Os01g0902800

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Revision as of 05:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0902800| Description = Similar to Peptide transporter| Version = NM_001051654.1 GI:115441678 GeneID:4325015| Length = 3196 bp| Definition ...")
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Gene Name

Os01g0902800

Description

Similar to Peptide transporter

Version

NM_001051654.1 GI:115441678 GeneID:4325015

Length

3196 bp

Definition

Oryza sativa Japonica Group Os01g0902800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41068343..41071538

Sequence Coding Region

41068343..41068439,41068557..41068774,41068870..41069377,41069682..41069697,41070764..41071538

Expression

GEO Profiles:Os01g0902800

Genome Context

<gbrowseImage1> name=NC_008394:41068343..41071538 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41068343..41071538 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagggcgtggaatcgaatgaccggcacggcggcgccgccgccgaccgccggaagtcaaatcgccggaatcggtgggcctgcaccttcatcctcgcgaacaatttcttccaaaacatggcctacttcggcgtgtcgacgaacctggtgaactacctcaagtacaggctgcacgagggcagcaagtcggcggcgaacaacgtcaccaactgggagggcaccggctccattgcgccgctcgtcgccggctacctcgccgacgccttcctcggccgatactggaccatcgtgctctccatggtcatctccgccgtgggctatggcgtgctggcggcgagcgcgtcggtgatcaggctggagagcgcggcgctgtacgccgggatgtacctggtggcgctcggcggcgtgctggagccgatcatggcgccgttcggcgccgaccagttcgacgacggcgaggacgatcagcgcggccggcggcagagctccttcttcaactggttctacctctcgctcaactgcggctcgctcgtcggcggcaccgtgctggtgtgggtgcagaccagcgtcgggtggggggtcgggtacggcgtcccggcgatcttcagcgcgctgtccgtcgccgtgttcctcgccggcaccgccacgtaccggcgggaccagccgccggggggcagcccgctgacgaggatcgcgcaggtggtggtcgccgcggtcaggaagttcgacgtggagataccgtcggactcgtccatgctgtacgagagcgacgccgtcgatggcatgccggcgatacatggccgccgccgactcctccacaccgggatcgaacgaacaaggttcttggacagagctacggtgaagactgccggcgagaaggcggcgcagagcccgtggcgactgtgcacggtgacacaggtggaagagctcaagtgcgtgctccggctgctgccggtgtgggcgaccggcatcatctacgcggcggcgtacacccaggtgaccaccaccttcatcctccagggcgacacgctggaccgcagcctcggccgcttcaaggtacccgccgccgcgctctccatcttccacaccctcagcgtcattctctgggtggcgctctacgaccgcgccatcgtgccgctggcgcgccgcgtgacgcgccacgacggcgggttcacgcagctggcgcggatgggcgtcggcctcgtcatcctcaccgtcgccatggccgccgccggcgcgctcgaggcggcgcgccgccggctgatcgcgcggccgtcggtgttctggcaggtgccgcagtacgcggtggtgggcgcgtcggaggtgttcacgctgatcgggcagatggagttcttctacgaccaggcccccgacgccatgcgcagcctctgctcggcgctctccagcacgtcgttcgcgctcggcgactacgccagctcggcgctcgtcgtcgtggcggcgcgcaggggcggcgcgcccgggtggatccccgacgacatcaaccgcggccacctcgactacttcttctggctgctcaccgcgctctgcgtcgccaacttcgccgcctacctcctcatcgcacgctggtacacgtataagaagaccgtagactag</cdnaseq>

Protein Sequence

<aaseq>MEGVESNDRHGGAAADRRKSNRRNRWACTFILANNFFQNMAYFG VSTNLVNYLKYRLHEGSKSAANNVTNWEGTGSIAPLVAGYLADAFLGRYWTIVLSMVI SAVGYGVLAASASVIRLESAALYAGMYLVALGGVLEPIMAPFGADQFDDGEDDQRGRR QSSFFNWFYLSLNCGSLVGGTVLVWVQTSVGWGVGYGVPAIFSALSVAVFLAGTATYR RDQPPGGSPLTRIAQVVVAAVRKFDVEIPSDSSMLYESDAVDGMPAIHGRRRLLHTGI ERTRFLDRATVKTAGEKAAQSPWRLCTVTQVEELKCVLRLLPVWATGIIYAAAYTQVT TTFILQGDTLDRSLGRFKVPAAALSIFHTLSVILWVALYDRAIVPLARRVTRHDGGFT QLARMGVGLVILTVAMAAAGALEAARRRLIARPSVFWQVPQYAVVGASEVFTLIGQME FFYDQAPDAMRSLCSALSSTSFALGDYASSALVVVAARRGGAPGWIPDDINRGHLDYF FWLLTALCVANFAAYLLIARWYTYKKTVD</aaseq>

