Os01g0929000

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Revision as of 05:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0929000| Description = Conserved hypothetical protein| Version = NM_001051815.1 GI:115442000 GeneID:4326967| Length = 4168 bp| Definition ...")
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Gene Name

Os01g0929000

Description

Conserved hypothetical protein

Version

NM_001051815.1 GI:115442000 GeneID:4326967

Length

4168 bp

Definition

Oryza sativa Japonica Group Os01g0929000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42575289..42579456

Sequence Coding Region

42575454..42575568,42575972..42576066,42576218..42576331,42576472..42576576,42576667..42576738
,42576995..42577107,42577193..42577327,42577429..42577497,42577628..42577715
,42577815..42577886,42577964..42578064,42578324..42578441,42578542..42578601
,42578694..42578804,42578987..42579085

Expression

GEO Profiles:Os01g0929000

Genome Context

<gbrowseImage1> name=NC_008394:42575289..42579456 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42575289..42579456 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggaggcggaggcggggaggaaggagaagaaggaggtggtgcggctggagcgcgaatcggtgatccccatcatgaagcccaagctcatcatgaagctcgcctacctcatcgaacaacaatctgacagagaagaattcttgaagctctgcaagaggattgagtacaccattagggcctggtatcatctccagtttgatgatatgatggaactatttgctctttttgaccctgttcatggtgcccaaaaactgcaacagcagaatttctcgactgaggaagtcgatacactcgagcagaacttcctgacctatttctttcaggtgatgcaaaaaagcaatttcaacatattatcagatgatgaggttgagcttgctcattctggacaatatctgctgaatcttcccatcaaagttgatgaagcaaagttagataacaaacttttgtcaaagtattttaaagagcaccatcacgacaacctaccggagttctcagataagtatgtcatattccggaggggcattggactggatcgcactagcaactttttctttatggagaaagtggacatgatcatagctcgtgcgtggcgatggttcttggagaaaacaagactgcaaaagctcttctcaagaaagaaaagtgttaggccaaagacagattccaagaagaatgatgatctagttggtgaagaagaggacaaggagctatatgttgaacgcatacgacttgaaacaatgaatttgagcttgcgcaacttaattggcaaggttacaattcaagagcctacatttgaagaggtgattgtcttgtacaggaggaaaagccctaagggccagaatgatagatcaattcatgtaaagcacttcaaaaatattccaatggcagatatggagctggttttgcctgagaagaaaaatccaagcctcacaccaatggactgggttcagtttattgtttctgttgtcattggacttgttacacttgtcagttcgctcgaaatgcctaaagctgatttctgggttgtagttgccgtcctttctgccctggctggatattgtgccaagatctatttatcgtttcaacagaacatggcaacatatcaaaacctaataactcaatcaatgtatgacaaacagctagatagtgggaaaggcacacttctccatctctgtgatgatgtgattcagcaggaagtcaaggagattataatttcctactatattttgatggaaaatggaaaggcgactattgaggatcttgacttacaatgtgaagagttaatccaagaagagtttggcttgcaatgcaattttgaggtgatggatgctgttcagaagttagagaggcttggcatcattacaagagattctattggaagaatatgctgtctatctctgaagcgtgccaatgagatcattggcgctactacagaagagctggttatgaaggccagacaaagctag</cdnaseq>

Protein Sequence

<aaseq>MAEAEAGRKEKKEVVRLERESVIPIMKPKLIMKLAYLIEQQSDR EEFLKLCKRIEYTIRAWYHLQFDDMMELFALFDPVHGAQKLQQQNFSTEEVDTLEQNF LTYFFQVMQKSNFNILSDDEVELAHSGQYLLNLPIKVDEAKLDNKLLSKYFKEHHHDN LPEFSDKYVIFRRGIGLDRTSNFFFMEKVDMIIARAWRWFLEKTRLQKLFSRKKSVRP KTDSKKNDDLVGEEEDKELYVERIRLETMNLSLRNLIGKVTIQEPTFEEVIVLYRRKS PKGQNDRSIHVKHFKNIPMADMELVLPEKKNPSLTPMDWVQFIVSVVIGLVTLVSSLE MPKADFWVVVAVLSALAGYCAKIYLSFQQNMATYQNLITQSMYDKQLDSGKGTLLHLC DDVIQQEVKEIIISYYILMENGKATIEDLDLQCEELIQEEFGLQCNFEVMDAVQKLER LGIITRDSIGRICCLSLKRANEIIGATTEELVMKARQS</aaseq>

