Os01g0938600

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0938600| Description = Conserved hypothetical protein| Version = NM_001051877.1 GI:115442124 GeneID:4326504| Length = 4845 bp| Definition ...")
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Gene Name

Os01g0938600

Description

Conserved hypothetical protein

Version

NM_001051877.1 GI:115442124 GeneID:4326504

Length

4845 bp

Definition

Oryza sativa Japonica Group Os01g0938600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42998696..43003540

Sequence Coding Region

42999175..42999257,43000049..43000733,43001449..43001817,43001893..43002002,43003027..43003321

Expression

GEO Profiles:Os01g0938600

Genome Context

<gbrowseImage1> name=NC_008394:42998696..43003540 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:42998696..43003540 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaaggaggccgtcggcgaggggcagcaccagcagcagcgcccgccggatggggcagggggcggaggaggcggaagaggaggaagaggaggaggaggaggaaggggaggtagcgggcgactggggtggtggtggtgctgctgctgcggtgtcggtggggtggtgcggctgaaatgcgtggcggcgctcgtgctcggcgtcgccgtgctgctgtcggcggtgttctggctcccgccgttcgcgcggcgcgggaggggatcggagggcccggatccgggcgccggcttcgatgctgatatagtggcaagctttaggctgcacaagatggttcctgagctgaatggaaatgcatcaaagcttgaattggacatttatgaggaaatcggcattcctaactccactgtggtagtaaattcactacaattagttggatcaaactggacaaatgttatcttcagcattgtgccttatccaaagaatttgactttatcgtcaacagggctgagcattcttaggtcttattttatgtcctttgtcgtgcggcagtcgacactccagttaaccgagtccttatttggaaattcatcgtcctttgaagtgcttaaattcccaggaggaattacaatcattccgccacaaactgctttccttcctcagaaacctcatgcaacttttaacttcactcttaatttcccaatctacaaagtgcaagacagaatcgatgagctaaaggatcaaatgaaaactgggttactgctcaattcctatgagaatctgtatatcaagttggcgaatttgaatggttcaacggttgaccctccaactattgttgagacctccatttttcttgaagttgggaatcaccagccatctgtaccaaggatgaagcagttggcacaaacaattactaattcatcttcaggaaacctgggtctgaaccataccgtatttggcagggtgaagcagataagcctttcatcctatcttagacattctttacatagtgggggtggttctgaagcacctagtccagcacccatgcaccatcatggtcaccatcaccatcatcaccatcaccatggtcatgaagacagcaggcattcggctccggctcaggctccagtacattaccctgtgcatgaacccagatatggagctccacctccatctcggtgtccatatggtactgacaagccaaagaataaagctcatgtaatgccagctcctgagcctacagccaatggccatcattttgcttcaccagttgctttgccacctcactcactgtcaccacggaatcccaatgtgcacagtaggtcccctattccatcccctccagttcttccagaaccacctttgcccactgtttcttttgctcatgctcatcctccaagtgaacatacatcaagaagagatcctgctggattgtcggctctggcccctgcacctcattcatcaaacgctactcggagcctgtggcgttccattcattgggccaacattgtgcctcttgtgtgtattctaatgagcctactatga</cdnaseq>

Protein Sequence

<aaseq>MGKEAVGEGQHQQQRPPDGAGGGGGGRGGRGGGGGRGGSGRLGW WWCCCCGVGGVVRLKCVAALVLGVAVLLSAVFWLPPFARRGRGSEGPDPGAGFDADIV ASFRLHKMVPELNGNASKLELDIYEEIGIPNSTVVVNSLQLVGSNWTNVIFSIVPYPK NLTLSSTGLSILRSYFMSFVVRQSTLQLTESLFGNSSSFEVLKFPGGITIIPPQTAFL PQKPHATFNFTLNFPIYKVQDRIDELKDQMKTGLLLNSYENLYIKLANLNGSTVDPPT IVETSIFLEVGNHQPSVPRMKQLAQTITNSSSGNLGLNHTVFGRVKQISLSSYLRHSL HSGGGSEAPSPAPMHHHGHHHHHHHHHGHEDSRHSAPAQAPVHYPVHEPRYGAPPPSR CPYGTDKPKNKAHVMPAPEPTANGHHFASPVALPPHSLSPRNPNVHSRSPIPSPPVLP EPPLPTVSFAHAHPPSEHTSRRDPAGLSALAPAPHSSNATRSLWRSIHWANIVPLVCI LMSLL</aaseq>

