Os01g0908800

From RiceWiki
Revision as of 05:17, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0908800| Description = Protein prenyltransferase domain containing protein| Version = NM_001051682.1 GI:115441734 GeneID:4324863| Length = ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0908800

Description

Protein prenyltransferase domain containing protein

Version

NM_001051682.1 GI:115441734 GeneID:4324863

Length

3137 bp

Definition

Oryza sativa Japonica Group Os01g0908800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41332895..41336031

Sequence Coding Region

41332999..41334519

Expression

GEO Profiles:Os01g0908800

Genome Context

<gbrowseImage1> name=NC_008394:41332895..41336031 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41332895..41336031 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgcctcccgccgcctcgcgcgaaagctcccgtctctcatctccaagcaccagcgcctcatctcgccggagatcgatgtcgagcaagccgccgagagccccgcgtcgtcgtcgtccatcccgctcgacccctccctgcccattctcccgctcgccgtctcccacctctcgccgccgagccctctcccggcgctcccctcggtgcacgcgtccaccccggccgcgctcctccgcatcctccgccgcgcgcggcaccacccgcgcctggcggcgctcgacctccacctcctcctcgcggccgcgtccgactccccggccttccgccccgaccaccgcctcacgtcactgctcgcctcccgcctcgcggaatcccgccgcctcccctcgctccgccgcctcctcgagctcgtcctcttccgcccctgcccctgcaccgacgactccatcttcgcctgccccgagctcctccccacattccgcaaggccatcctcgccttcgccgcctccggcgacatccccgccgcgtctgacgccctcgcgtccctccgccgcgccgctgattcacctctccccgccgaattctacaacatcatcctccacgcactcgcccgcctccgccgccacgaagacaccgtccgcttctacggcgagatgacctccacccaccgcgtccatccggatgtctacaccttcaacattctcatcaacagctcctgccgcgctgaaggcgttgatgctgcgatgcgctggtttcaggagatgcgacgttggagctgttcaccgactggtgtgagtttcaatactctgatgcgtgggttcttcagagaaggaaggtgcaaggagggcattaaggttgcacgcgagatgcttcagcttggatttgggctatcggttgcatccatggagatcatgatcaatgggttgtgccgtggtggggagcctctgaaggcggccgaggttttcatcgagtttttggtcgatggagtggtgccggaagggtttgattgcttggatctggttgagtctctgtgccgtgttcggaatgtggagaaagcagtggaagtggtggagttgatactggaaaggaattgggtatcctgcttgggtgtccctgctggtgtaacggttttggagtgcctgatgaaggaggggaagctggacaaagcatgccagatgatggggaggatggttgctgcggagatagttccggataccatttcttgtaactatatttttgaggcgctctgtgaagctgggaggacagtggacgcaaacaggctgaggctgcaggctaaagagaaaggttttcaggctgatggctttacatacagcatcattgtgcagggctttgggaggcagggaataaggaaagagggggaggctgtattggatgaaatgctggatgcaggatatgtaccaaacattgcgacttacaataggctgcttgatggcttacacatggggagatctatgcaattacaacaaaaatgttcaaggcataggaatgcagcaaactga</cdnaseq>

Protein Sequence

<aaseq>MAASRRLARKLPSLISKHQRLISPEIDVEQAAESPASSSSIPLD PSLPILPLAVSHLSPPSPLPALPSVHASTPAALLRILRRARHHPRLAALDLHLLLAAA SDSPAFRPDHRLTSLLASRLAESRRLPSLRRLLELVLFRPCPCTDDSIFACPELLPTF RKAILAFAASGDIPAASDALASLRRAADSPLPAEFYNIILHALARLRRHEDTVRFYGE MTSTHRVHPDVYTFNILINSSCRAEGVDAAMRWFQEMRRWSCSPTGVSFNTLMRGFFR EGRCKEGIKVAREMLQLGFGLSVASMEIMINGLCRGGEPLKAAEVFIEFLVDGVVPEG FDCLDLVESLCRVRNVEKAVEVVELILERNWVSCLGVPAGVTVLECLMKEGKLDKACQ MMGRMVAAEIVPDTISCNYIFEALCEAGRTVDANRLRLQAKEKGFQADGFTYSIIVQG FGRQGIRKEGEAVLDEMLDAGYVPNIATYNRLLDGLHMGRSMQLQQKCSRHRNAAN</aaseq>

