Os01g0904200

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Revision as of 05:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0904200| Description = Protein kinase-like domain containing protein| Version = NM_001051656.1 GI:115441682 GeneID:4325018| Length = 5342 b...")
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Gene Name

Os01g0904200

Description

Protein kinase-like domain containing protein

Version

NM_001051656.1 GI:115441682 GeneID:4325018

Length

5342 bp

Definition

Oryza sativa Japonica Group Os01g0904200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41113377..41118718

Sequence Coding Region

41113544..41113620,41113749..41113893,41114097..41114250,41114876..41114993,41115072..41115181
,41115638..41115748,41116554..41116681,41117234..41117362,41117456..41117503
,41117672..41117866,41118128..41118256,41118382..41118501

Expression

GEO Profiles:Os01g0904200

Genome Context

<gbrowseImage1> name=NC_008394:41113377..41118718 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41113377..41118718 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgctggcgctggcgcagctgcaggacatcggggaccgcatcaccgaccgcctccgcccgtggagccgctccgcggagttctgggtccgcgctgccgacatctacaccagctacaaggtgtgccagctgcgcgcggggttcgtcaaggatgaggaggagcgggaggccatgtgggagcagcagcacgagcttggtgcccagaagatgtactccctctgctccgagctcggcggcctcttcctcaaggctgcacaaattctgggaaagcccgatttggcgccaatggcttgggtgaaaaggcttgtaaccttgtgtgacaatgctccagccacgcccattgatgtagttagagatgttgtggagaaacagtttggcaagagctttgatgacatatttgaatgctttgatgttgagcctgttgggtctgcttccattgcacaggtgcaccgagcaaggcttaaactatcaaaaacagatgttgctgtcaaggttcaacatccaggagctgaaaaactgatgatggttgacatccggaacatgcaagcatttgcattgttcttgcagaagtatgatatcaattttgacctgtactctgcgacaaaggagatggaaaagcagatatgctatgagtttgactttgtgcgcgaagcaaaggcgatggaaagaatacgagaattcttacgcgtgaccaacaagaaaaagcctccagttatagtgcctcgtgtgattcctgaaatggttagcagggaggttttggtaatggagttcattgaagggacaccaataatgaatcttggcaatgaaatggctaaaaggggcattgatcctggtggtaagattgcaacaatggcaaagcagaaaattttaacagatcttacacttgcctatggtcaaatgattttgaaggatggttttttccatgcagatccacacccaggaaacatccttatctgcaagaacacagaggtagctttgcttgattatggacaagtgaaagcaatgccagaggatttacgacttgcttatgcaaatcttgtaattgcaatggctgatgatgattttttgaggactaaagaaagtttcagggagattggtattgaaacatggagtatagctgataatgagctagaagaattatttcaattatcccttagaatgtttgatactagattaccaccaggagtaactgctatgtcacccttcgccgaggattcttcactaaataaagttggagtgcagagcttccctgaagagctattttcagtgcttcgaactatacaacttttacgtgggttgactgttgggatgggcctcagattctcatgtgctcagcaatggaagcctattgccgaggaagctttgttgaagtctgggagactaaaagctgcaagatcaagaaggccgcggagaagttttgtcaggagactgttttcgagtgacaacgagaaccaaggaacatga</cdnaseq>

Protein Sequence

<aaseq>MPLALAQLQDIGDRITDRLRPWSRSAEFWVRAADIYTSYKVCQL RAGFVKDEEEREAMWEQQHELGAQKMYSLCSELGGLFLKAAQILGKPDLAPMAWVKRL VTLCDNAPATPIDVVRDVVEKQFGKSFDDIFECFDVEPVGSASIAQVHRARLKLSKTD VAVKVQHPGAEKLMMVDIRNMQAFALFLQKYDINFDLYSATKEMEKQICYEFDFVREA KAMERIREFLRVTNKKKPPVIVPRVIPEMVSREVLVMEFIEGTPIMNLGNEMAKRGID PGGKIATMAKQKILTDLTLAYGQMILKDGFFHADPHPGNILICKNTEVALLDYGQVKA MPEDLRLAYANLVIAMADDDFLRTKESFREIGIETWSIADNELEELFQLSLRMFDTRL PPGVTAMSPFAEDSSLNKVGVQSFPEELFSVLRTIQLLRGLTVGMGLRFSCAQQWKPI AEEALLKSGRLKAARSRRPRRSFVRRLFSSDNENQGT</aaseq>

