Os01g0906200

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Revision as of 05:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0906200| Description = Conserved hypothetical protein| Version = NM_001051667.1 GI:115441704 GeneID:4324975| Length = 5030 bp| Definition ...")
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Gene Name

Os01g0906200

Description

Conserved hypothetical protein

Version

NM_001051667.1 GI:115441704 GeneID:4324975

Length

5030 bp

Definition

Oryza sativa Japonica Group Os01g0906200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41205543..41210572

Sequence Coding Region

41205764..41206093,41206203..41206298,41206422..41206490,41206969..41207031,41207109..41207186
,41207313..41207406,41208030..41208163,41208315..41208392,41209327..41209392
,41209484..41209591,41209943..41210020,41210539..41210544

Expression

GEO Profiles:Os01g0906200

Genome Context

<gbrowseImage1> name=NC_008394:41205543..41210572 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41205543..41210572 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggtgttcttgataataaggagaagcttaaataggtgcagtgcattaacaaagaacgagacattatttaacttgttccaggtatttcaaagagtacttaaagcctatgcatcgaagttatatgccagattaccaaaaggtggaactgggattgttgcagctgctactggtactgatgggcagatcaggacctccgacagggatgagaaaatgatatgctatattgttaacactgcagaatattgtcaccagacatctggtgagctagctgagaatgttgctaagatgattaacccccactttgctgacaaagtggacatctctgaagttcaggatgagttctcagctgtgatcatgaaagcgttgatgacacttgtacatggccttgaaaccaaatttgatgctgaaatggttgcaatgactcgcgtgccatggtccacccttgaaagtgttggcgaccaatcagaatacgtaaatggtgtcagctctattctgtccagcagtattcctgtgctcggtaacctgctttcaccaacctacttccagtatttcctggacaaattggcagcctctcttggacctcggttttatctcaatatatacaagtgcaagcatatatcagaaactggtgcacagcagatgcttttggacactcaagctgtaaagactattctgctagacatcccatctcttggaaaacagagtaccgctgcggctagctactccaagtttgtaagccgggaaatgagtaaagctgaagcactcctaaaggttattttgtcaccagttgactctgttgctaacacctaccgcgctctcctaccggaaggaacaccacttgagttccaacggatacttgacctcaagggattgaagaaagcagaccagcaaaccatactggaggacttcaacaagcatagccccgctatcaaacaccctgccgttgctccaacagttgcaccaccagttgccacttcatccgcccaccacattgcaccggtcaccaccccgaccgtttcgaccacaccaagcatggctaccttgacaggagctctggccaaccgggaggacgtgctcgcccgcgccgcggcgcttgggcggggcgcggccactacagggttcaagaggttccttgcgttgacagaggcggccaaagatcggaaggacgggccatttcgcaagctgttcaatgcttag</cdnaseq>

Protein Sequence

<aaseq>MQVFLIIRRSLNRCSALTKNETLFNLFQVFQRVLKAYASKLYAR LPKGGTGIVAAATGTDGQIRTSDRDEKMICYIVNTAEYCHQTSGELAENVAKMINPHF ADKVDISEVQDEFSAVIMKALMTLVHGLETKFDAEMVAMTRVPWSTLESVGDQSEYVN GVSSILSSSIPVLGNLLSPTYFQYFLDKLAASLGPRFYLNIYKCKHISETGAQQMLLD TQAVKTILLDIPSLGKQSTAAASYSKFVSREMSKAEALLKVILSPVDSVANTYRALLP EGTPLEFQRILDLKGLKKADQQTILEDFNKHSPAIKHPAVAPTVAPPVATSSAHHIAP VTTPTVSTTPSMATLTGALANREDVLARAAALGRGAATTGFKRFLALTEAAKDRKDGP FRKLFNA</aaseq>

