Os01g0927900

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Revision as of 05:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0927900| Description = Similar to Aspartate kinase precursor (EC 2.7.2.4)| Version = NM_001051806.1 GI:115441982 GeneID:4326958| Length = 4...")
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Gene Name

Os01g0927900

Description

Similar to Aspartate kinase precursor (EC 2.7.2.4)

Version

NM_001051806.1 GI:115441982 GeneID:4326958

Length

4303 bp

Definition

Oryza sativa Japonica Group Os01g0927900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42503505..42507807

Sequence Coding Region

42503774..42503896,42503982..42504044,42504130..42504245,42504700..42504817,42504894..42504986
,42505086..42505205,42505420..42505536,42505690..42505785,42505883..42506032
,42506404..42506558,42506644..42506684,42506763..42506845,42507315..42507752

Expression

GEO Profiles:Os01g0927900

Genome Context

<gbrowseImage1> name=NC_008394:42503505..42507807 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42503505..42507807 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatcgctctccgattagcggccgcgccgctccgcctccgcctcgtctcgccggcccctccggcgatcggcggcgcgggagatggaggacgacgaggaggaggaggagcagctcgtatcggtgtcctgggcagggctcgctgccgccgccgccgcggcggaggcgggagactggaggtggcggcggcggccgccgatgactccgctcgctgtcgggccaagggagtgggcgccgccgccgccgcggcggaaaccctaggtgggatcggggtgggaggtggggaccagctgagcgtggtgatgaagttcggggggtcgtcggtgtcgtcggcggcgaggatgcgggaggtggcgggcctcatcctcgccttccccgaggagcgccccgtcgtcgtcctctccgccatggggaagaccaccaatctcctcctcctcgctggtgagaaggcagtgggatgcggcgtgatccgtgtttcggaaattgaagagtggaatttgatcaaagatctacacattaaaactgtggaggaacttgcactgccaagatctgtaatacacactatgctggatgaactggagcagctcttgaaaggtattgcaatgatgaaagagctgacacttcggaccactgactaccttgtttcatttggggagtgcatgtctacacggatttttgctgcttatttgaacaaaatcggagtaaaagcacggcagtacgacgcatttgatattggtttcataacaacagacgatttcggaaacgcggacatcttggaggcaacttatcctgctgttgcgaagagattacatggagactggattcgtgatccagcgatacctattgttactgggttccttgggaagggctggaaatcaggcgctgtaaccactttaggccgaggtggcagtgacttgactgctacaaccattggtaaagccctggggttgagagaaattcaggtatggaaagatgttgatggtgtactgacctgtgatccaaatatctacccgaatgcaaccactgtgccatacttaacatttgaagaggcagcagaacttgcttattttggtgcccaggtattacatccacaatctatgagacctgctagagaaggtgatataccagtcagggttaagaattcgtacaaccctaaagctccaggcaccctgatcactaaacaaagagagatggataaggttgtgctaactagcatagtgctcaagtcaaatgtcactatgttggatatagtaagcactcggatgcttggtcaatttggttttctggcaaaggtcttctctatattcgaagatctagggatatctgtagattgtgtggctactagtgaagttagtatttctgtgtcgcttgatccatcaaagatctggagcagggaacttattcaacaggaacttgaccatgtagttgaagagcttgagaaaattgcagttgtccatctacttcagcagagggcaataatatcactcattggaaacgtacggcgatcatctcttatactggaaaaggcctttcaagtgttgaggaaaagcggggtgaatgtccagatgatctcgcaaggtgcatccaaggttaacatgtctctgattgttcatgatagcgaggcaaagcagtgcataaaggccctccaccaggcgttcttcgaggacgatgtcctgacagaagtcgaggaagaagcccttcacatgagctga</cdnaseq>

