Os01g0923900

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Revision as of 05:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0923900| Description = Cyclin-like F-box domain containing protein| Version = NM_001051778.2 GI:297598214 GeneID:4327256| Length = 3497 bp|...")
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Gene Name

Os01g0923900

Description

Cyclin-like F-box domain containing protein

Version

NM_001051778.2 GI:297598214 GeneID:4327256

Length

3497 bp

Definition

Oryza sativa Japonica Group Os01g0923900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42237772..42241268

Sequence Coding Region

42238229..42239470,42241023..42241112

Expression

GEO Profiles:Os01g0923900

Genome Context

<gbrowseImage1> name=NC_008394:42237772..42241268 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42237772..42241268 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggaggtggcggcgctgcggcagctggtcggcgaggtgcaggagctctgggacctctacggcgccaactcccaccccctcccaaggtggtatttactggactttgagcatggttcaatcaaagatgatcattgtagagcaaggactggatacaactcagaattactaaagatcatggaagctaaccaatctcctcctcgcaagcgctcacggagggacaaaaaccgtgagaaagcacccaactcaaactcaactgaagaaatgcaacaggagatttggagtgagttccctggagacctttttgaaaccgttgttgcaagacttccagttgctgcaattttccgatttcgcactgtttgccggaattggtattctatgttgggctcagaaagtttctctcagcagtactcagaagttccacagaggctgccatggttctatacaatcacccatgagaatgccagcaacaatgtagcgatgtatgacccttcgctgaaaaaatggcaccacccatcagttcccctggctcctgcaaagatagtaattccagtggcatctgcaggtggccttgtctgtttattggatcttagccacaggaacttctacatatgcaatccgctaacacaatcactcaaggaaattccgcgcaggtcagtccaggcatggtcaagagtggcagtagggatggtgatgaacggaggaacctctaatgaaggttacaaagtaatgtggttaggaaatgatgggaattatgaagtctatgattctatgaagaatatgtggtcttgtccaggcacttttcctccaagcatcaaacttccgcttgctctaaattttaggtcacagcctgtggcggttggcagcatgctatacttcatgtgtgcagaaccagagggtgttttgtcgtatgatgtaagcactgggatatggagacaattcgtcatcccactgccacttcatctgactgaccacacacttgccgagttccagggaagggttatgctggtgggtctgctctgcaaaaatgcagcgacatgtgtctgcatttgggagttgcagaagatgactctcctctggaaggaggtggacagaatgccaaatatctggtgcttagaattctacggtaagcacatgaagatgacatgcctgggcaacagtggtttgctcatgctctccttgaaggcgaagcggatgaaccgcctcgtgacatacaaccttttgaacaaggagtggcagaaggttcctgattgcatgctcccatgcagccgcaaaaagcagtggatagcatgtggcacagcatttggtccatgcccctctgccttggcctga</cdnaseq>

Protein Sequence

<aaseq>MGEVAALRQLVGEVQELWDLYGANSHPLPRWYLLDFEHGSIKDD HCRARTGYNSELLKIMEANQSPPRKRSRRDKNREKAPNSNSTEEMQQEIWSEFPGDLF ETVVARLPVAAIFRFRTVCRNWYSMLGSESFSQQYSEVPQRLPWFYTITHENASNNVA MYDPSLKKWHHPSVPLAPAKIVIPVASAGGLVCLLDLSHRNFYICNPLTQSLKEIPRR SVQAWSRVAVGMVMNGGTSNEGYKVMWLGNDGNYEVYDSMKNMWSCPGTFPPSIKLPL ALNFRSQPVAVGSMLYFMCAEPEGVLSYDVSTGIWRQFVIPLPLHLTDHTLAEFQGRV MLVGLLCKNAATCVCIWELQKMTLLWKEVDRMPNIWCLEFYGKHMKMTCLGNSGLLML SLKAKRMNRLVTYNLLNKEWQKVPDCMLPCSRKKQWIACGTAFGPCPSALA</aaseq>

