Os01g0937400

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0937400| Description = Disease resistance protein family protein| Version = NM_001051870.1 GI:115442110 GeneID:4326533| Length = 4515 bp| ...")
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Gene Name

Os01g0937400

Description

Disease resistance protein family protein

Version

NM_001051870.1 GI:115442110 GeneID:4326533

Length

4515 bp

Definition

Oryza sativa Japonica Group Os01g0937400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42954154..42958668

Sequence Coding Region

42954451..42954498,42955541..42955753,42956832..42957995,42958295..42958600

Expression

GEO Profiles:Os01g0937400

Genome Context

<gbrowseImage1> name=NC_008394:42954154..42958668 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42954154..42958668 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgggattggagggatgattgcgagttccgtggcgaatcgggtcgccagcaggctcagcgagcttgtggtggaggaggccactctgctgtggagattcaaggacgacgtggacgacatggaggagaagatgagagatctggaggctgtgatacaagatgttgatggcaaagcacgccagggaggaaaagatggagaggcggaacggcggtggctcaacaaactcaagtccgtcgcctacgacgttgaggacgtgctggatgagctcgatgctgctcagctcatcaagaaccatcaacccaagctcaagttattcctttcccggaacaatccgcttctccggaagatgaccatagcccgcaacatgaagaactcgagggagaaaatagtctcaataaaaaaggatagcattaagcttcatcatgtgcatcgtgaactagtggcagaagggagtagagacaatgaaacttttgcagatgatggtgacgtggacattggaatgctagggagggatgccgaaacaaaaaaaataatcaaccttctgttgaacactgaagctaaggaggatatctcaatcatcccaattgttgggcttggtggactagggaagactaccttagcccaagcagtttttgcagacaaaagggtcaatgtctttgatttgcgaatctgggtctatgtttccaaggagtttgacctgctcaaaattgggaaggctatcatcagaggagcaaacagaagtatcaacctggacaactgcaacttgcagtttgtaaacaataatctgaaaaaagaacttgccaacagaagatacttgattgttctagatgatctctgggaagaatatggagaaaatttggaaaagttgaagcagatgttacaacatggcggaaagggtagcaagattatagcaactacacgtagtggaagcgtagtgcaagtactatacactggttatcttgcaaatgaacggaaagtatgtccggtgcctgagcctgatcatatcaatttgggtgttttatcaccttacgactgctggagcgtcatgaagcggagagtatttgggcctgatgatggccaaaatggcttagaggaaattggaaggcaaattgccgagaagtgtggaggactaccactggtggcaaatgctctcgggcaagtaatgtctgaacataggacggttgaggcatggacagatataagggatagaaagattgttttggatttcaaagcagatcatcagcaagacactatagagcgcctaatgttgagctattactatatgaagcgagaattcaaaatgtgctttacatatttggcagccttttcgaagggtttcgtcatggacactgatcgcttgatccagcaatggatagcccttggatacattgaagcacgagataatggtcaaaggtgtgtcaactatcttttgcggatgtcctttcttcagatttccaagtcttccatggttagtccaatgcacaccaaagctccacgcaagctcaccatgcatgatttagtgcatgatctcgcaacaataattgctcctgatgaattccttgtcatggacgctaccatgccaaatacatggagcaaagctaataataagcgttattgccgacatgcacagttggtcaactaccagaagcaacccaagtttttcaaagatctaccaagcaaggaacaaaaggtgtgcttgataaggcttggtccattaaagagtgtctaa</cdnaseq>

Protein Sequence

<aaseq>MSGIGGMIASSVANRVASRLSELVVEEATLLWRFKDDVDDMEEK MRDLEAVIQDVDGKARQGGKDGEAERRWLNKLKSVAYDVEDVLDELDAAQLIKNHQPK LKLFLSRNNPLLRKMTIARNMKNSREKIVSIKKDSIKLHHVHRELVAEGSRDNETFAD DGDVDIGMLGRDAETKKIINLLLNTEAKEDISIIPIVGLGGLGKTTLAQAVFADKRVN VFDLRIWVYVSKEFDLLKIGKAIIRGANRSINLDNCNLQFVNNNLKKELANRRYLIVL DDLWEEYGENLEKLKQMLQHGGKGSKIIATTRSGSVVQVLYTGYLANERKVCPVPEPD HINLGVLSPYDCWSVMKRRVFGPDDGQNGLEEIGRQIAEKCGGLPLVANALGQVMSEH RTVEAWTDIRDRKIVLDFKADHQQDTIERLMLSYYYMKREFKMCFTYLAAFSKGFVMD TDRLIQQWIALGYIEARDNGQRCVNYLLRMSFLQISKSSMVSPMHTKAPRKLTMHDLV HDLATIIAPDEFLVMDATMPNTWSKANNKRYCRHAQLVNYQKQPKFFKDLPSKEQKVC LIRLGPLKSV</aaseq>

