Os01g0935700

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0935700| Description = Similar to Cytochrome c1 (Fragment)| Version = NM_001051857.1 GI:115442084 GeneID:4326795| Length = 4758 bp| Defini...")
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Gene Name

Os01g0935700

Description

Similar to Cytochrome c1 (Fragment)

Version

NM_001051857.1 GI:115442084 GeneID:4326795

Length

4758 bp

Definition

Oryza sativa Japonica Group Os01g0935700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42869352..42874109

Sequence Coding Region

42869947..42870000,42871157..42871365,42871685..42871964,42872054..42872125,42873314..42873430
,42873527..42873592,42873677..42873793

Expression

GEO Profiles:Os01g0935700

Genome Context

<gbrowseImage1> name=NC_008394:42869352..42874109 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42869352..42874109 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgctgggaggggcatcagtcagcttttgaagaaagcatttcgtccatctagctcatctccgctctcttcatcctggataaatcatgaagagtcctctggcttcactggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgctacaattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccacatgctggcatccttagctcatatgatcatgcatcaataaggcgtggccatcaagtttatacacaagtgtgtgcctcttgtcactcaatgtccttgatttcataccgagatttggttggtgtggcctatacagaagaggaaacaaaagcaatggctgctgagattgaagtggttgacggtcctaatgatgaaggtgaaatgttcacacgtccaggtaagctgagcgaccgtttcccacaaccctacgcaaatgagcaagcagctcgattttcaaatggcggggcataccccccggatctcagtctaatcacaaaggccaggcacaatggccagaactatgtttttgctcttctcactggttatcgtgatccacctgctggtgtttcgattcgtgaaggcttgcattacaatccctacttccctggtggtgccatagccatgcccaagatgcttattgatggagcagtcgagtatgaagatggcactccagctacagaagcccagatgggaaaagatgttgtctcgttcttgtcatgggcggcggagcctgagatggaagagagaaaactgatgggagtgaaatggatttttctactctccctcgcacttctgcaagctgcatattaccggcgcatgaagtggtccgtctacaagtcgcgcaagctggtccttgatgtggttaattga</cdnaseq>

Protein Sequence

<aaseq>MAAGRGISQLLKKAFRPSSSSPLSSSWINHEESSGFTGLRALAI LGVGASGLLSFATIASADEAEHGLEAPHYPWPHAGILSSYDHASIRRGHQVYTQVCAS CHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYAN EQAARFSNGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPG GAIAMPKMLIDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGVKWIFLLS LALLQAAYYRRMKWSVYKSRKLVLDVVN</aaseq>

