Os01g0909900

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Revision as of 05:17, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0909900| Description = Conserved hypothetical protein| Version = NM_001185774.1 GI:297720682 GeneID:9266385| Length = 4224 bp| Definition ...")
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Gene Name

Os01g0909900

Description

Conserved hypothetical protein

Version

NM_001185774.1 GI:297720682 GeneID:9266385

Length

4224 bp

Definition

Oryza sativa Japonica Group Os01g0909900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41394534..41398757

Sequence Coding Region

41394534..41394653,41395220..41395639,41395735..41395780,41395816..41395902,41396605..41396846
,41398749..41398757

Expression

GEO Profiles:Os01g0909900

Genome Context

<gbrowseImage1> name=NC_008394:41394534..41398757 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41394534..41398757 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgactctgctcaggtgctcaggtgctctgctctgcccccatccttcctgccaaccaccgtgttctgctccaagctgccgacaccagcaccaccatggtgaacactggcgaatcgagcaaaagtaccctatcctcattagaggaactccaatgacatgggatgggaatgaggcaaaacattcaatgaatcaaacaaagatagggtccaatgcttattatgtggtcacaaaatgcaggatcaaagaacatattggccacattataccatgcaaagtctattcacatcacaagacattggccttgatgaggaagcacacgaagaagagagataccataaggccgggtgtgactagatttgctttagcatttctaaccttgcaaagcttgattgagaagaagcgtgagctaagggcaatggcgcttagtgtggagtgggattgtgggaacaatgcacccgcactaaaaaaagcaaaaggcaagatagctacctctacactaatgagtaggaccttttggaatgatgtttctcagtgtttgaaggtttttgagccattagtcaaagtacttcacatggttaatagtgatgaggcaaagaaggaaatcatggtagctgcaaaaaacttggagaacacctacaatcccatctttgaacatattgctaaaaagatggaggatgcattccatgcgcaagggtggatcactgatggtggagatgaggaagatattgatcccatttcaggacttccattcagtctcatctatgaagcaagtggggctactaaagccatgcaacctcgtaggagtgctagagtgagggagcttcatgaagatgatttcaattctggagaagaagatgaggccaatgaagagggtattgactttgagtctgacaaggatgagatcgttccaactaaactgtactga</cdnaseq>

Protein Sequence

<aaseq>MTLLRCSGALLCPHPSCQPPCSAPSCRHQHHHGEHWRIEQKYPI LIRGTPMTWDGNEAKHSMNQTKIGSNAYYVVTKCRIKEHIGHIIPCKVYSHHKTLALM RKHTKKRDTIRPGVTRFALAFLTLQSLIEKKRELRAMALSVEWDCGNNAPALKKAKGK IATSTLMSRTFWNDVSQCLKVFEPLVKVLHMVNSDEAKKEIMVAAKNLENTYNPIFEH IAKKMEDAFHAQGWITDGGDEEDIDPISGLPFSLIYEASGATKAMQPRRSARVRELHE DDFNSGEEDEANEEGIDFESDKDEIVPTKLY</aaseq>

