Os01g0918200

From RiceWiki
Revision as of 05:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0918200| Description = Similar to Ubiquitin-like protein SMT3| Version = NM_001051741.1 GI:115441852 GeneID:4324359| Length = 1998 bp| Def...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0918200

Description

Similar to Ubiquitin-like protein SMT3

Version

NM_001051741.1 GI:115441852 GeneID:4324359

Length

1998 bp

Definition

Oryza sativa Japonica Group Os01g0918200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41817470..41819467

Sequence Coding Region

41817694..41817762,41817879..41818028,41819284..41819370

Expression

GEO Profiles:Os01g0918200

Genome Context

<gbrowseImage1> name=NC_008394:41817470..41819467 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41817470..41819467 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgcccgcgggggaggatgagaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaagggacaggatggcaacgaggtgttctttcgtatcaagagatcaacccaactgaagaagctgatgaacgcctactgtgatcgccagtccgtggatatcaaatctattgccttcctgtttgatggtcgtaggctcaatgctgagcagacccctgaccagctcgagatggaagacggcgacgagattgacgccatgcttcaccagactgggggctctctgcctgcctag</cdnaseq>

Protein Sequence

<aaseq>MSSPAGEDEKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQL KKLMNAYCDRQSVDIKSIAFLFDGRRLNAEQTPDQLEMEDGDEIDAMLHQTGGSLPA</aaseq>

Gene Sequence

<dnaseqindica>1706..1774#1440..1589#98..184#caacctctccggcgacgcatcgaaccccaaaattcttcctctctcgagagagagctaggttaggatcggatcaatctctcgcttccttcccgtgaagatgtcgtcgcccgcgggggaggatgagaagaagccggcggggggagagggcggcggcgcccacatcaacctcaaggtcaagggacaggtgcgttttcctcctgccccttcacctgggatggagcgatcccgtggcggggttgattgcgtgatcggaatcgcgtcgattctatctagatgtgaatgtgttcgcttcctttgtagggattatggggcgtctgctcttgcgatcgaaatcgcgatcggaattgcgttgtgatgtggtcttagggtttgtaggttggaatttcaattccctatttgggcgttgtttgatataagtttgggtagaagaggaagttttagccgtaggaattatcgatcgatttgtgctagggcatggccgacctttgagtttctagcagcgaggtactcctacatgatgggagaattggttaagcacataggggttgtttatcatcagtaaaaattccagtccaatacaacttactcttgatcattggtaattttgtttgaggcgttaaccttgatatggtactctcttatgattttttgttccgagtatacatgataatttagttgaattttcattcagattatcagttcctatgatgttttagttgatgctggtgggtatcatactctcttagttcgcaatggctgaaaggagtttttgttcagcgatacagaacaatttgttgaagccaaatgggatgtttcattgctcagtatctccttcatacagcattgatcataattagtttaaaccctagttagttgcattctcgatttagactctggcattctcgaacatctgagtcataggcacacaactatgcacatcctttggctagttaattgtaatgatattcagagcaaatctgatctgtgtatgcctgttgcattttctgtctggaattgttaatatggtttttttcaaatactgccttataggacattttcatgtaccagggctgagtttttttgtgttaaatactcataaaggggagacttgctagttgcatgcatatcataagttgcagacaattctcaatttctgagtgtccagataaaatataatggcaagaatttgagaatatgcatttgtctgtggttgtgtgctaataggatattatacttcaattcaaaagttttagatcactcataaatttgcatcaactttgaagttgaatcatttatcaattgagtcactacgctgcaaattgaaaacaatgcatttatttgtttgcgatgatgagatgttgccagattttttttcttttgttagtaaagtgcattttatgttttggcgccataaaaccttatcattccttgtgctgtaggatggcaacgaggtgttctttcgtatcaagagatcaacccaactgaagaagctgatgaacgcctactgtgatcgccagtccgtggatatcaaatctattgccttcctgtttgatggtcgtaggctcaatgctgagcagacccctgaccaggtgcgtgatataccatactgccttctctaaacaatgagctgatgcaaatactgccttccctaaaacccagtgctatagctgatgcttttttaccactgcaaactgtttgatttcagctcgagatggaagacggcgacgagattgacgccatgcttcaccagactgggggctctctgcctgcctagagctcatatgaagctgttgcaacaatgcaaccgcattactattttctgccttgttagagtcagtcagtctagaggacatgaaactagtctaaagaacttgtgaatcgtttggtcctgtgccccagctgaaggacattagggtggctttgtttagcgagacttggtactttggtgtgttaatccatcgcctaatttatccatcctttgctggtactcccgatgat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0918200, RefSeq:Os01g0918200