Gene Sequence

<dnaseqindica>1799..3040#157..246#aaacccaccacttctcgcagcagcagcagcagcagcagcagcagaagaagaagagaaaagaaaagaaaagaaaagaaaatattttttgttgttgttctgggggaagaggaggaggaggagaggggcgccgctgcggcggcggcgggaggagggaggatgggggaggtggcggcgctgcggcagctggtcggcgaggtgcaggagctctgggacctctacggcgccaactcccaccccctcccaaggcaagcaactcttctccctctatcacttcttgctcctccaatcgattcctccgcccggatctgtgcctgcgattctccccccgattcgattcgattcgcctctctctggggttcttcttcatcatctggcgtcccctatgtgtaaagaaattttttttagatctttcactaacacgctcatgcgattttggctccccttcttgattggttattattattactgtatttccgttgcaaaaaatcttttatttttttggcttccttgtgctggtggatttggtagggtaggaaggatcaattcgaggaaacggtggcgtgcgtgacagaaatgggagaatttcgtgcatatgcttgttgttgtttgttaattaaattgattataattacccgtctccaagtttcaagccttgacattgcccgaagcgataggacaagattctttacgtatatccatggtattaagcgcaacaaagtccaccacttgggggttgtttttgcaccatgcgaggctctctgctcatcttaagatatcctaattaagttgacttcgggtgttgcactgtttctactgctatgtaagcaagggatcaagacaaaaatgaaaacaccgattattttgacgccggtttcgatgaaaagaaatataccagttgcaacgtttttttaactcgaaatccaaaggaaatacacgattactcgattaccaaggctaaagtgtggttgccatacaaaactaatgtaatttgttgagcaactgcaatctatcttatgtatatgaacgacagagtggtgcttgtttcggtgcattatcaggcactccgcacacgatgattataatattgatgctatatttttagttggacattttagaaaacaaagtatacagttttctgttgatttgcgcatatcttctgtgataaaataatgcaattctattggctacagttggtctcataatctcagcagtatcggatcgcttaatctgcttgcaatccgttttgggcatattaggaatttgcgcgccattggaagctgaggggcataactacatacctcaaacagcatgatgttattagtgcagtgctctcctgttcagttatatcggtcagagagatagagcatgtgtttatggtggatacacttgcactcaagggttatgtatgagtaatctagtttcgaaatgtgaaaacctgcagcgcacgtgttttccatctttgtcatcaaactttccatccacacatggagtgatagtccctagactccatttgacgctactattgcgtgaaaaggtcatttgcgtgactgataccccccctccccccataagtcaggtgctctagttcatcaacacttttggagactttgagtagactagttcatcatattgatcattccagcgtctgtagatagaatcatgcatttcctgctgtacaaagctgtggatcatcttatctctcttcactttaaaagttcttgtgcagttgtgcctactctccagaacttctttgctagtaaataagatggactaattggttttagtgatatcttgcaggtggtatttactggactttgagcatggttcaatcaaagatgatcattgtagagcaaggactggatacaactcagaattactaaagatcatggaagctaaccaatctcctcctcgcaagcgctcacggagggacaaaaaccgtgagaaagcacccaactcaaactcaactgaagaaatgcaacaggagatttggagtgagttccctggagacctttttgaaaccgttgttgcaagacttccagttgctgcaattttccgatttcgcactgtttgccggaattggtattctatgttgggctcagaaagtttctctcagcagtactcagaagttccacagaggctgccatggttctatacaatcacccatgagaatgccagcaacaatgtagcgatgtatgacccttcgctgaaaaaatggcaccacccatcagttcccctggctcctgcaaagatagtaattccagtggcatctgcaggtggccttgtctgtttattggatcttagccacaggaacttctacatatgcaatccgctaacacaatcactcaaggaaattccgcgcaggtcagtccaggcatggtcaagagtggcagtagggatggtgatgaacggaggaacctctaatgaaggttacaaagtaatgtggttaggaaatgatgggaattatgaagtctatgattctatgaagaatatgtggtcttgtccaggcacttttcctccaagcatcaaacttccgcttgctctaaattttaggtcacagcctgtggcggttggcagcatgctatacttcatgtgtgcagaaccagagggtgttttgtcgtatgatgtaagcactgggatatggagacaattcgtcatcccactgccacttcatctgactgaccacacacttgccgagttccagggaagggttatgctggtgggtctgctctgcaaaaatgcagcgacatgtgtctgcatttgggagttgcagaagatgactctcctctggaaggaggtggacagaatgccaaatatctggtgcttagaattctacggtaagcacatgaagatgacatgcctgggcaacagtggtttgctcatgctctccttgaaggcgaagcggatgaaccgcctcgtgacatacaaccttttgaacaaggagtggcagaaggttcctgattgcatgctcccatgcagccgcaaaaagcagtggatagcatgtggcacagcatttggtccatgcccctctgccttggcctgacagttttttttcactttcttcaccaaaggtggttgagatttcacacattccggatcattggcctatccttagatatttccgtcttaccgtgagaaggttatctgtcatgtacaaaatcatgtaacctgtggttgtttttgtatctcgctgaagcaatcgatatcgtttggtctatcatctagaggaatttggggtcggcactacaccaactggtttaagtcttcttagagatattaaggtccttgccagaaggctggacagaagacatctgtttagtcttggttttttgcttgttttcattatcatgatatcgtctcgtcttcagtgtgtattacttatttctgaatctgcagtcatctgcccaaaaactgagtatgtactctctatagtaataactggggctgaactgatgctcctgggtcttgatgatacttctttatcaatcactagttgcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0923900, RefSeq:Os01g0923900