Gene Sequence

<dnaseqindica>1..97#215..432#528..1035#1340..1355#2422..3196#atggagggcgtggaatcgaatgaccggcacggcggcgccgccgccgaccgccggaagtcaaatcgccggaatcggtgggcctgcaccttcatcctcggtaaagtaaaacacgctcgtaaattcagacattttggtagtatatcccagtacgtgtaacgtgttgcatacttgcatatcgatcttctgtgctttggtgcatgcgttggtcgatcagcgaacaatttcttccaaaacatggcctacttcggcgtgtcgacgaacctggtgaactacctcaagtacaggctgcacgagggcagcaagtcggcggcgaacaacgtcaccaactgggagggcaccggctccattgcgccgctcgtcgccggctacctcgccgacgccttcctcggccgatactggaccatcgtgctctccatggtcatctccgccgtggtacgttcgtcgccgccgccggcgtacgtcgtggatgtgtgcagagagctctagctcacgctttatacatcgcgtgttctttttcgagcatgcagggctatggcgtgctggcggcgagcgcgtcggtgatcaggctggagagcgcggcgctgtacgccgggatgtacctggtggcgctcggcggcgtgctggagccgatcatggcgccgttcggcgccgaccagttcgacgacggcgaggacgatcagcgcggccggcggcagagctccttcttcaactggttctacctctcgctcaactgcggctcgctcgtcggcggcaccgtgctggtgtgggtgcagaccagcgtcgggtggggggtcgggtacggcgtcccggcgatcttcagcgcgctgtccgtcgccgtgttcctcgccggcaccgccacgtaccggcgggaccagccgccggggggcagcccgctgacgaggatcgcgcaggtggtggtcgccgcggtcaggaagttcgacgtggagataccgtcggactcgtccatgctgtacgagagcgacgccgtcgatggcatgccggcgatacatggccgccgccgactcctccacaccggtcagtttaggtgagcaagcgtatgcatttccagttagtgcaattgcctttgtcgtttctctttgaattggaggaaaaaatgatttgagattgctaaaaatcatgtggattgattaaccccaaatattagtaccatcaaattcttgtgttaatagtactaatcgtccagtctagtctataaggagatggattttccgcctcaggccttttccttttaatcccacccacaagagaatttgaagaagaataatttcatacctattatgagatgtggaattaattcctctcaatcttattcttgtagggatcgaacgaacaaggtctcaagcgggcatcctctcctttctcgtatgtcactcaaatgtttctttaaaatgaatatgataatataaattaatatgtgaaatatcactccataaacacataatatgccatatttctttttctttttagaaacatagtacaaacgtatgcgctcacaacgcgcgcatactcacccctataaatgcatacatgcacatcctatttctagctatgagcatctttaaaagactgagtcaacatattttgatactaacgaattcactgcgaatgtcttggtatcaaggggtacgtcatgtaccactgaaaaaaataattagccgcaaatgcgagcactcacgccaagtctaaacttgaatctggatgatcggattgcaccacaaagaaaccaacaagttaagttacactcactccgcatcaaatttatttgtaactcaaggtaattcaacttcgacaaaagtataataaatgcaagttttttaaaagtctttctttatgtacaagccatcgcattaatactaagagatataaaaaccatgattgccacaaaaataaacaaagaaagttcaaagtttgagatgttactaataaatattcttttagtggaacatttgcaagtaaacgtcaaatatttattatcaaagggaggtaaacaaaaaagtttactttagtggaacatatattagctctatgcactgcacataaaaattcagctagtttagaataatatatatcaacttttaattgccgaccctttctttgagatgacatgtcatattgtcatggcgcaactaaggctctgtttggagagcttctaactgctgcagctttttctagaattaaaaactcccttaaaaagtttagcgttggtcataattttgaaaagttgtagttgtaaaatctagaaaataaactagaagtcaaaagctggaaaaccgagcttttctaaattcttagaaactggttaccgactaactattttttagaattttaagctcactaatcaggccctaaatcacctattcaaatcgtttgcctcatgaactcggctgcttgttgatctaggttcttggacagagctacggtgaagactgccggcgagaaggcggcgcagagcccgtggcgactgtgcacggtgacacaggtggaagagctcaagtgcgtgctccggctgctgccggtgtgggcgaccggcatcatctacgcggcggcgtacacccaggtgaccaccaccttcatcctccagggcgacacgctggaccgcagcctcggccgcttcaaggtacccgccgccgcgctctccatcttccacaccctcagcgtcattctctgggtggcgctctacgaccgcgccatcgtgccgctggcgcgccgcgtgacgcgccacgacggcgggttcacgcagctggcgcggatgggcgtcggcctcgtcatcctcaccgtcgccatggccgccgccggcgcgctcgaggcggcgcgccgccggctgatcgcgcggccgtcggtgttctggcaggtgccgcagtacgcggtggtgggcgcgtcggaggtgttcacgctgatcgggcagatggagttcttctacgaccaggcccccgacgccatgcgcagcctctgctcggcgctctccagcacgtcgttcgcgctcggcgactacgccagctcggcgctcgtcgtcgtggcggcgcgcaggggcggcgcgcccgggtggatccccgacgacatcaaccgcggccacctcgactacttcttctggctgctcaccgcgctctgcgtcgccaacttcgccgcctacctcctcatcgcacgctggtacacgtataagaagaccgtagactag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0902800, RefSeq:Os01g0902800