Os01g0919600

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Revision as of 05:18, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0919600| Description = Protein of unknown function DUF707 family protein| Version = NM_001051747.1 GI:115441864 GeneID:4324366| Length = 49...")
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Gene Name

Os01g0919600

Description

Protein of unknown function DUF707 family protein

Version

NM_001051747.1 GI:115441864 GeneID:4324366

Length

4945 bp

Definition

Oryza sativa Japonica Group Os01g0919600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41883262..41888206

Sequence Coding Region

41885027..41885200,41885298..41885483,41886267..41886455,41886817..41887151,41887565..41887988

Expression

GEO Profiles:Os01g0919600

Genome Context

<gbrowseImage1> name=NC_008394:41883262..41888206 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41883262..41888206 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgagctcacaagttgcttctgtttctgacggattaccacaggcacagggtccagctgcaccgaatgactcgccgcgcaagcggttctccggcgtcgcgccgccggcggcgctcatcttcttcgtgctggtgttcgccggcggtgcaatcgtcacgcttgatcacaaggagaatttgtcaattcttcagttacggccgagagaaatggtcgtaagcgagacggagacgagggctccgacgagcgaggtgcaagagacggagacgagggctccgaccagcgaggtgcaagaggcaggcaccggcgccgccgccggcggcgtccagcgagcggaactcgccggcagcagcatctgcgagaatcagtgcaggccttcaggcagcgagccattgccgaagggcatcgtgcaggacaagtccaacttcgagatggagccgctcggcggcaaccccgaacggcgcgccgccgtcgcccggccggcgaagagcctcctcgccatccccgtcggcataaagcagaaggccgtcgtcgacaagctcgtctccaagttccccggtgacaggttcacggtgatgttgttccactacgacggcgagatggacgggtggagggaactcgggtggtcggaccgggcgattcacgtggcggcgaaggaccagacgaaatggtggttcgggaagaggttcttacacccggacatggtggccgagtatgagtacatcttcctctgggacgaggacatcgaggtggacggcttcgaccccatccgctacctccgcgtcgtccgccgcgaacgcctcgagatctcccagcccgcgctcgaccaccgctcccagatccaccaccgcctcacactccgcgcccgcaaaggccaagttcacaggagattctacaagacgaggggaggggggagatgcgacgacaacagcacggggccgccatgcacggggtgggtggagatgatggtgccggtgttctcgcgggcggcatggcggtgcgcgtggcacatgatccagaacgacctcatctacgcgtggggcctcgacttcaagctcgggtactgcgccggcggcgaccggaggctcgccgtcggcatcgtcgacagcgagtacgtcctccaccgcggcatccccacgctcggcgacggcggcggcaagccggcggcgaagcggtcgtcgacggcgacgaaggcggcgaccgaccggctcgccgtgaggcagcggtcgtacaccgagctgcagatattcaaccggcggtggaaggccgcggcggagggggacgtgtgctggaccgacccctacccgtag</cdnaseq>

Protein Sequence

<aaseq>MMSSQVASVSDGLPQAQGPAAPNDSPRKRFSGVAPPAALIFFVL VFAGGAIVTLDHKENLSILQLRPREMVVSETETRAPTSEVQETETRAPTSEVQEAGTG AAAGGVQRAELAGSSICENQCRPSGSEPLPKGIVQDKSNFEMEPLGGNPERRAAVARP AKSLLAIPVGIKQKAVVDKLVSKFPGDRFTVMLFHYDGEMDGWRELGWSDRAIHVAAK DQTKWWFGKRFLHPDMVAEYEYIFLWDEDIEVDGFDPIRYLRVVRRERLEISQPALDH RSQIHHRLTLRARKGQVHRRFYKTRGGGRCDDNSTGPPCTGWVEMMVPVFSRAAWRCA WHMIQNDLIYAWGLDFKLGYCAGGDRRLAVGIVDSEYVLHRGIPTLGDGGGKPAAKRS STATKAATDRLAVRQRSYTELQIFNRRWKAAAEGDVCWTDPYP</aaseq>