Protein Sequence

<aaseq>MAIALRLAAAPLRLRLVSPAPPAIGGAGDGGRRGGGGAARIGVL GRARCRRRRGGGGRLEVAAAAADDSARCRAKGVGAAAAAAETLGGIGVGGGDQLSVVM KFGGSSVSSAARMREVAGLILAFPEERPVVVLSAMGKTTNLLLLAGEKAVGCGVIRVS EIEEWNLIKDLHIKTVEELALPRSVIHTMLDELEQLLKGIAMMKELTLRTTDYLVSFG ECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFGNADILEATYPAVAKRLHGDWIR DPAIPIVTGFLGKGWKSGAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDP NIYPNATTVPYLTFEEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPKAPGTLI TKQREMDKVVLTSIVLKSNVTMLDIVSTRMLGQFGFLAKVFSIFEDLGISVDCVATSE VSISVSLDPSKIWSRELIQQELDHVVEELEKIAVVHLLQQRAIISLIGNVRRSSLILE KAFQVLRKSGVNVQMISQGASKVNMSLIVHDSEAKQCIKALHQAFFEDDVLTEVEEEA LHMS</aaseq>

Gene Sequence

<dnaseqindica>3912..4034#3764..3826#3563..3678#2991..3108#2822..2914#2603..2722#2272..2388#2023..2118#1776..1925#1250..1404#1124..1164#963..1045#56..493#tacagtgagctcccctctccctctctcactctaccaaactgcagaggagaggagaatggcgatcgctctccgattagcggccgcgccgctccgcctccgcctcgtctcgccggcccctccggcgatcggcggcgcgggagatggaggacgacgaggaggaggaggagcagctcgtatcggtgtcctgggcagggctcgctgccgccgccgccgcggcggaggcgggagactggaggtggcggcggcggccgccgatgactccgctcgctgtcgggccaagggagtgggcgccgccgccgccgcggcggaaaccctaggtgggatcggggtgggaggtggggaccagctgagcgtggtgatgaagttcggggggtcgtcggtgtcgtcggcggcgaggatgcgggaggtggcgggcctcatcctcgccttccccgaggagcgccccgtcgtcgtcctctccgccatggggaagaccaccaatctcctcctcctcgtactgtttccgccttccaattcccctcctcctcctctaggctatagatatgcctctctgtaatatgtgtctgctttaccaagtttttcctgaatccatgagcattcatttcaatgtaatcactgggtagtgttagatgaagtgaattttgcacctctactgccataatgatgatcgcaactgaccaggaatatgtggacattagagttgctaggtgaaagcttcatttctatccatcatttgctattgcagtgtctcaacattgactatatatataggctctctggacgatagtacacagtagctttagctgtaagtaaatgaaaatttggttaacggcaaaccttccttcagaattcattgttgcattgtagccgagatattcgagcgcagagcgacttaaagaatctttacttgtttagcactactactttgaagtcttgaacacatgttactgtgatccttgtaggctggtgagaaggcagtgggatgcggcgtgatccgtgtttcggaaattgaagagtggaatttgatcaaagatctacacattaagtgagtctacttttcaaacagtttactggtcaaactgttttctaatttcacttgatggtttctttgctatcaatccagaactgtggaggaacttgcactgccaagatctgtaatacacagtaactccactaccataataacatcttctagatttcgttccattaatgcaataatcttatggctccctgtgaatggaactcatagctatgctggatgaactggagcagctcttgaaaggtattgcaatgatgaaagagctgacacttcggaccactgactaccttgtttcatttggggagtgcatgtctacacggatttttgctgcttatttgaacaaaatcggagtaaaagcacggcaggtacttctttgcatattctttgtctacgcagtgaaccattgttcttcagagcatgtgattttatcaatctgcatgaatttgcaagcatataagtatttaattactatggaaggaagtattgaaagtttggtgatagcctctgaagctgtttttttttcctcacattttctaaactcatgcctgttagttgtatctcactgtctgtctgtgtttcacttttcggtattagatcctccattgcatctgtgattccttcccctaacgttagcagctttctaaattccctgtagatcaaatttcagctatacgtgttgtgaatcgtaatgtgaaattttgttggttttaaattgtatttgccaatgcttttgcagtacgacgcatttgatattggtttcataacaacagacgatttcggaaacgcggacatcttggaggcaacttatcctgctgttgcgaagagattacatggagactggattcgtgatccagcgatacctattgttactgggttccttgggaaggtattctcaccagagggtattcattatgaagcaaactattagttcattgtaattgttattaccttttcttttagaagtcaatcgtcatcacttgcagggctggaaatcaggcgctgtaaccactttaggccgaggtggcagtgacttgactgctacaaccattggtaaagccctggggttgagagaaattcaggtccatggtgaagtctaaatataattttgctcttcacaaacaaaaattagagcctacagtttgctattttaatttgtttatcatgctgattagcttagtggagcagaaagtcactacctactttgtctgaaagcataccactgcctgtcataggtatggaaagatgttgatggtgtactgacctgtgatccaaatatctacccgaatgcaaccactgtgccatacttaacatttgaagaggcagcagaacttgcttattttggtgcccaggtatgtattcatttggagcatgaatggcttacgctcttcacagttagatgtaaatgaaaatatttgtgcgaagtgcaaactgcaaagtaaatgctatatatgcaaagtgcaaagtgataagggtttgctcactatgtcaatttaagttgctcttcgcacgtttagaaaagagaacttttagttgatagtaatgcattgttgtgctccatgataggtattacatccacaatctatgagacctgctagagaaggtgatataccagtcagggttaagaattcgtacaaccctaaagctccaggcaccctgatcactaaacaaagagagatggataaggtctgtagcagattaattaaaacatgttctcacatcagtaccattcaactctcgggccatggattttatttctattgttctttatttttctctggataggttgtgctaactagcatagtgctcaagtcaaatgtcactatgttggatatagtaagcactcggatgcttggtcaatttggttttctggcaaaggtatgttcagcaattggtccagtaattttaattcacatgtcattattctgatcgctctctgtatgcgcttgagaaggtcttctctatattcgaagatctagggatatctgtagattgtgtggctactagtgaagttagtatttctgtgtcgcttgatccatcaaagatctggagcagggaacttattcaacaggcaagtgcacctatctacatgcaaaatcaagtagttgtaatactgtatgccggtacttctgaccaaactagtacattctttcaaggtaaaactaactctatataattgcaaaaaatgagcttattatttgtttatattggctgttgccttataaaagatactccctcagtttctagttaggtgttgttttggacatcaacacggtctccagtccgcaactttgaccattttaggttctaattgcatgttagtgataaatatggaacttactatggtattttgtgatggtaaatgttcattagtgcacttggactgctcattctctaaaggtggcatatataggtagtaaaaatgttagcttccccatagttttgtggcatgtagctattctcagaatcattctgctctgatcattgccttctcagtcttgttcgctttgttgccaaatttccaggaacttgaccatgtagttgaagagcttgagaaaattgcagttgtccatctacttcagcagagggcaataatatcactcattggaaacgtacggcgatcatctcttatactggaaaaggtatgattttctgcgcatacctaattctttccataggatagccgcaatactcacactgaacacacctacacatctggtcttgaaggcctttcaagtgttgaggaaaagcggggtgaatgtccagatgatctcgcaaggtgcatccaaggtagtccttgataagactgttctcacacttgacaacgctgtatccatgtcctggttcctgatatcaatgttgccgccttcaacaggttaacatgtctctgattgttcatgatagcgaggcaaagcagtgcataaaggccctccaccaggcgttcttcgaggacgatgtcctgacagaagtcgaggaagaagcccttcacatgagctgatcagcttagtccgtacaaccccagaaaaacaaatattgcaacctggagcaggttttctagcatcgcctccagttattttttcactcgtatgaccagcattcgatgcgttgtttcctcgctagttcaggtggtttagtttgacatttggtagctcgatctgttttttaccaggatgcaaaacgactggagcatgcgtcacaagttcctcgcttgaatgtgctttcactttggatctaaagtgccttaaaagtattaaaaaaacttgatct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0927900, RefSeq:Os01g0927900