttgttttcgactatccaattgaacttctggaattgtagtgttattagtttaaaaagcgcttaaggatatagaaatctgaaataattaaagccaatatttagcttgttgatggatttgaccttttggtagtaggccttcccagtgcagcatatacaaggacatctagcatatctgtgctttgccttaatacttgagccttttcttgattgtatcatttttggggatgctttttcaggttacgtgggtgatgatgaggcgaccgcagcaacggttgactcagaaggctggttgaaaacaggtgacctctgctacttcaatgaagatggttttctatacatcgttgatcgactgaaggagttgataaagtacaagggataccaggtaactgcctgccatagctgcacagctggttcaaaactacattcacgccagccacctgggtaagttgtcacaagtttctgtttgcatgatgttggcctttaaattttttctcaggtacctccagcagaactggagcatattctgcagtcccatcctggaatcgctgatgcggcagttatcccgttagtatcttaagaaaaaaaattgcagatagcttgtaagcttccttcgtcattcaacatttgatgtttcttctgtgtgtaccattcagatatccagatgaagaagctggggaactaccaatggctttcatagtaaggcaaccaggttcaaatattaccaaggaacaagtcatggattatgtcgcaaaacaggtatggtctctctttttagtgatctgaatgttgcattctacgtacctgataaatttgcatatcttttaaggtgcctgtcataatcatctttgttttttttttattttgctttttgagagcaattttttttctagtattttagtatcattagtggttaagttccatcttccttgtaaaaagatagtggtttagtgctccactggttgctgccagttagggatttttttttaaaaaaaaacattcttttgctgcgaaaattgcatcacagaaatatcattcgcataacatttggccgacccggcaaaaagaaatattgttcgcagtgataggtatggatggaaatcttagtctgcatatcaaattatatgagcgatcctttcaatatagcataattttcaaggcctttctgtcattttgacaattgcttgcaacttcaaacccttgttctcattcgacaggttgcgccatacaagaaggtgcgacgagtggcttttgtcactgcaataccaaaatcgcctgcagggaagatccttcggcgggagcttgtgcagcaggccctgtcgatgggtgcctccaagctttgaaatgtgtaatttgctgcagtagtctagtagagaatattttgcttacatatagtgaactggagatttataggcctcaagctttaccaattaacacctcctttggaggctgagaaattttggggggaattttggaggactacgaaaattatgtaaattcccatgttccagagctagtatattttagctcaacaacacggcctccaaatgtccaatcatatttccatgtctacaccgtatattttctgcatggatttacatatggcagttttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0901500, RefSeq:Os01g0901500