Os01g0940100

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0940100| Description = Similar to Hexokinase| Version = NM_001051889.1 GI:115442148 GeneID:4326516| Length = 5418 bp| Definition = Oryza s...")
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Gene Name

Os01g0940100

Description

Similar to Hexokinase

Version

NM_001051889.1 GI:115442148 GeneID:4326516

Length

5418 bp

Definition

Oryza sativa Japonica Group Os01g0940100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43100565..43105982

Sequence Coding Region

43100672..43101046,43101136..43101217,43101338..43101465,43101547..43101645,43101767..43101922
,43103197..43103271,43105824..43105982

Expression

GEO Profiles:Os01g0940100

Genome Context

<gbrowseImage1> name=NC_008394:43100565..43105982 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43100565..43105982 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aactttgttgccctggcactaaagaattttcttgaaggagaagatgaccaagatggaaaaatggcacttggttttacattttctttccctgttagacaaatttcagtgtcttcagggtcattaattaggtggacaaaaggattttccatcagagacacggttggcagagatgttgctcagtgcttaaatgaagcgcttgccaattgtgggctaaatgtgcgggtcactgcattggtgaatgatacagtggggacattagctctagggcattactatgatgaagacacagtggctgctgtgataattgggtctggcaccaacgcttgctacattgaacgcactgatgcaattatcaagtgccagggtcttctaacgaactctggaggcatggtagtaaacatggagtgggggaatttctggtcatcacatttgccaaggacgccatatgacatcttgctggatgatgaaacacacaatcgcaatgatcagggctttgagaaaatgatatcaggaatgtatcttggggaaattgcaagattggtatttcatagaatggcccaggaatcagatgtttttggtgatgctgctgatagtctatccaaccctttcattttgagcacaccgtttctggccgcaattcgcgaggacgattcaccagatctgagcgaagtcagaaggatacttcgagaacatctgaagattcccgatgctcctctgaaaactcgacggctggtcgtgaaagtctgcgacattgtgactcgcagagccgcccgtctagccgctgcaggcatcgtggggatactgaagaagctggggagggatgggagcggcgcggcgtcgagcgggagaggtagagggcagccgaggaggacggtggtggcgatcgagggcgggctgtaccagggttacccggtgttcagggagtacctggacgaggccctggtggagatcctgggggaggaggtggcgcggaacgtgacgctgagggtgacggaggatgggtcgggggtcggggctgccctcctcgccgccgtacattcgtcgaatagacagcaacaaggaggtcccatatag</cdnaseq>

Protein Sequence

<aaseq>NFVALALKNFLEGEDDQDGKMALGFTFSFPVRQISVSSGSLIRW TKGFSIRDTVGRDVAQCLNEALANCGLNVRVTALVNDTVGTLALGHYYDEDTVAAVII GSGTNACYIERTDAIIKCQGLLTNSGGMVVNMEWGNFWSSHLPRTPYDILLDDETHNR NDQGFEKMISGMYLGEIARLVFHRMAQESDVFGDAADSLSNPFILSTPFLAAIREDDS PDLSEVRRILREHLKIPDAPLKTRRLVVKVCDIVTRRAARLAAAGIVGILKKLGRDGS GAASSGRGRGQPRRTVVAIEGGLYQGYPVFREYLDEALVEILGEEVARNVTLRVTEDG SGVGAALLAAVHSSNRQQQGGPI</aaseq>