Gene Sequence

<dnaseqindica>1766..1939#2037..2222#3006..3194#3556..3890#4304..4727#actaaacatccctccattactcgcaaccccaactcctcttcgcgtctcccaactccgaattcctcctcctcatcgcgtgattccgttttgcgccgcctcgccttttggattgcgaactcgatttccaatcaaatgatcatctgccgcggttgcggctcgtggaggaattcgtgattgctctcccaccatggtacggccgccgccttcttgatcttctctgtttttttttcctttcatgccttatttttcatctgaatttttgagagtcttggggtatttgttccggttactggagttgattccgatagaggttgaattaaaattcgttaagtttgtggtttgtaacgttcttcccctgaatttacgctgctctgctatctttgctgctggttcttcgctatcttcggtttattccgttgctaaaagatcgaatttctccgggattgatgcgcacgtgatggtttatgatttcaattgtcttctaaaagttaatttttgagttgattcttttgcgattcgaagttctttccatatgtcttttgtttgttcttctgaagtattagctgttctgctttcgttatactctttaggtagttgtcatgcttacatcgcattggtgttgatttagtaacggaattccatgaacttaattgttgatttagtaacggaattccatgaattatgttcaaaggtttgatttttataatcgccacttctcgcacggaatctagctttcctgacctgcggtcctgccattttccatttgttttctccgtttagatttgatactacttgattcagtaactatagttattaatgagccataaattactcccctgttttaattcaatgactagtccaaagttttttattaatatccctgatatgttacatggatcatgtacatatatctgtaaattctccctttttctgttttggtttgtcctgctttttgttcctttttttttctctctgataattcccacacctaatatgtaatctgtaaacctcatttctattaatgaaatgactataagttagagcctactctaccttcttccgtcaaaaatatgttacatggatacctgccactattttctattgcagaatttgtgtcaatctgaatggaacagtcttaaactctgaaaaacatatttctacgcattattccgattgatttcttgttccatatacattccgatatgggtgggcactgggcagtgcaatcggttgccactgagtactaactcaagtatcgcgtaaaagaaagaggaagtctcctgtctcgtggtctcctccgctccttgcgccgccgccaagacgagtcgcagcgatctccatctggcgagcagagcagggaaggggatcctggtgagcatccacatctctttctgattcatctcgggactacttttgtctggaatttgcttgcgttaacttctcttcttgatctggaagaacctcttctcctccataatttaaacctctcagtttttaaccatagtgaacgtttctttgcttctactgcacccttgcagtagaattcagggggagttttagacctaagctataatagacttccttcctcgattgggttttcagggaatatgcctttgctttctcctccggttcttgatttcctacctgaagatattatctctctgatcaagactagttcgagcagacagattgattcagagattgcttcatggctgtgaccttgttcaatcttgaagcaaactaaattcgcaacacatgtgcgattatgatgagctcacaagttgcttctgtttctgacggattaccacaggcacagggtccagctgcaccgaatgactcgccgcgcaagcggttctccggcgtcgcgccgccggcggcgctcatcttcttcgtgctggtgttcgccggcggtgcaatcgtcacgcttgatcacaaggaggtatgcaccttgatgcttctttacatcaagcacagagatagatgaatgataaaatcaattctctgaattctgaaagcttatgaatttgtttctgcagaatttgtcaattcttcagttacggccgagagaaatggtcgtaagcgagacggagacgagggctccgacgagcgaggtgcaagagacggagacgagggctccgaccagcgaggtgcaagaggcaggcaccggcgccgccgccggcggcgtccagcgagcggaactcgccggcagcagcatctgcgaggtcagaacagatgctcactccattccaatatataacaagagccttcaaaatttgttataaaatatgagaaactcttttaagcatttagatagacgtttcttacatatcaactaaatagttatcaactaaatagttatgaaaaactttcaaaaaaagataagaattattactctataaacatgtaagtttgaattcaacttctatatattataacaaaaataataaatttaactgaatatacgtatactagttagagtttaatttattattttttttaaatttatagaagtcgaattcgaacttacatgtttatgaaataatatattacctataattttttcaggtttttgtaactatttagtttacatcaagaaacgaatggacatctacctaggaaattagaatccatctcctctaaaatataacaattttttcacacgcattttattttcaaccaatcataaacttatgctctctctttttcataatgtaagttattctagcattttccacattcatattgatgttaatgaatctaaataaatatatatgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttatattgtgaaacggagaaaatagcattcaaattccctgcttactttctcttcttagtcaatcataatattttatcaaaattcttaataaccgtacttaacctaaaagaacagagatattacctgcaatgcaaacaatgcaggcaatgaaccgaacaaactaaactgctcgttaagtttgcagaatcagtgcaggccttcaggcagcgagccattgccgaagggcatcgtgcaggacaagtccaacttcgagatggagccgctcggcggcaaccccgaacggcgcgccgccgtcgcccggccggcgaagagcctcctcgccatccccgtcggcataaagcagaaggccgtcgtcgacaagctcgtctccaaggtaccaataccatatcttcttcttcagttccttccttcaacgccagcatcagtggcggaatatgatctgagtaaatcatgtagagttacagttacctacctatttagatagcacttatctacatatggtaaaaaattttagtgagatcttcgtgggagtttgggggctcaaagttaaagttcccaatctatctagatagagttacagtcccccacctatctacatatggtaaaaaattttagtgaggtcttcgtgggagcttggggactcgagaccccgctgctcccatgctggatccgcccctggtagcacttaaacttgagctgattctcgtcggcgacaatggttggcgtgcatgcagttccccggtgacaggttcacggtgatgttgttccactacgacggcgagatggacgggtggagggaactcgggtggtcggaccgggcgattcacgtggcggcgaaggaccagacgaaatggtggttcgggaagaggttcttacacccggacatggtggccgagtatgagtacatcttcctctgggacgaggacatcgaggtggacggcttcgaccccatccgctacctccgcgtcgtccgccgcgaacgcctcgagatctcccagcccgcgctcgaccaccgctcccagatccaccaccgcctcacactccgcgcccgcaaaggccaagttcacaggtaacaaatcaagctgtttcatgtgaaattgatagaaactctcttgatcccttgaggggacaattttttttcgtttgtcaaaaacttattcacatagttatatatttttttaaaaaaaagtttgataattcataccatatatatgccatttcacaaaattgtataaactcaacttatcattttggcatgaatagtatatcggaatttgtcttttttattcttaatgtgtagattgaatttgaatttaatttttggtaaaaatgttaaaagttactctactctacattatcattttttatatttatttgcattgaatttagtaggaaaaaaaacacacagagtggatatgcccccgaatcgacgacaatttcagcttcgtttttgttgagaaccgtaaaatttatttggaacaggagattctacaagacgaggggaggggggagatgcgacgacaacagcacggggccgccatgcacggggtgggtggagatgatggtgccggtgttctcgcgggcggcatggcggtgcgcgtggcacatgatccagaacgacctcatctacgcgtggggcctcgacttcaagctcgggtactgcgccggcggcgaccggaggctcgccgtcggcatcgtcgacagcgagtacgtcctccaccgcggcatccccacgctcggcgacggcggcggcaagccggcggcgaagcggtcgtcgacggcgacgaaggcggcgaccgaccggctcgccgtgaggcagcggtcgtacaccgagctgcagatattcaaccggcggtggaaggccgcggcggagggggacgtgtgctggaccgacccctacccgtagcccgccggcgacggcgaccgagctcgtcgccggcgatggcggtgggaccgggcgtacggctagttacttgagtagctgagatatgatagatacagagcttctcttcttgatgtacagatttgtttctctcatcgtcagaataagcaaatgtcagaatcaaagacgatgtaattacaatagttttttaaaaaagaaatatatcgatcaatcaaattttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0919600, RefSeq:Os01g0919600