Gene Sequence

<dnaseqindica>105..1625#ttccacagtaaaaagccttgtgctcttttccacttcgtcttcctcctgcgaacagtccaacccctccgcctccgcctctgcagtccgccgccggcggccggcggatggccgcctcccgccgcctcgcgcgaaagctcccgtctctcatctccaagcaccagcgcctcatctcgccggagatcgatgtcgagcaagccgccgagagccccgcgtcgtcgtcgtccatcccgctcgacccctccctgcccattctcccgctcgccgtctcccacctctcgccgccgagccctctcccggcgctcccctcggtgcacgcgtccaccccggccgcgctcctccgcatcctccgccgcgcgcggcaccacccgcgcctggcggcgctcgacctccacctcctcctcgcggccgcgtccgactccccggccttccgccccgaccaccgcctcacgtcactgctcgcctcccgcctcgcggaatcccgccgcctcccctcgctccgccgcctcctcgagctcgtcctcttccgcccctgcccctgcaccgacgactccatcttcgcctgccccgagctcctccccacattccgcaaggccatcctcgccttcgccgcctccggcgacatccccgccgcgtctgacgccctcgcgtccctccgccgcgccgctgattcacctctccccgccgaattctacaacatcatcctccacgcactcgcccgcctccgccgccacgaagacaccgtccgcttctacggcgagatgacctccacccaccgcgtccatccggatgtctacaccttcaacattctcatcaacagctcctgccgcgctgaaggcgttgatgctgcgatgcgctggtttcaggagatgcgacgttggagctgttcaccgactggtgtgagtttcaatactctgatgcgtgggttcttcagagaaggaaggtgcaaggagggcattaaggttgcacgcgagatgcttcagcttggatttgggctatcggttgcatccatggagatcatgatcaatgggttgtgccgtggtggggagcctctgaaggcggccgaggttttcatcgagtttttggtcgatggagtggtgccggaagggtttgattgcttggatctggttgagtctctgtgccgtgttcggaatgtggagaaagcagtggaagtggtggagttgatactggaaaggaattgggtatcctgcttgggtgtccctgctggtgtaacggttttggagtgcctgatgaaggaggggaagctggacaaagcatgccagatgatggggaggatggttgctgcggagatagttccggataccatttcttgtaactatatttttgaggcgctctgtgaagctgggaggacagtggacgcaaacaggctgaggctgcaggctaaagagaaaggttttcaggctgatggctttacatacagcatcattgtgcagggctttgggaggcagggaataaggaaagagggggaggctgtattggatgaaatgctggatgcaggatatgtaccaaacattgcgacttacaataggctgcttgatggcttacacatggggagatctatgcaattacaacaaaaatgttcaaggcataggaatgcagcaaactgaaagaatatcatagagatgaagaagctagcttggatttcagagagatgctagatgataccttctcaattgctctgatacaggttagaattttgccaaggatttgaactgaagcgtttctgattatacttttccactgcaaattactaatctcgattgcgtcacccttatgcattcttagtaaaagtgcctctatatcttctccacaggctctttcatgtgtgatgttaatcatatctggctatcggcaaacaaattgagtatttttatctatcttcatgcacattttatgtttattctgttaatcactttgcttagattcctagtaaggccttctatggaacaaaggaaaaaaaaggttgtcagggttgtttaatttatattatcttaggttgtaatgttttatctgtataccgtccagtggtcagttttaggtttttacacagatgcagcctagataaaccagaatttgctaaagaaagttaaatctgattttttaatagtgacgttgagcattggttttgtaattacttcatttacctcccggcgtaattacttcatttacctgttttgagtaccacttggattttttttcagggatcataaaccacatttttatagcatttttatgcatgtctctatcagtaaatttggtatggatttgaaatgtatcatcccctcagttatcttggctccaagaactgaataggaataactttgtaggaaccttgcctaagcaacgaagggtcaaatatttcatgaactcgtccttttcttttcaggagcttgagatcagagatcaatcagcaccggtctgccacagcaaccatccaagcctgagctgcgcgtggccactgccaaacgagttgcaactgcactaggccgaggttgcctatccggtcctgtttcagcccccagaacaccaccaccacctcatgctgctctgctcactgctattctcttggagcaggaggctgccgttgagttgctgctcaggatttccagtaagatgtttccttgcgaacacgctggcggtggtggcaatgtggattcagtcatcaatgatgggaaattgggaacgacatcagaggcaacaagtactgaactctgcaagagcctcagaattttctgaagggaaaggatgtgaggatggtatcttgtgcctgtgaatgtgacaagcaatgaagcaaatccctggaagttttgacatcggcttcacccaaaaacccgttgtcacatcaggtaccaaaaagttttggcaaatatattacaagatgatcttgtcaatctttcatatgttggatagaaatgctttaattttggtcgcttcagagatcatgcatctacttgtgacgttggctggcatgcatggctatttggtcatattggttatgtgtactttcggtggttgagcatttcattcaattatcatttttagattattgttgttctaacatatgcagaaattctgaagtagagcaaagtattcttgttttcatctattaggaggtatac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0908800, RefSeq:Os01g0908800