Gene Sequence

<dnaseqindica>5099..5175#4826..4970#4469..4622#3726..3843#3538..3647#2971..3081#2038..2165#1357..1485#1216..1263#853..1047#463..591#218..337#gtagccacgcacgcgaggccgcccgcgagccacatatcgcgtcgcgccgcgccgtgcacatcccccccaaccccaccccaatcaggcacaatcacggcgcgccgtggccgaggcatcatccaatcaaggcgaggccacctcgacctcgtcctcgtgccgtccgcccccttcggcgagcgcgagcgcgcgcgcgagggtgagagggagggagggagcaatgccgctggcgctggcgcagctgcaggacatcggggaccgcatcaccgaccgcctccgcccgtggagccgctccgcggagttctgggtccgcgctgccgacatctacaccagctacaaggtggcgccgcctgatcctgttccattgctccattggttggtgcgccaggcgcgcgcgcgcgcgcgcgggaggtgtttgatgatatggctctgaggttttgatggggtttcgtgtgatcggtttaggtgtgccagctgcgcgcggggttcgtcaaggatgaggaggagcgggaggccatgtgggagcagcagcacgagcttggtgcccagaagatgtactccctctgctccgagctcggcggcctcttcctcaaggtacttcctgcttctttttttctcccatggattgttgagctgctggttgtatatagtcttcgagggttgggactgaaacctagatgatttattagaagggaatatttgacaattcttgttgcgatgggcaggaggtaaaattgacttatactgtagctgtagttgcacccctggtgccttattcattcatgaatcatgatcgagatgtactgtctttacttccttgatgtttgaatggtctgtgatactggattttgacaggctgcacaaattctgggaaagcccgatttggcgccaatggcttgggtgaaaaggcttgtaaccttgtgtgacaatgctccagccacgcccattgatgtagttagagatgttgtggagaaacagtttggcaagagctttgatgacatatttgaatgctttgatgttgagcctgttgggtctgcttccattgcacaggttcgtcaggtcttctcatcacctgtatgatctggtgaaactgtataacactgcttctttgcacgatctatgtctatgcatatgcagtttggctctttgtgccataatactttatctgtaaaggtcattcgtgcatgtacttattaagtattgtttcaaatctgctaggtgcaccgagcaaggcttaaactatcaaaaacagatgttgctgtcaaggttaggatttcaatttcttgtttcataattctttcttgttgtctcttatgttttatgtgacctatttgtctttggcaatctggaactctccaggttcaacatccaggagctgaaaaactgatgatggttgacatccggaacatgcaagcatttgcattgttcttgcagaagtatgatatcaattttgacctgtactctgcgacaaaggagatggaaaagcaggtttttattcagttcaataccagtgtcttcttttgttgcttatcccattgcacttgcttaaacctgttcgaaaaccttgataaatttcagacctcttacggtattattttcttgacttgtacaaatcagaactctatcagattttttgtttttaatcttctgtgcctttctggtgaaatggaagatgtaacaaaccgaaccactcaggccatttgaaatgaaagaatgagtaacaatacatgatatgaaataaacccaatcattcagctgttataaacaagaaaggacaaaatatttgcagggacaatgttataatcaattatttaggagatcaaatgtttgtatggactgtttaagataaaatttaatgttgtatgtgagaatatgccacatgagttccagtttagttctgaagcaaatgtcaccataaatcatagacggtactgagaactaaaaattgtaaacttgtctttatacaaatatgaatgagatcaaaactgttgatattaaatccatgtttttattttgcatgaacacatcatttcatccaagatatgctatgagtttgactttgtgcgcgaagcaaaggcgatggaaagaatacgagaattcttacgcgtgaccaacaagaaaaagcctccagttatagtgcctcgtgtgattcctgaaatggttagcaggtattgtgccatgtctattctatgaacagcattcattattttgttaaaatatacctctataccaatttactggtcaatacataggctgccatcaatcagaagaactcaattcaacagagcatttataaattgtccatttgctaattgcttgagactttattcgaattagcatgtttcttttccttcaagaggggttttcgtccaatgagataattcttatctgcaggttccagtgccttttcattgcacaaggggggcgatgtaggagtaattgccttacacgctattcccattggaacacacacatttagcatatactttgtagttggcctgcctgccccagtctatgtatttgcccacagtggagtggcattcttgtgttttggcctaagtcaccgggaacatggaacaatctcgtctctcgcgtgttaaaacctcaaataagtagcgtcacgctttccttgatcccgtttctcgacccatcgatccgggaacttttgtgacataggttttggctggttaagaatttcaaatttgacaaacagatgactatccatcatgtgcattcctgattttgtattattcctcgtattgcaaatgtaggaaatgctgtgatgtgtataaatttatccacttgttgataaaaataagaagagtctttactgagatgcaatgatgctgatttgatgatttcaattcgttgagcccatcccctcatctatttcttttcaaaaccatcatgcagggttgtgctattttcgtatgaataaaacagtattttttttttgtttctttgctttgttagggaggttttggtaatggagttcattgaagggacaccaataatgaatcttggcaatgaaatggctaaaaggggcattgatcctggtggtaagattgcaacaatggcaaagcagtaagccccttcatctcgaaagagtatggccctcatttgcttggtttatgaaaccttacattagttttgctttctggagtatctttttgatgttttaacgatgttggaactgttacagtaaaatatcatgctgtctagaatagatctagggatgatgagtaggtcgtattagtatttagtgattccattcatttccacaccacttcagatgtttgagttggtgtggtgatattttgttctacacaatagcccttgtccaacctcttgtcacataagaagttccacaacaacatttgaactatttttcctctactgggatagttggtcccaaccaacttaatggacatatgagcacaagtttctctaaaagaaaccttttggtttatcagatgttctgattgtttctactttccagtgctcaggccatctcagaaaatattgtttttcttaatgcaggaaaattttaacagatcttacacttgcctatggtcaaatgattttgaaggatggttttttccatgcagatccacacccaggaaacatccttatctgcaagaacacagaggcaagacttctctttctcttcctttttttggcaatggtattttcttgttgaatatagttttgtggtggcctctgttaggtagctttgcttgattatggacaagtgaaagcaatgccagaggatttacgacttgcttatgcaaatcttgtaattgcaatggctgatgatgattttttgaggactaaagaaagtttcaggtacaactaatcgcttgccttgttaagtgtcatttggccaattttatgcaaatttctttaaacagtcaagagttatatctatactgtttcaagaagccaatggtggtggtggcagtgaatttgccactccacctctacactacattatttaccaagtccttcttgtagtccttcaatattgcatattagtcccttcatttgccattattttcttatgtggtctctaaagtacaaattaaaatctagaaaggtctaatatgactgagtgccacatatatttgtggtattaaagctaatttaactcgcatatatttgtggcatgaaagctaattttacttattagtgctccttatgagttatgacaaaaatatggatggtaatcttcgattaaaaaaaatcacactcatttaatttgttgtgaacagtagtactaggacatgtatgattcttttctgaccgtagtgaatgcactggtgtgcaggtagtgaagtaataaataaaaatatgttaacatattacattcataggtagcatagagcttaatgacatgatggaaaattcgttcctgtggaatttttattggtctccattgcttattcttcttatggcatttgaaatattccagggagattggtattgaaacatggagtatagctgataatgagctagaagaattatttcaattatcccttagaatgtttgatactagattaccaccaggagtaactgctatgtcacccttcgccgaggattcttcactaaataaagttggagtgcaggtatgggattataatctagtaacatacattttttatgtctgaaacatgttttctatttaacaaagcttcaaaatttagagaacatattttcttccatttacttgcaacctcttatggagatggatggtttatatttgttggtactatttgacttccagaattgcttactaaatggtgtctctattctattcttttatttgaagagcttccctgaagagctattttcagtgcttcgaactatacaacttttacgtgggttgactgttgggatgggcctcagattctcatgtgctcagcaatggaagcctattgccgaggaagctttgttgaagtctgggagactaaaaggtaactttacttccagttgtttaatcagtctatatcacatttggcgtcacattatcctatataaatagctaaatgccgtactttcttgtacttttagattactaactgagctttgttaatcgcttcagctgcaagatcaagaaggccgcggagaagttttgtcaggagactgttttcgagtgacaacgagaaccaaggaacatgatattacaattgtttcatataacaaatatcatgtattttgaagtgacattaataacaggctcaagcccaattttttatgatgcatatatgcatataagactacacatatttcctttgtgccatatggttttgacacgataatacttttatattttggaaggtagactc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0904200, RefSeq:Os01g0904200