Gene Sequence

<dnaseqindica>4480..4809#4275..4370#4083..4151#3542..3604#3387..3464#3167..3260#2410..2543#2181..2258#1181..1246#982..1089#553..630#29..34#gagtcaaacatatattctgtcaagcagcatgcaggtaaaaggaaattgcatggtggttaacagtcttgtttttagtaggttagcctcggttggctgacagtagtttccaagcttgttcaaaaccttgtgaaaaccataccatttctgttaaaattggtcaaacaatattgaatttcttctttctccattgccccttgggcttgcaaaactcttaaagctagtattaggtttttcaaagttggccctagcaaattttgtgcacacaggcctgtttgttttattgtcacactttgctgaagtcaacttaacttttgtgacatgcagtttttttgcttaccaaaactgtggtatgacaaacctttttaacaacccacttggcatgcacttcctttcttgcccatttctgcttaagctgtgggtggatgattctttttttaccatgataagtgcgccatgccaaagttaaatgtcgctgcgtttggtagccattaaagatttgatgctctgcaatgtgttaatcatgctaatctgctttacaatttgcttatgcaggtgttcttgataataaggagaagcttaaataggtgcagtgcattaacaaagaacgagacattatttaacttgttccaggtaaacaggttttgtaggcagttttcttcgtatggacagttccgtgttgtttgctccaacaaatatttcctattttccttagtgcgtgctgttaaattgggtatctggctgcagctgtatgctgttacaaacattattttacttgggcagaggttctaaatttcataatattagttgatcttactgactattcgagctcaacagttctgacttatgagttttgttggactatttcactagtacatgtttgttatggttatctgtttagaatttataatgtgatcaaaactgatgagtgatgaggtttgaccttcaagaggattttgcctgataaaatatatttcatgttaggtatttcaaagagtacttaaagcctatgcatcgaagttatatgccagattaccaaaaggtggaactgggattgttgcagctgctactggtactgatgggcagatcagggtatgatgatagtcattattcattgtttttttcttatgttttgcttgccttatctggtaatacaaatttaaatcatgtgctggtactgcagacctccgacagggatgagaaaatgatatgctatattgttaacactgcagaatattgtcaccagacagtaagttcattttcccttgcaaataaactatagctggcagcatgattctctttttggacaaatgcattaccttttttttttttgagatggatggacaatacattgctactaaacttgcaaaatgttactgcaaaaaacaaacttgcaaaatggcactgcaaaaaacaaagcaaatatcattgtgctatgctcctgcaaaccttgctttgttcgcagaatgccatattgttaagtgatagtaatatgaatgaatttaataatgccaaactgctcatgcatatggtcagaacttgttgcattttagcctctcatttacgttcttagttcttagtccatagctcttgagaccctgtatcactggatacttcctcaatccctaaccagaggacctcaccccccccccaccccacccccccccccccccaagttgtttcatattggaagactagcatttataactagtatactggagttggcactagttggagactgtgactaatgcccaagtttctttgcaatcaagccaagagtagtatttgtgtttggtggcttaccatcatcatccaccaaggctgcattcagtagtgacgttcagcaggctcaaaagagttcctgctgggagtcttgtgtctcatgctgagaagctgtccgcagatttggtcttgtattatatgcaccagtaaagaaagggagtaagagagaaggcgagaggagcaagtgaggccgaaaaaatatgtgcttctttgtaagtctgtctctgtgtgacgataggggccaaaatgccctagtcaatcataagcaatacagtatttgcaatgtcattttgcaagcctagcacttccagagcatcatgtagataaattttctatcctgtgtgtatgactgagatcaagttttcttatgtgactattgaccttttgtataaatttgacagtctggtgagctagctgagaatgttgctaagatgattaacccccactttgctgacaaagtggacatctctgaagttcaggtgactgatcattttcctttgttcttgtttttgttttttttgttctacccacccaatgtgactgttctagcagtagacattcaactgctatgtttggtctttgaactactgttaacattctagaaatttctccatactacaatgctggcaggatgagttctcagctgtgatcatgaaagcgttgatgacacttgtacatggccttgaaaccaaatttgatgctgaaatggttgcaatgactcgcgtgccatggtccacccttgaaagtgttggcgaccaatcagagtaggattttatttaatttcttttatattacataatttactggtatttcatttttttcaaaagccttatcgtgtacttgaaactagttgaaacaattgatcagtgtacttcacagaaatccaagcccacaatctagattttatgggcaagtgaaaaaaatgggagtctgtcccatagacagcaataataatagggatctattttttgaccagaagctgcatatcgtggactgtaaagaaatgcaaatatactaacttatatggtagattgctggaaggaacagatttagtaaggagcatggatagaaactgctagcaaaaaatcatgtctccagtatcccatcccttcaagtttgaataaatatagtctgttcaaatgccatccattagcaaatgtgaaaatcagctagttaactcctggatttgcactatatacatataagttttaaatggatctttcaaattttgaaatagtcattattctttgaattgcacaaaagaaaaaaataatttgcatgtgtaaagattatttgggttgcatattcttcagattagccaaaaaatacatttgattattcttgagtacatgaatatccgttgacaggattcactgttccatgccagatacgtaaatggtgtcagctctattctgtccagcagtattcctgtgctcggtaacctgctttcaccaacctacttccagtatttcctggacaaagtaagttctgtttcgagtgctttctttatcctagtaaaaccgtgtaggtccttattatcttgtgttatgaaccatatattggccatatcaagcatagttataattacctgtgttgttctgatgcagttggcagcctctcttggacctcggttttatctcaatatatacaagtgcaagcatatatcagaaactggtgcacagcaggtcaaatttattccttatgaagctctctcgtttctgttcagcacattcctcaccactacctttgcattttgtggcagatgcttttggacactcaagctgtaaagactattctgctagacatcccatctcttggaaaacaggtattcttatcgccactaaatcatcgtggcatattgcatgaagtattgtatcttttagttactaagtagtgggttaagggaacctgccaagtgggaagcatttgttggatttgtggacgaaatttggctctgggaagaaatatgtagtaaaagctatctgattcttttatcactcaaaggttggcagcaaacatatactccatctgtttcacgatgtaagactttctagcattgtccatattcacatagatgttaatgaatctatacatataataatgtctagattcattagcatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaacggaggaagtacaaaatatttgcttagcaaaccaggatgttggctgcaaaagacagatgtataattcaacacttagttgcaggtagacagccttttaagtttgctccatattttacatgtggtttcttcaattgtaatagagtaccgctgcggctagctactccaagtttgtaagccgggaaatgagtaaagctgaagcactcctaaaggtattgggggaaaaagagaaactttgagctttgatgtacatgactacatctgtattgttgaaatcgcagtttaccactgactagctccaggtagaatcttcctaataacattgatggatgcaggttattttgtcaccagttgactctgttgctaacacctaccgcgctctcctaccggaaggaacaccacttgagttccaacggatacttgacctcaaggtttcattttcctgcatacctttcttcttctctatgccaagttcaatctccgtcctcggcctaacctgacacttgattttctgcacttggtgttcttgctttatcacagggattgaagaaagcagaccagcaaaccatactggaggacttcaacaagcatagccccgctatcaaacaccctgccgttgctccaacagttgcaccaccagttgccacttcatccgcccaccacattgcaccggtcaccaccccgaccgtttcgaccacaccaagcatggctaccttgacaggagctctggccaaccgggaggacgtgctcgcccgcgccgcggcgcttgggcggggcgcggccactacagggttcaagaggttccttgcgttgacagaggcggccaaagatcggaaggacgggccatttcgcaagctgttcaatgcttaggctttttttattattattattttgctcgtgcttgttgttcatagtttgcatctcctgcagtgcacatagatataggaaattttcccccacacacataaccttcggtgtataatgagctaacattttgatcccatcttgcggagtacgagtaattgaattgtattggaaaaaggtatcatcatagtttcagtaataatagtaggttctgttgttttgtttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0906200, RefSeq:Os01g0906200