Os01g0930900

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Revision as of 05:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0930900| Description = Similar to Short chain alcohol dehydrogenase-like| Version = NM_001051827.1 GI:115442024 GeneID:4326949| Length = 97...")
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Gene Name

Os01g0930900

Description

Similar to Short chain alcohol dehydrogenase-like

Version

NM_001051827.1 GI:115442024 GeneID:4326949

Length

972 bp

Definition

Oryza sativa Japonica Group Os01g0930900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42644073..42645044

Sequence Coding Region

42644073..42644164,42644291..42645044

Expression

GEO Profiles:Os01g0930900

Genome Context

<gbrowseImage1> name=NC_008394:42644073..42645044 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42644073..42645044 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcgtcgacgccggcggcgagcagagagcggcggtggagcctcgccggcaagacggcgctcgtcaccggcggcaccaaaggcatcgggcgcgcgatcgtggaggagctcgccgggttcggggtgagggtgcacacgtgttcacgccacgacgccgacctgcaggactgcctccgccggtggaacgccgccgacggtggcggcctcggcggcggcgcggcggcgcccgtcacggcgtccgtctgcgacgtgtcggtgcgcggcgacagggaggcgctggtggcggcggcgcgcgccgcgctcggcgggaggctggacatactcgtcaacaacgtcggccagacgctgttcggcgcggccgcggcgtgcgcggcggaggactacgcgcgcatcatggcgaccaacctcgagtcctgcttccacctcgcccagctcgcgcaccctctcctcctcggcgccggcggcgccgccgcgagcgtggtgaacatctcctccgtcgcagggttcatcgcctacccggcgctgtccgtctactcggcgacgaagggcgccatgaaccagctcacgcggagcctcgccgccgagtgggcgcgcgacggcatccgcgtcaactgcgtcgcgccgggcggcgtccggaccgatatcgccggcagcagcggcgtggcgctggagccgggggcggcgcgggcgatggaggagagggaggcggcgcgggtcgtcatgggccgcatcggcgagcccgaggaggtggcgtcgctcgtcgcgttcctctgcatgccggcggcgccgtacatcaccgggcaggtcatctgcgtcgacggtggccgcaccatcaccgcctag</cdnaseq>

Protein Sequence

<aaseq>MAASTPAASRERRWSLAGKTALVTGGTKGIGRAIVEELAGFGVR VHTCSRHDADLQDCLRRWNAADGGGLGGGAAAPVTASVCDVSVRGDREALVAAARAAL GGRLDILVNNVGQTLFGAAAACAAEDYARIMATNLESCFHLAQLAHPLLLGAGGAAAS VVNISSVAGFIAYPALSVYSATKGAMNQLTRSLAAEWARDGIRVNCVAPGGVRTDIAG SSGVALEPGAARAMEEREAARVVMGRIGEPEEVASLVAFLCMPAAPYITGQVICVDGG RTITA</aaseq>

Gene Sequence

<dnaseqindica>1..92#219..972#atggcagcgtcgacgccggcggcgagcagagagcggcggtggagcctcgccggcaagacggcgctcgtcaccggcggcaccaaaggcatcgggtaccgtgtgcactcgccgccgtcaccgtctccttacacagtagtactacgtgtgcacgcatgcatggcggattgctgacgtcatgcgttacgtcgtgttcgtgtgttgcttggtttaattggcaggcgcgcgatcgtggaggagctcgccgggttcggggtgagggtgcacacgtgttcacgccacgacgccgacctgcaggactgcctccgccggtggaacgccgccgacggtggcggcctcggcggcggcgcggcggcgcccgtcacggcgtccgtctgcgacgtgtcggtgcgcggcgacagggaggcgctggtggcggcggcgcgcgccgcgctcggcgggaggctggacatactcgtcaacaacgtcggccagacgctgttcggcgcggccgcggcgtgcgcggcggaggactacgcgcgcatcatggcgaccaacctcgagtcctgcttccacctcgcccagctcgcgcaccctctcctcctcggcgccggcggcgccgccgcgagcgtggtgaacatctcctccgtcgcagggttcatcgcctacccggcgctgtccgtctactcggcgacgaagggcgccatgaaccagctcacgcggagcctcgccgccgagtgggcgcgcgacggcatccgcgtcaactgcgtcgcgccgggcggcgtccggaccgatatcgccggcagcagcggcgtggcgctggagccgggggcggcgcgggcgatggaggagagggaggcggcgcgggtcgtcatgggccgcatcggcgagcccgaggaggtggcgtcgctcgtcgcgttcctctgcatgccggcggcgccgtacatcaccgggcaggtcatctgcgtcgacggtggccgcaccatcaccgcctag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0930900, RefSeq:Os01g0930900