Os01g0937800

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0937800| Description = Peptidase A1, pepsin family protein| Version = NM_001185805.1 GI:297720744 GeneID:9266490| Length = 2664 bp| Defini...")
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Gene Name

Os01g0937800

Description

Peptidase A1, pepsin family protein

Version

NM_001185805.1 GI:297720744 GeneID:9266490

Length

2664 bp

Definition

Oryza sativa Japonica Group Os01g0937800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42969879..42972542

Sequence Coding Region

42969879..42970008,42971254..42972542

Expression

GEO Profiles:Os01g0937800

Genome Context

<gbrowseImage1> name=NC_008394:42969879..42972542 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42969879..42972542 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgctcatctccttcgtgtcgtcgagtcatggctgctgcgagcagcgcccctgttggattggggggggggcatccttcccgtgcagctcccggccagattctgcagacatcggcatgggcggaacctccattgtgtcactggttctgttgctatcatgcttggtggcgaccggtgatcagcatgcaacaccagcagcgtacaagctacccctaatcgtccctctcatcagggacaccaacacctccctctacacgatcgccatcaagaaagacgatgcccctctcgtcgtcgacctcgccggcgctctcgtctggtcgacgtgccggtcgtcgacgcacgccacggtgtcgtgcctgtccggcgcgtgcggcgcggccaaccagcagcagccgcgtcgctgccggtacgtcgacggcggctggttctggtccggccgcgaggcggggtcgcgctgcgcctgcaccgcccacccgttcaacccggtcaccggtgagtgctccaccggcgatctcaccagtttcgccatgtcggctaataccaccagcagcggcaccaaactgctgtgcccggaggcgttcgccaccgtcggcgcgtgcgcgccagagcggctgctggcgtcgctccccgccggcgccaccggcgtcgcggggttctcccggcggccgctctcgctgccgtcgcagctcgccgcgcagcgcagcttcggcaacaagttcgccctgtgcctccccggattcgccgcgttcggcgacacgccggtgtacatcgggacggagagtctaggcatcgtcaactacacggaaagcctcccgtacaccccgctcctgacgaacccaagaaaccccggctactacctccccgtcaaaggcatcacggtgagctggtacgggcgggacgtcccggcgtccctgccagccggcgcgctcgacatggacgcccgcacgggccgcggcggcgtcgtgctgagcaccacgacgccgtacgccgtcatgcggcccgacgtgttccgcgccttcgccgaggcgttcgacgccgccatacgaggaacggattacgccaaggtggtgcgcgtgccggcggtggagcccttcaagctgtgctacgacggcgcgttcccgttccggaagcggccgccgacgtgggacgttccgacgatcgacctggagctcgccggcgccacgggcatctggaggttgttcaccgagaactacatggtgcagacgccgcgcgggatgtgcgtggggatcctcgagatggaggccggcggcggcatgccggtggacggcgagccggcgatggtgctcgggctgaagcagctggacacgaaccttctggtgttcgacctcgacaagatgttgctgtggttcagcggggagctgtcctttcgcttgacgggctgtgtgtcgcccttttga</cdnaseq>

Protein Sequence

<aaseq>MLLISFVSSSHGCCEQRPCWIGGGASFPCSSRPDSADIGMGGTS IVSLVLLLSCLVATGDQHATPAAYKLPLIVPLIRDTNTSLYTIAIKKDDAPLVVDLAG ALVWSTCRSSTHATVSCLSGACGAANQQQPRRCRYVDGGWFWSGREAGSRCACTAHPF NPVTGECSTGDLTSFAMSANTTSSGTKLLCPEAFATVGACAPERLLASLPAGATGVAG FSRRPLSLPSQLAAQRSFGNKFALCLPGFAAFGDTPVYIGTESLGIVNYTESLPYTPL LTNPRNPGYYLPVKGITVSWYGRDVPASLPAGALDMDARTGRGGVVLSTTTPYAVMRP DVFRAFAEAFDAAIRGTDYAKVVRVPAVEPFKLCYDGAFPFRKRPPTWDVPTIDLELA GATGIWRLFTENYMVQTPRGMCVGILEMEAGGGMPVDGEPAMVLGLKQLDTNLLVFDL DKMLLWFSGELSFRLTGCVSPF</aaseq>

