Os01g0923300

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Revision as of 05:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0923300| Description = CBS domain containing protein| Version = NM_001185784.1 GI:297720702 GeneID:9271250| Length = 3839 bp| Definition =...")
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Gene Name

Os01g0923300

Description

CBS domain containing protein

Version

NM_001185784.1 GI:297720702 GeneID:9271250

Length

3839 bp

Definition

Oryza sativa Japonica Group Os01g0923300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42180186..42184024

Sequence Coding Region

42180330..42180490,42180956..42181124,42181214..42181346,42181429..42181599,42181783..42181865

Expression

GEO Profiles:Os01g0923300

Genome Context

<gbrowseImage1> name=NC_008394:42180186..42184024 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42180186..42184024 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatggcggcgtgggaggcgcgcacagctcgcggaggagcgtgtcctcgtcgaccggatccaggaggagggccgggcccacggagaacggccaccacgacgccgccgctgccgccgccggcaggaggtcctccgcttccatctcccgcgcctcgcagcagtcgatgaccggggagaggaccgtgaagaggttaagattgtccaaggcactgacgattccggatcacacaaccgtctacgaggcttgtcggaggatggctgcacgcagggtggacgctgtgttgctgaccgactccaatgctttgctgtgcgggatccttactgacaaggacataaccacaagagtaattgctcgcgaattgaagctagaagagacacctgtttcaaaggtcatgacaagaaatcctctctttgttctgtctgacacactcgcggtcgaggcattgcagaagatggtgcaaggtaagttcagacatttacctgtcgtggagaacggtgaagtcattgcactgctcgacatagccaagtgcctgtatgatgctattgcgcgaatggaaagggcagccgagaaaggaaaagccattgctgctgctgttgagggtgtagagaagcactggggagcttctgtgtctggtcctaatacttttattgagactcttcgagagcggatgtttaggccatcactatctaccattatttctgagaattcaaagtag</cdnaseq>

Protein Sequence

<aaseq>MDGGVGGAHSSRRSVSSSTGSRRRAGPTENGHHDAAAAAAGRRS SASISRASQQSMTGERTVKRLRLSKALTIPDHTTVYEACRRMAARRVDAVLLTDSNAL LCGILTDKDITTRVIARELKLEETPVSKVMTRNPLFVLSDTLAVEALQKMVQGKFRHL PVVENGEVIALLDIAKCLYDAIARMERAAEKGKAIAAAVEGVEKHWGASVSGPNTFIE TLRERMFRPSLSTIISENSK</aaseq>