Gene Sequence

<dnaseqindica>596..649#1806..2014#2334..2613#2703..2774#3963..4079#4176..4241#4326..4442#ctccatctccctctccgtttgactctccctgatccgcggagctctcgagcgcccgccgccggcgagcggggtgcagcgccgcgcgggcgacctcctccttccacctgcctccatcatcgctgcttgaatcgatccgaaggtattcgttcttctcccgtactccatcgtctaccacttccgggccagttttgagtagatagatactttgtactagattggtaatccgttcggatttggaactatccattttcttccggattccttcgatgcgtggtcggatggaaattgagtccacaaggggcagtttcatttcaaaacaagaggaattcggggttcagttcaatctccgcgacactagtttggcccctggtagtggtaggcgacagtgtaagatgatagtatccgtttatggggatttagggaactattatcaaatatcgttcctagtgtttttgtgtgagactgtcgcactgtatctctctctccattcgttacatctactgatgcaaagttaaataggagtataattgtgatgcaagtctgcaatcctgaaattttgatccctctgtttgtgatgcttgatacagcattgtaaatggctgctgggaggggcatcagtcagcttttgaagaaagcatttcgtccatctgtaagtactgtgagaacttcggttcccccctattcttgtacatggttcttttgctaaaaattataaatttattccacgtcctttctactactgcctctgttttagatttcaagtttgatcaagtttgtagacatatatactaatattacaatatcaaattagttttattaagtctataattgaatatttttcataatatatttgtcttgtgttgaatatcttactacttttttcctacaaacttggtcaaacttaaagcaataatcaaaatgacttataatctgaaacggaggaagtattgtatttgtgttattatcaatcaaagaatctccatcctactcgtccagacatttggattactgttatcttggtagttctagatttttccttgtaggtactttgtttggagtaaagcagctgccttctgttttagcctagttgtgttgtatagactataatgtgggctcaccaggggatgagaaagttggtgtcatgatggcagataagggcagcaggccagcagggttagggatactgtgtagttttaagggtgcgttcgggtttcagggatgggaattaatccctcccgcacggaaaacggagcgatccattagtgtgtgattaattaagtattagctttttttttcaaaaatggattaatttgatttttttaagcaactttcatatagaaactttttgcaaaaaacgcaccgtttagcagtttgaaaagcgtgcggcggaaaacgagggagaggggttgggaaaaggggcatccgaacacacccttaaacagtcaggcaaaagggcaatgcttctccaatcggtagaagaaagggaaaaaaccccacaacagctggagttatccccgtgcttggaagtaaaacaaggaaatgaaatagtgatagaaaacaaaaaggggtcaactgtcaggctctaacttaacaagaaactcctaatttatctcctacaactcttttataccatttgctttgctttgtgtcggttcctctaataggaatccacaacacctaaatgcaattgttgaatgaatggctgactcattaatactgcggcaactgaacaataatggtttaacttaattgactatttatttaagttaattcgctattgttatttgaaaccataaactttgcagagctcatctccgctctcttcatcctggataaatcatgaagagtcctctggcttcactggattgagagcattggctattctgggagttggtgcttctggccttttaagttttgctacaattgcatctgctgatgaagcggagcatgggttggaagccccacactatccctggccacatgctggcatccttagctcatatgatcatgcatcgtaagtttatcgaatagacttatttttgttaaatagcttgttctgactagagactacttgacttcatttcaagaagcaatcgtgcatctaatatataatgattaactagaaaaacatactccccccatcatgtggtacaacataaaagaaacatcagtgtactatgctgtttgttattttagagataagcaaatgttgcagtgtcaatgttactgttatatgcccatgctgctgaggtagtcttttgagctgttcttttttcatatttttatcttttctttcacctctttatttatttattttaaaaacatatgagcagaataaggcgtggccatcaagtttatacacaagtgtgtgcctcttgtcactcaatgtccttgatttcataccgagatttggttggtgtggcctatacagaagaggaaacaaaagcaatggctgctgagattgaagtggttgacggtcctaatgatgaaggtgaaatgttcacacgtccaggtaagctgagcgaccgtttcccacaaccctacgcaaatgagcaagcagctcgattttcaaatggcggggcataccccccggatctcagtctaatcacaaaggtgagactcacaaattgctgtcagtcacatgtggtgcaatttctcatctctagattgtatctaactctttgttttttacatattttcaggccaggcacaatggccagaactatgtttttgctcttctcactggttatcgtgatccacctgctggtgtttcggtaaccctctctcatacatattgttttgttattttagtgttggtcgctacttgtaggtttcacatatgattctctgagtatctgatttgttagatttgtagggagtggagataatttggtgtgtgctctatggttttgtaacagtttatatcaatggatgcattgggcagaccatgccacacattttttactggactacgagtccttgacaatgcaatatgtgcattcattgcttaagctacatctctatccatcatgcactatcttttttcatggtgatgaatacggtgtttcctgttctagtttagcgttcatgtttttcaaggtttctgtcctttcttgaattaatgcaacatgttatacttttttctttgttggtgctgttgaaaattccctctaggcatagttaccggctttccagatcctttcagagctttgtttttccttttagttctttctcttttactccctctattacaaaatataaggcacaactacttttcttagatgtttcataatataaggcgtgcatgcatgcatgcaattaactagcacctcttctccactaaattattattattttaactctttaattattaaaatctctaattctattgggtgtatgcattatatttattaggatgattcaaacaatgaggtgataataattgtttcttggtctttgggttaagggtgattatgccttatattttggaatggatggagtataaggttagttggaatgacgaacaccgcatagataggcattataccagcatgtaatatacaaaataccctttcttaattggttatgtactgtgtgtgcaaaaacttgtgttcttggtttgttttttttgaacaacgttttcaccaattttgttctactccgcttgaaattttggtcagtaatacatggaatcttggagtgtattgtgccactttctggtcaggaaacctggattatttcatagaacttgaaaggatctagcagcttgcaaatagtactgttgaatattctaatactgaattaaggatttaccagcttgcaaacatttccagtgaaacacatttttcgctcttggttgagattgcctgctaaagtgcttctgttattgttactcctcctagtgcactccctaaatttgcttttgcagtgtcctaaccttctggcgttgatttgaaatttagattcgtgaaggcttgcattacaatccctacttccctggtggtgccatagccatgcccaagatgcttattgatggagcagtcgagtatgaagatggcactccagctacagaagcccaggtagctcctgtttttgagttgtctgcactctgcaccgtttagttaagctgtggtttatcactgaagtattagactattttcatatgtaaattgtagatgggaaaagatgttgtctcgttcttgtcatgggcggcggagcctgagatggaagagagaaaactggtaaccctcttggaacctccctgtagaattgtcctctatttctactgttaattgtctaatttcttcatactggaattgtgctagatgggagtgaaatggatttttctactctccctcgcacttctgcaagctgcatattaccggcgcatgaagtggtccgtctacaagtcgcgcaagctggtccttgatgtggttaattgaggactagttcttcattttcttcaaagcatcggctgataatttgaagtattggaataatgcgtacatgaatcatgatgtacattttgccgttggcatggttaacatgcacaatactcttttcctttgttacatttactcccagctgtgctgggcattattttaaaattttggcctgtcaaatgtaccagcaagcatctaacagtatagtcaaatagatctcataagcatatttatactccgaaccagtgtaatgttaattttagtcatcagtatgagatgatggagaaaaaaaatgaagtgtcactaacactactgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0935700, RefSeq:Os01g0935700