Gene Sequence

<dnaseqindica>1..130#1376..2664#atgctgctcatctccttcgtgtcgtcgagtcatggctgctgcgagcagcgcccctgttggattggggggggggcatccttcccgtgcagctcccggccagattctgcagacatcggcatgggcggaacctgtaggaagacagtgctccctacatgaatctgtaagtggcgcggctcatgttcgttggcgacgatggggtgacgaaggcttgggcagcagcagctacccgcctcagtggagtagaagggcattgcagcatcttggtgtggatttgcaacagagaccggaggagccaaccaccatcggagaggaggaagaaaccagatctagaccagtacattttcatgattttttatgttacagccaatatatttggatgtgtcttgggggttgaatctgtgatggatacttagatggtgtttcatatttctactttcgatttctttcatatttgtgatgtttcagcgggttgaagcttgacgtttcatccatgaaaacaaaatgtttcaatggtgtttcaactatgtttcacgatttttgtaggctgacaaattttctatttagtagtgaaacattttttttctagttgcagtgaaacatcgctcgatttttgcgctcactttgtagtcgccttcatgttttgtacttttgttgccccaaagcaaacatcctgctaggccagaaaagcttattttaggctccgtttgggaaactcaagattccgagaaactagtcggtgagaatttgtaaaaatcgggtttcttagccacttacccttgctgcactatataacgggagaaagtcgtcatataggatgtttctccatatttataaagtcctactctatataatctatctcttataatcgttcaatgtcagacaaccgtacgtgcccttgattagtgcttgctcggaccatgggtatgagatggtttcatcagggcataatccagcccaatgtttataacctaagactccagaaccgagccggattgtcttggatcgatccaaacgggcaattttcccttaccattgatctcgtgtgatgcgtaattgtgtactactgcagatagacatacagccagatccttaccagggttccctgacttaaaatccaaactgtgggtgctaatcaacagtgtacagtacagtactcgctcttatattcatttaaaaggccatcgtcaactccttgatatgcatgatggatcggtggcatcttgaccctacaaatattgaccaaaaactaattgaactactactcctgaagtagcagtacaaatacattcaactatgcccatttctgtcgccagccaatcaccttcccaatatatccatcagattttctgaatacacaacatgcctaacactccagccattgtgtcactggttctgttgctatcatgcttggtggcgaccggtgatcagcatgcaacaccagcagcgtacaagctacccctaatcgtccctctcatcagggacaccaacacctccctctacacgatcgccatcaagaaagacgatgcccctctcgtcgtcgacctcgccggcgctctcgtctggtcgacgtgccggtcgtcgacgcacgccacggtgtcgtgcctgtccggcgcgtgcggcgcggccaaccagcagcagccgcgtcgctgccggtacgtcgacggcggctggttctggtccggccgcgaggcggggtcgcgctgcgcctgcaccgcccacccgttcaacccggtcaccggtgagtgctccaccggcgatctcaccagtttcgccatgtcggctaataccaccagcagcggcaccaaactgctgtgcccggaggcgttcgccaccgtcggcgcgtgcgcgccagagcggctgctggcgtcgctccccgccggcgccaccggcgtcgcggggttctcccggcggccgctctcgctgccgtcgcagctcgccgcgcagcgcagcttcggcaacaagttcgccctgtgcctccccggattcgccgcgttcggcgacacgccggtgtacatcgggacggagagtctaggcatcgtcaactacacggaaagcctcccgtacaccccgctcctgacgaacccaagaaaccccggctactacctccccgtcaaaggcatcacggtgagctggtacgggcgggacgtcccggcgtccctgccagccggcgcgctcgacatggacgcccgcacgggccgcggcggcgtcgtgctgagcaccacgacgccgtacgccgtcatgcggcccgacgtgttccgcgccttcgccgaggcgttcgacgccgccatacgaggaacggattacgccaaggtggtgcgcgtgccggcggtggagcccttcaagctgtgctacgacggcgcgttcccgttccggaagcggccgccgacgtgggacgttccgacgatcgacctggagctcgccggcgccacgggcatctggaggttgttcaccgagaactacatggtgcagacgccgcgcgggatgtgcgtggggatcctcgagatggaggccggcggcggcatgccggtggacggcgagccggcgatggtgctcgggctgaagcagctggacacgaaccttctggtgttcgacctcgacaagatgttgctgtggttcagcggggagctgtcctttcgcttgacgggctgtgtgtcgcccttttga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0937800, RefSeq:Os01g0937800