Gene Sequence

<dnaseqindica>145..305#771..939#1029..1161#1244..1414#1598..1680#gcagcctccggtcgcctcctccgccatctactcggagctcccggatcgaggggagcgctcgccgccgccgcagcgacctcgccggatcacggcggcgggggccgatcgatcggaggtcggtcgattgccttcggcgggtgggagatggatggcggcgtgggaggcgcgcacagctcgcggaggagcgtgtcctcgtcgaccggatccaggaggagggccgggcccacggagaacggccaccacgacgccgccgctgccgccgccggcaggaggtcctccgcttccatctcccgcgcctcgcagcagtacggactccccgcctcgccctttctgtttttcttttttttttttggtagtattacttctcttggattgggagatgctgtaggtggcggagaagcgtgggattcaggcgttgccttggggttgatagttaggccttttaggggggatacttttatttggtgtcgctttgtttgcaacctaggctagatttgatctgatggaataacaaaaaagattacgacacagtagcactacgaactagaaaactgaagaatacaaatccaattaatctgttataatgatgtatgaatgctactagtagtttgttgaattttaattcggtaacgcagataacttcatttacaatttacaagcaagcttgtcttcaatatgacatgcataaccggttaatagtgcattgatgcgaagtgagtaaaaccgaaatgctagcgggcagcattgcaactgaagagtatttgcctcaggtcgatgaccggggagaggaccgtgaagaggttaagattgtccaaggcactgacgattccggatcacacaaccgtctacgaggcttgtcggaggatggctgcacgcagggtggacgctgtgttgctgaccgactccaatgctttgctgtgcgggatccttactgacaaggtgatgaggattttctttgatgtatgtcctcaataggtgttgaattggaaaattattcatttctcactcttttgctaacctccaatcaggacataaccacaagagtaattgctcgcgaattgaagctagaagagacacctgtttcaaaggtcatgacaagaaatcctctctttgttctgtctgacacactcgcggtcgaggcattgcagaagatggtgcaaggtgggtgaagtcccaaacactatctctggtcccttgtttgcacttctcttgattttcctgagaatgtatcacttcattccaggtaagttcagacatttacctgtcgtggagaacggtgaagtcattgcactgctcgacatagccaagtgcctgtatgatgctattgcgcgaatggaaagggcagccgagaaaggaaaagccattgctgctgctgttgagggtgtagagaagcactggggagcttctgtgtctggtctgtacttgatcacattgtccttttcctcctgattctgcctgttttaaaaagacattctgttatgttccacctgcttcttatattgtcatgtattggttacttctatgataaactttactgcctgaagttttaggctttttctagcatgcattattaacactttctccatttactttgcaggtcctaatacttttattgagactcttcgagagcggatgtttaggccatcactatctaccattatttctgagaattcaaagtaggtaatatccattcctttttcaagttttaggcttttccagcatttcaggaatttaagtgccattgttgaacaactgacttattgctgacaaacttcttagagtggtgactgttgcaccaactgacacagtgttgacggcatcaaaaaagatgcttgaagttaaagtaagttcagcggttgtagcaattgaaaacaagcctggggggattctgacgtgagtatctcttctcagtttaattataccattttgactgttgaactaacatctgctatctttcttacatcagctctagagatattttgatgcgtgttatagcccagaatctcccacctgaatctactactgttgagaaggtaaggaagtcttaacatggaatgtctgctatgtttttcttaatctctttaactatcatggcatcatgcttgaaactcctttctacaggtcatgacccagactcctgaatgtgccacggttgacactccaatccttgatgccctccatacaatgcacgacggaaagtttttacatttgcctgtcttagacaagggtatgtccatgtagtgcaatggattatatctaatttatttattggaggtctactaagttgttgacatgtgttgtctatatccagatggaaatgttgtaactgtagttgatgtccttcacataacccatgctgcaattgcaactgtaagtgaaaagttccagctgcttgatatattttctctgtgtccttgtgcatacagtcttacacaatactcactttgtcagcatgcattgtaaaatgctgagagaatgcatcacgatgtggaacctgtcattattacatgtcttttgctttcattctattaagatggattgagtatcatgctgtatgcaggttggaaacagcgcgggatctggatctgaggcgacatcagctatgatgcagagattttgggattcagcaatgtccattggacctcttgatgatgatgatgactccagaaggttagtatctttgcttatatcttatcattttgataatctgatggcatggttctgtcatgatttataattcacttggcatattatcagtgaaggatcaactaaagtggcgtctgaggcaacagatgtaggaagatcagctttttatccggcttctggtttgtccaacacattcgggttcaagattcaagacaaacaaggcaggatgcacagatttaactgcggtatgcatcttagtttcatgccaacagggaattgtgttatcaatgttctttctgcccttccttttgttgtatttctaattatttatattgtatccttggtttcatgtgtgatatgcttcaaacttcagaaacgagcagcttgacagagttgataaccagcattctacagaggcttggcgatgacatcgatagaaaaaacctaccacaaattttggtaaggactcagctccctcctcaacatgtacccacacaggcagtaccagtatgataactcccttcctcgaaaagaaagtatgataattctctaaggcttccttttctttcgttacaccatgtggcagtatgaagatgaggatcatgataaggtcatactttcatcggacagtgaccttgtagctgctgtggaccatgcaaggcaaatcggttggaaggtaattctctttcagtttaagatagtagttcttttcccctcccctgccagccaaacggtgctcatctctgaccccatcttgcagagcttgaagttgcacttggattacgccggtgttggtcgccggaagagaggcggtggtggcacttcagacttcgagtacgctggaaaggatgcgtgggcttcagcctacagcgctgtggctgcaggagcagctcttgttgcaggccttggcgtgatggcttacctgaagagagcaggctaggcttgcagctttgcagttgcagatgcagatgcagatgaggctttcatcttgtgatgatgatgatacgaaatgttacagaatcaaatttgagcagattggtgtgtaaattaattcttgtggggaaaaaaatctgtaataatctcacggcagcggatggctgcctacatataatgacgaaattttccggtggctaaaaaaatgtctggtattcagcttgtatcgccactgtacaatgaagcaaatgctctgtact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0923300, RefSeq:Os01g0923300