Gene Sequence

<dnaseqindica>4171..4218#2916..3128#674..1837#69..374#atcttgcttctatttcacaaagccatattcctgttgatagagttcactgtgaatctgccataccatccatgagcgggattggagggatgattgcgagttccgtggcgaatcgggtcgccagcaggctcagcgagcttgtggtggaggaggccactctgctgtggagattcaaggacgacgtggacgacatggaggagaagatgagagatctggaggctgtgatacaagatgttgatggcaaagcacgccagggaggaaaagatggagaggcggaacggcggtggctcaacaaactcaagtccgtcgcctacgacgttgaggacgtgctggatgagctcgatgctgctcagctcatcaagaaccatcaacccaaggtactcacttccacttccacatattggtgttttgaataaaagttctatgattcatctttatggatcaatttacttgctgtacatgcctgactttcattgtggaatattttagcattgtgccaaaccaattaatttctaaaattaaaaagcaaagttgtcttttccactataaacacttctctagaagtttgctattagactgtcaattcccgttccataccagactatcagatactatcgtgggtatacaaaagaaaattaacatagcggatgatattgacttcatttttatttttcagctcaagttattcctttcccggaacaatccgcttctccggaagatgaccatagcccgcaacatgaagaactcgagggagaaaatagtctcaataaaaaaggatagcattaagcttcatcatgtgcatcgtgaactagtggcagaagggagtagagacaatgaaacttttgcagatgatggtgacgtggacattggaatgctagggagggatgccgaaacaaaaaaaataatcaaccttctgttgaacactgaagctaaggaggatatctcaatcatcccaattgttgggcttggtggactagggaagactaccttagcccaagcagtttttgcagacaaaagggtcaatgtctttgatttgcgaatctgggtctatgtttccaaggagtttgacctgctcaaaattgggaaggctatcatcagaggagcaaacagaagtatcaacctggacaactgcaacttgcagtttgtaaacaataatctgaaaaaagaacttgccaacagaagatacttgattgttctagatgatctctgggaagaatatggagaaaatttggaaaagttgaagcagatgttacaacatggcggaaagggtagcaagattatagcaactacacgtagtggaagcgtagtgcaagtactatacactggttatcttgcaaatgaacggaaagtatgtccggtgcctgagcctgatcatatcaatttgggtgttttatcaccttacgactgctggagcgtcatgaagcggagagtatttgggcctgatgatggccaaaatggcttagaggaaattggaaggcaaattgccgagaagtgtggaggactaccactggtggcaaatgctctcgggcaagtaatgtctgaacataggacggttgaggcatggacagatataagggatagaaagattgttttggatttcaaagcagatcatcagcaagacactatagagcgcctaatgttgagctattactatatgaagcgagaattcaaaatgtgctttacatatttggcagccttttcgaagggtttcgtcatggacactgatcgcttgatccagcaatggatagcccttggatacattgaagcacgagataatggtcaaaggtgtgtcaactatcttttgcggatgtcctttcttcagatttccaagtcttccatggtaagtatcatagaacacctttctacggttcatgtctggatattgatgcatcatatgctcactaggatatgctttgctagtaagataaatttatacatatgcttcctctagagtattaaccttaataagtaacataaataatttatgctagagtatcctaatccagtccaataatctttcttttcttgtagcttttaatttaaaacccacaagttaatgtttcaacatctgcattttcagttccaaattaaatacttatttttaaatttaatacgtttaaaatgatatattcaatacaatgcttcagtttgataggttacacaccttatttagtttagggtagtccattgtttttgtagatttacactacaaaagatatatttcattatatagacgaaatatctgttcatctcatcaaaataagtgcaacattgtttttttaattattccttttgcgcattttgtttctgctactttttgtggtgtgtgtttttttgccactctgtctggtttttcattatttgtctagtattcaaagttgagggtaaaaataagcagttccgtagtttagggcattcaaacctacaattagatcaaccatctaaatgcttgggttcatggctttatacaatttataccttaaaacaacttactaattctagaaataatttaaacagtgtgacttcattaaagataaggctgcatctaacctacaccttcgatcaaccatatgtagcctagaaataattaagatggtgtggttctgggggaagagagaattagcaatacacaacaattagttgagatcgactttataagatatatagattaatcactgctgctgaaattaattatacctactaattttgtgggatttacaatttatttttgaaaggaaatgtggcatctgctgatttaattaagaaggttagaaaaggtacataatgttgtagttcagttttggtagtaggcaatgaaaaagggaaaaaacaacttaagcagcttgtacatggcaaaacactatttacattgtattttgcagcaccgttttaaattttgatagtagctttccctgcaggttagtccaatgcacaccaaagctccacgcaagctcaccatgcatgatttagtgcatgatctcgcaacaataattgctcctgatgaattccttgtcatggacgctaccatgccaaatacatggagcaaagctaataataagcgttattgccgacatgcacagttggtcaactaccagaagcaacccaagtttttcaaagatctaccaagcaaggttagaaccattcattttagggagtgcattggatcgcaacttccccgaaaggcattctctgggtcaaagtatatacggatcttggacctgagcggatgttcgtctgaagggcaatctatccctgttagtatggcgttgccatcctccattcgtcaactgatgctgctagcttatcttgatgtctcaggcttgccaattgcagcacttcctaaatatttgcatatgtttcagaatatgcaaactctaattctatccaattgctctcttgaaaccttgcctgctaatattggtaacctacacaagctttgttatctagacttatcagggaatagtgacctcagtaaacttccgacatcatttggaaaccttctcaaactttctctcctcagcctatctgggtgtactaaacttgaagaattgcctgaatcaatccacaaccttaaatgcttagaacaactagacatgtcaggttgttgtgctcttcaaaatctccctgatgaatttggcagcctttctaagctctcatttgtaaacttgacaagttgttcaaagctaaccaaactaccaggcaattttaaccttgagtctcttgagcatctaatcctttcagattgccatgagctagaaaacctaccagaagattttgggattctttatagactagaggttttggacctgtctgattgctacaagattccagtgttaccagaatccttctgccaacttaaacatttgaaagacctcaatctttcagactgccatggcctcaaacaactccctgaatgcttcggggacctttctgagctccagtttttgaacctcacaagctgttctaagctacagtcattaccccaatcattatgcaacatatttaagttgaagcatctcaatttgtcatattgtataaggattgaacatcttccgtctttgtttggtgaccttcaacttcaagtcttgaaccttacttgttgttatagtctgcgagacatgccagatagtatcagcgacatggctagcctcacgctgcttgatgttatttcaggaacaaaaggtgtgcttgataaggcttggtccattaaagagtgtctaaatttacctggccgtgaagaacatgatgtacatgagatagaaaatggagagtgttgcagtatagtggagcttgggaaactaagttgtcgtgcactgggaattcaacatcttgaaaatgttgagcggctggacaatgcaagggaagctaagttgcgtgatatgactgaccttcgggaactaactttgtcatggggacttggtggcacgagaaatgtggacaaggatgaagaggtgcttgagaacctattacctcctcgaactcttgaaagttttatggtacatgtgcaaggatttccct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0937400, RefSeq:Os01g0937400