Gene Sequence

<dnaseqindica>1..120#687..1106#1202..1247#1283..1369#2072..2313#4216..4224#atgactctgctcaggtgctcaggtgctctgctctgcccccatccttcctgccaaccaccgtgttctgctccaagctgccgacaccagcaccaccatggtgaacactggcgaatcgagcaagtaagccattctctttgctttgctgctctctaccctctactcctctgagctcgtctcaaatctcaatattctagtattactatgtgctatgctctgttactctactctttacttctttagtatttacttgatctaaatgttcttgtacaaattgctcttgtttttgttgtgggtgtggctggtggtggtggattggtgttgattgcttgcattacaatgctttcttgctgccttgctggaatgcttgtgcttgcttgcttcgtgctggacatgctatttgtggtggtggattggctggtggttttgggtggatgcttgttgctgctgtgtatgtttgggaagaagggagggggggggggtcatttgactatgtaagtatttagtgatctgtcatctgtggcatgaaatcaagatatgcatcgtacaacctcagaaagtgtctcaatcagtcaattgtgtgatgaaattgatataatctcagatttagatgttcaataatttactaattttggtcctcctgtatatgcaaattgtctcatcaaccaccagtgttactggggtaacagaagtaccctatcctcattagaggaactccaatgacatgggatgggaatgaggcaaaacattcaatgaatcaaacaaagatagggtccaatgcttattatgtggtcacaaaatgcaggatcaaagaacatattggccacattataccatgcaaagtctattcacatcacaagacattggccttgatgaggaagcacacgaagaagagagataccataaggccgggtgtgactagatttgctttagcatttctaaccttgcaaagcttgattgagaagaagcgtgagctaagggcaatggcgcttagtgtggagtgggattgtgggaacaatgcacccgcactaaaaaaagcaaaaggcaagatagctacctctacactaatgagtaggaccttttggaatgatgtttctcagtgtttgaaggtaatacaagcatcctaaccttataccatgtgctgtcctgcatgttgatcaatcaatatttgcataattgacatgtgctatttcatctcttgcaggtttttgagccattagtcaaagtacttcacatggttaatagtgatggtctatcctgaccttcatctgtggacaaattctagaggcaaagaaggaaatcatggtagctgcaaaaaacttggagaacacctacaatcccatctttgaacatattgctaaaaagatggagggtaggcttgatgctccactgcatttgacagcatatatattgattccttattacacttaccatgatcaatctatctttttggatccttctatcatggatggtttctttgattgtattgaaaccttttatgtggtgatgatgatcttcaagctcaagtgatcaatgaacttcccaagtttaaggactagctaggggcatttgggaaacctgctgcggaactggatgtcaaaaatcgcatttctcctggtaattttctgctgcaactacaatctgcattatatttgttccatgttgcattgctgtgtcattaactcgttatttcactatttgttaaatgataaatcatacttcttatagctgactggtgggcagcatatggatgccatgttcctaatttgcaaaagatggccataaggatcctctccttgacatatagttcctctggttgtgaaaggaattggagtatttttgatatggtaacttgtcaaccttacatgcagatgcagttagcactttgtttagttgctactttcaattaagtatttacttcgtcacttctgaatcataggttcatacaaagaagagaaataggcttggggctggtcgcctaaacaacttagtctatgttcaattcaatgcaaggttgctgaaaagggctgagaaacgcaatggaaaaataacaaagatgtgctcctagctacagatgcattccatgcgcaagggtggatcactgatggtggagatgaggaagatattgatcccatttcaggacttccattcagtctcatctatgaagcaagtggggctactaaagccatgcaacctcgtaggagtgctagagtgagggagcttcatgaagatgatttcaattctggagaagaagatgaggccaatgaagagggtattgactttgagtctgacaaggatgagatcgttccaactaaagtttatgaccaggaggatgaagattgactcaatccttgatgattgatgtaatgatatcaattttgcttgcttaatggctacctctgtttcctctactatgcttattttgtccaagacttgtgagagttgagaaactgagaactctggtttagtttcattgtgctgatatggtgtattagaactgctatttggcttttccgctttggcatatgtaggttaattattctgaattttggataatctgcttcaaccttcaatgtttcattgcttcttgcaccttattcttgttgaggtgataccgtatttaaccatttgtactactgtcctgagtcctgtggaaacagtggtgattcaaccaaggaaccaaagctataaaggtacattttctcttaccaacttatttttgtattgcactattgccaacttaaaagttgacaattttaattatactagcttaactgactatatgattatttttccattgcattgctggcatgctgcttgttgatgatgagcttcttcactgagctgaaggcctaagccctggaattggaggtgcaagttgctatgttcagcctttggcatgttggcaccatcaaacaaaaggtaatataaaatattcaaatcctaaacacatgtattttctccaagttggctgttggcatgctgcaatttgctatgttatataaatgaaattgataaattggcttagccattggatacaagttgcctgctgactcctccctccctagtcagacctaggcgccacctagttggccctaggcgctaggcaccaccctcccgcccaactagcgtctagcgtcttcttgaacactgtagataaatgcctagatggggaaaggacattctctgtacaaaagagaatgttcattttttttaagtagcacagcatcatttttttttttagattttatagaatgtcttagcaaattttagagaggttatgagtcaacctttgatgccatatttctgtacaaaaaaagatgagcaccaaaagaataacatgttgtttaaagaaaatgtaattgttgccagtctccagattatgactatacacacttttaggatatgtctcggacccgatcattttcattaaaaggaagatgactccaattttgagtcttgaaaacattcggtctctagaataaccttgatttattcatgcttcatgacatacctctatattccttttttattaggtcgcaacagaaaatggatggattggatccatcatggagagatgatttcctgttcatcttttaaacggacacaaatttcatttaaaggtacatttcaatttagtttgcgcatcaacttgttcaatggcaatgttttcctaaacatatcctaactgtatattgctcacgatgcaaaggtaaagcaatatcatgagtcaaatctttttatattttatctttgaattggtttgctttaatatatacatctctgtgctcagagatagattatttcattgtttagtttatcaatcttttttatacatgttttatttcattatttgtgaagccatgcttttgaatcctaaaatttgtgtaaccgatctgtttcgcaaggttgctgtggttcgtcaaactaagtgtaatctgctgccgctgtgctctacaaagctcattgtttcaacgttgtgtatttgacggctactgacaaaaggaccagggcagaaaaaaaatggagcctacatgaagaaatatgcaatatagtagtataactataagacttctgttattgcatccatgtttttgttaactgatcatgcaatctttagctcataacttgtggtagaaaaattgatttcatgtgtttaagagtgtgatgcgaggctgaaaacactctgtataaatggttgatactatatttttttagctgtactga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0909900, RefSeq:Os01g0909900