Gene Sequence

<dnaseqindica>4284..4366#2808..3492#1724..2092#1539..1648#220..514#gcggtgcggtttacctctcactttctctcaccttccctcgcccacctcaatctcctcctccttaagcaacgacgccgcagcagcggaggaccaccaccaccaccacccagccctagctccaccaaccggatcgccccccccccccccagcaatggcgtccaaggaggcggaggcggcggctgcctggcgccgggatgcgtcgtggtgagatcgcgccgcatggggaaggaggccgtcggcgaggggcagcaccagcagcagcgcccgccggatggggcagggggcggaggaggcggaagaggaggaagaggaggaggaggaggaaggggaggtagcgggcgactggggtggtggtggtgctgctgctgcggtgtcggtggggtggtgcggctgaaatgcgtggcggcgctcgtgctcggcgtcgccgtgctgctgtcggcggtgttctggctcccgccgttcgcgcggcgcgggaggggatcggagggcccggatccgggcgccggcttcgatggtgagagccccgcattgccgagatctctcgccttgctcgcttttgattccgtttcgtttccgttgcgtctggttgcaatgcccccccgacgagcggaatctgcggttcgatttctgattagctcgtggcggattcatgagtaggcagtgtttctgaggtttggatctggatgtacggaaatttgaactgactgtggcgaccctggtcaatgcgatttatgtttcgttcgatttggatgcgagacggattaatttagccttagcgtagccattctatcagaggataccatgcaaatttcctcgcgtatagctgttttctgctagatttgatgtcggtatttgatctgtattgcgttagccatgtgtcggtgcttgttttgcacaatgagtaagttagaatttaatgctaaaagtggcaactccgtcactctcagcttgtggttccatacaattaccgaatttggtgagctgtgacccaactattttgtgagaattgcacatctgtgtaggaggttctgtcactgatatttgtgttgttggttcccatttccctttttgcatttttcaaaggtttgcaatggctttattgaaatgctgaagttgaaccgtagtaaattactagccaataattcaggttgcagtccattccatatttattacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgttatatgcctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataacctgaaacggaggtagtaattgtctaatgtggaaaagcctgtttggcatttactgtttactgaaattgcacttttggaatggtttgcagaacttttaatctttatttcggtcattctgcagtacaaatataatgttctttattctgttgtgtagaagtactggaagtctagaattgcacaatacatgtcaatccttctaagcactttattttaagacgcgtgtcttacgaaccgatatttttttcttccagctgatatagtggcaagctttaggctgcacaagatggttcctgagctgaatggaaatgcatcaaagcttgaattggacatttatgaggaaatcggcattcctaactccactgtatggcctgcagacatcttttatttatacatttctttcatcacgtcacaatctgatgtttgaatacttatacaggtggtagtaaattcactacaattagttggatcaaactggacaaatgttatcttcagcattgtgccttatccaaagaatttgactttatcgtcaacagggctgagcattcttaggtcttattttatgtcctttgtcgtgcggcagtcgacactccagttaaccgagtccttatttggaaattcatcgtcctttgaagtgcttaaattcccaggaggaattacaatcattccgccacaaactgctttccttcctcagaaacctcatgcaacttttaacttcactcttaatttcccaatctacaaagtgcaagacagaatcgatgagctaaaggatcaaatgaaaactgggttactgctcaattcctatgaggttagtggtaccttctggcttaactcattttatattaccttcattgtagttattaagttatatggtaatgtgattatactaatgaattctgttcattttatgtcgcctcctttgaagtttccttcatttttaaatatgttagttttagatatttgtttaatttaggcactttctcatgtgacatgatgtacacacacaatcctgtagacatagcatgctttgctgcatttcttcctcatgatttctggtgctactgaacaatcttggttcaggggtgcgcgcacaaagttaggtccgtaagcatgagagagcacacagtgcttgaacaggtgattttgaggatatgctcttgatttaaaatttttcatgaagccacatggaaaaggggtgcaagattagcatagccaacccaaggaagtctctgtttatctgtctacagtctcatcatacttgaatttataccattttctgctttataaatacatgtgtccatttcattttcattttattctatgtacatacaaataacggatgatgcttttgatatagtctgctaagaactatctgtaaagaaaggggctggtatttttaatccatcatatgaatttctattggtggatcttacattttgttgtgaaaaagttgattagtgtatattgtatcattgccttctttttattcttggcttaaacttatattattgtgtgcattgtagaatctgtatatcaagttggcgaatttgaatggttcaacggttgaccctccaactattgttgagacctccatttttcttgaagttgggaatcaccagccatctgtaccaaggatgaagcagttggcacaaacaattactaattcatcttcaggaaacctgggtctgaaccataccgtatttggcagggtgaagcagataagcctttcatcctatcttagacattctttacatagtgggggtggttctgaagcacctagtccagcacccatgcaccatcatggtcaccatcaccatcatcaccatcaccatggtcatgaagacagcaggcattcggctccggctcaggctccagtacattaccctgtgcatgaacccagatatggagctccacctccatctcggtgtccatatggtactgacaagccaaagaataaagctcatgtaatgccagctcctgagcctacagccaatggccatcattttgcttcaccagttgctttgccacctcactcactgtcaccacggaatcccaatgtgcacagtaggtcccctattccatcccctccagttcttccagaaccacctttgcccactgtttcttttgctcatgctcatcctccaagtgaacatacatcaagaagagatcctgctggattgtcggctctggcccctgcacctcattcatgtaagttttttgccttatctttttaagattctctcaactgctaatgagtgttatctctaagaggaattcattcgttcactttagaatgtcggaaaagaatactataggattcttgtagtactaattatatccagctggacaatttggacttctgttttttacttgctgtttctgctcctgaggctaatacggtaaatccattttgtttgatctttacgctgattgctgaatcgaggttgcatttctgtgaagtccagatcaggcttgagtttgcctatctgctgatggtacctcagctaaatggagttttagttcagctcacaattgattgagataaacattcataggttttcttctgggcaaacaagtacctccatcttagaaagcatagttttgtaatccttgggatctagttgccttggatggcaaaatatttgtgagccaagagaaaagctcagttacgctagatagtgtacgccaaggtgaaaagtcaaaatcaaacaagttattttggatgggataagaaatttcctctgctaaattttatatagttgtgttttaacattaatcgttaccatgtcttttatggctcgtgctcatatttcagtttatgtttgatttatatctgtatctgatttatgcaatcatttgagaacagtgcattactcaattgcatcatgaatttacaagacagtaaaaacgctattgatgaatctatgcttatagagttataatctgtttacctcatgtatcagctttcattttttttaccattcattctgctgttgcagcaaacgctactcggagcctgtggcgttccattcattgggccaacattgtgcctcttgtgtgtattctaatgagcctactatgacgaagaaacacgcggctagacagatgtaaattagggaggtttcaagaggtgatgaggcaccacctgttcttcttgtctggctgtagccggccgatcagctcccgggccggcgggcaagcacaatacagcgtcccacacggcctcggcgtgctgttatacttcttgttagtgcatgtaaatatggatgggggggggggggggtggggtataaggcaaatgggcagcagctgtgcctaggtcaaagccacggtggtggcaggcccttgtctagcacttgttgcccgggttttgctatgtactactgctgttgagaagaggatcttcaagtgtaaaaaccacttcttttttctttttaatatgagaggggcatagaatctacctccaattttcagaggtctattttgggactatgctctggagcatctgtcttgttgaacctatagtttctcataattttttgagggctttcctcttgaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0938600, RefSeq:Os01g0938600