Gene Sequence

<dnaseqindica>166..280#684..778#930..1043#1184..1288#1379..1450#1707..1819#1905..2039#2141..2209#2340..2427#2527..2598#2676..2776#3036..3153#3254..3313#3406..3516#3699..3797#ctctccatctcgcgataattaatcgcgatttgcaccgctcaaaattccgatctgcgtttctcctcctctccaaatctccgcgtttcttcttcttccgcagcaacggatcgaggaggacacgagagattgcggcggcggctgtggcattagcttgatactggggcaatggcggaggcggaggcggggaggaaggagaagaaggaggtggtgcggctggagcgcgaatcggtgatccccatcatgaagcccaagctcatcatgaagctcgcctacctcatcggtaatgcgacctacctctctctccccctacttcttcgaagacatgttctgtttttagtatgatccgattgctatcacgaagctgtctcgtgagaatcttgccccttcttaatctgaaggaaagaagggatcttgcgttggttgattgattcactgtttacgtgtaaaaatggaatgtggttagagaaatcatctgaatcgttggcattgcaattcagtcttaggctttacctaatgcccacaataatagtgcagtattagtaatgtggcgttgagcatatcatgccaagtgttccagctttcttagtttctacattttgaagcaaaattagtctttctggatatatgaggagactgtgctactacttactgaaatttaaaaactgtttacctgtttcttgaagaacaacaatctgacagagaagaattcttgaagctctgcaagaggattgagtacaccattagggcctggtatcatctccagtttgatgatatgatggtgagagcttgcattcgttactgaagtcctgttctccatacattttcttttatggacttgatggagcttatgaccatcattaagatctgctgatttctggcagtgtttcacaatgtgatctgatctgtcagaactgctataatttccacaggaactatttgctctttttgaccctgttcatggtgcccaaaaactgcaacagcagaatttctcgactgaggaagtcgatacactcgagcagaacttcctgacctatttctttcaggtaaacaaactgtttgggagatggaactattatatgtctcaactacacatgaatgatcaggatatttcttaataagtattacaagggacccagatatatccacaatattacacaataaattgtatgaaatcttggtgcaggtgatgcaaaaaagcaatttcaacatattatcagatgatgaggttgagcttgctcattctggacaatatctgctgaatcttcccatcaaagttgatgaagcaaaggttaacatcctctccctccaggctgtgtcctaatctaaaaatcattggatttgacaatattattgtaaaatttgttttttactggtgcagttagataacaaacttttgtcaaagtattttaaagagcaccatcacgacaacctaccggagttctcagataaggtgagtagctaacattatgttctgtcttttacatctcttcagtgttatctatcagaatatttgtttatagaagatgagaaagatggttttgaagtggtgtaattgatggttagccagtgtattcctttttttcatgtgttgttagtgtagcagaactggatgcttgccctcctaatgaccgtgtgctgtggccaagtcatcctcaaatattgttcctgaaccatatgcacacctaatataatcttttatatgccagtatgtcatattccggaggggcattggactggatcgcactagcaactttttctttatggagaaagtggacatgatcatagctcgtgcgtggcgatggttcttggagaaaacaaggtgcgctatccactacatatgtattttcatgtccattttatcttgatcgtccaaaagattaactattttcacaatgaaattttagactgcaaaagctcttctcaagaaagaaaagtgttaggccaaagacagattccaagaagaatgatgatctagttggtgaagaagaggacaaggagctatatgttgaacgcatacgacttgaaacaatgaatttgaggtttgtgctattcttgaccttttaggccatcacagttcctgaaaacttgctattgcttgtcttctccactcatatttgatatttccttccttgttctgtagcttgcgcaacttaattggcaaggttacaattcaagagcctacatttgaagaggtgattgtcttgtacaggtaagtcccgtaaattatttgcatctgaggatgcaggaaacctttttcgggtgcgccctggttgtgaattggctgctttcatgatgtcttgaactactgtgttataactgatttctgactgttctttcaggaggaaaagccctaagggccagaatgatagatcaattcatgtaaagcacttcaaaaatattccaatggcagatatggagctggttttggtaagtgtagaagcttaatatgccaaagaataatgtggtgacatccatattgctttcttcaattggacttatgctgaagagaaattatgactgttgcagcctgagaagaaaaatccaagcctcacaccaatggactgggttcagtttattgtttctgttgtcattggacttgtaagtggactggaactggttgcacttgattgggttgtgattcatcacctgatgattatttttttcacattgctcaggttacacttgtcagttcgctcgaaatgcctaaagctgatttctgggttgtagttgccgtcctttctgccctggctggatattgtgccaagatctatttatcgtgagtgccttggttgatatatttgttttgattgggtattcgtcttgtcatcttgtcggtaatctgcattgtgtatataatagagcagggacagggaggatttttgtttactcatccagccagaattactttagaatacctccataaaatgcagttttgcttccctgattccttcagcattttcttatttatgatgatactttatttgctgtattggttgtattggacaaatttggtaaataagctacctttgattcaggtttcaacagaacatggcaacatatcaaaacctaataactcaatcaatgtatgacaaacagctagatagtgggaaaggcacacttctccatctctgtgatgatgtgattcagcaggaagtaggtctccatattgtagtacttgattcagaataagcatatcagagacttgtgctcacaattattttcatctttgtggtttctgaattctgatgtccaggtcaaggagattataatttcctactatattttgatggaaaatggaaaggcgactattgaggtattgctttggtatttgaaacaagcatgttttgtttctgaagttgtgcaagtataaaaattgagttgaatattcttggcactcaatgctaggatcttgacttacaatgtgaagagttaatccaagaagagtttggcttgcaatgcaattttgaggtgatggatgctgttcagaagttagagaggcttggcatcattacaagagtgagttcttacagcttgttacagcagtaccaaatcatagtgagatatatatccccaaaaaaaacttagataaatttcagaatgtatagaatctaaaagaatttttaaatgaaataccattatgttgttactcgcattttctctattttaatcatggataataaagccagtgatgcttgcaggattctattggaagaatatgctgtctatctctgaagcgtgccaatgagatcattggcgctactacagaagagctggttatgaaggccagacaaagctagttatccaattctatttgaaccaggtaatcctttggtggactctaggcttccatcattagattgtttctggttttttggatgggacattatattgtttctggaatactccaagaagtcctgacactgatttctttgcagtttaggggggcaataggtcctggacggctgcggaataattctccgatggaagttgagcagatatgctattgttgttctgttgtaggacctgctgtattatgcaatgtttaatgcatgttgtaagaaatttagtttcttcttggaacaaaatgtggaaagatttcagtaaaaaaaaatgtggaaagaggttcatgaactgctgccttgtttgttcagttaatgaatactcctac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0929000, RefSeq:Os01g0929000