Gene Sequence

<dnaseqindica>4937..5311#4766..4847#4518..4645#4338..4436#4061..4216#2712..2786#1..159#aactttgttgccctggcactaaagaattttcttgaaggagaagatgaccaagatggaaaaatggcacttggttttacattttctttccctgttagacaaatttcagtgtcttcagggtcattaattaggtggacaaaaggattttccatcagagacacggtatggcaaaattttttccttgctagttatcatatggttcagtttaatttccacattgatgtagttgtatataacctacacagctagtggttttggtaaatattgtaaatttttctatggttcaaggtgaatgcataactagctaccacttttttgactatcttgtgttactacatgaaagaatatatacttgttacctactagaaatttgtaatgatgagtcctatttctgtttgtgttatgggttaggattcatagggggtaaacaccgccgggaggatagccgggcggcgacggctgctagggatgagagggggacttaggttgggagagactaaccttgattcattgcttaattagaatgatgatacaaaccatccttatatagatggagggaggacccagtctaatcctatccaaccaactctatccttatccctagggcctcgacccctcggcccactacctatgacactacatccctcctttcgagcagctcgccctcgagctgcagcacaatttagctgacccaaacgactccctaaataaagccttatatgacttaagccttttacatctcggcttattactttatggcaaactgaaattgaaaggataaataaatcaaagattatgatgcaccaccatgctatctcgccgacatcagatgtaggtggaccccatcccaaagctttgagagaaaggataagtccatagcacgttgcaagcttgattgcacatctaatctgttttccaaggtggtttgtagatggcacattcagattagctccaccggaccagcacaacagccatggtgccaacatttctagcccacactgactgcctaaggcccaaggcatagttgaaggcccttgtgttgtaatttgtggaccagcccactggcccaagagccaccaagatggcttgatcgatctgctgatcccaccaggacgtgaaatcttatccactgaatgcaacgctgccggtagttggagccgcgcttccgccgctcgtgggctgcgcaactgctgcgtcgtctcccacgcctccgcgcgcgacgcccgccgagaatcaagggccacgccgcacttccccaactgccgcgcgcacgaatcgcgctgttgtgcgcgccgcgttgccaggagcccgcgccaatgcgcctgccgccttgccgctcgcttcccaaaaaaaaaaccagcccgcgtcttcgtggcagccggaatcgccgtcttcgcctccgatgaccccagcagcggcggcgccagcgccatagccaactgcatgggcgagggctacccgaaaatggcccctgctcctgccaacaaggatcccccggccgccttgcttcagggaaggttgtcccagaggaagcaggtgcagctgccctcggccgcgcaccacgccgcgcgccatggcttgccctgcaccctgacgacctgcctgaattacgcttcttgaatacatgctgtcgtgggcgcatggatgatagatgatggcacgacacaatagcctccattggggagggctgagaggatggagccgcggccagcgacggcattgctgtgcccaccaccgccgtctgcagattgcacttctcttccttctcgattggcgcatgctccgtcctcattgaggctgcaagtaccgccaggtcgacctgcatccttttgaggatccggatgcacatgtctctaggatctttgatcatatcttcaacaaccatggctctgataccaagttgttatgggttaggatccatagggggtaaacaccgccgagaggatagccgggcggcgacggctgctagggatgagaggaggacttaggctgggagagactaatcttgattcattgcttaattagaatgatgatacaaaccatccttatatagatggagggaggacccagtctaatcctatccaaccaactctatccttatccctagggcctcgacccctcggcccactacctatgacagtctgttggatatttgttgtggttgcataaacagggagcatatcctatgcacacaggccctcgcgtgtacacaccgtgtacaccaactaaaaattatcacaaaaaattttaggaaaattcatacatgtactttcaatagtattacatctacgtgcaaagtcgcatcttcaaattcattctacatagagaataacaaaaaagataaaattctgacaaaattgcaaccttaaaactgtcagattttttgtttattttgttacggctaaaatataatgaatttgacgttaagattttaaccctaggtgtaatacaattgaaagtatgtgtatgattttttctagtttttttggtgacattttttagttggtgtgcccgtgtgtacacgtgagggcctgtgtgcataggatatgttgctgcataaacatgcatgtgtagccgtttccctcaacttcctaactaaattatatttttatttgaaggaaacacatattgctttgctttattttctgatttcttctttgcttcgatctgacatactgattttgaaactgctactgtgaataatggaatcttaggttggcagagatgttgctcagtgcttaaatgaagcgcttgccaattgtgggctaaatgtgcgggtcactgcattggtaagtcttttgcaaccgtttttttggtgggtgtaactctgttacatttataccattgaatacattttcttggcttgaaagtactgttatagtgcttgttcactactagtgtggagcttagatacatacttcctccgtttcatattataagactttctagcattgcccacattcatatactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgctaatgaatctagacatatatacctatctagattcattagtatcaatatgaatgtattcattaatatcaatatgaatgtgggaaattctagaatgacttacattgtgaaacggagggagtatatgttaatgaatctagacatatatgtgtgtctagattcattaatatctatatgaatgtgggcaatgctagaaagtcttataacctttttttttgatctcaagtcttgtaacctgaaacagaggtagtagtcaataagaaatgcattcaaaagatgacgcttgccatcgaggaatttgaaatgaaaaatccgaagggtgaccctctagttcttctgtcggggttggtctagctgtgacagcctttctttcccagtgttcagttcatagttatgaatttgcttgtagagtgcaagcagtgttctagataagggaacagagctggtaaataaagtaaaaacggatgtacacagatatatactgatcatgtgtgtatcagtaatactccctccgtcccaaaataagtgcagccatggttttccacgcccaactttgaccgttcgtcttatttgaatttttttttaaaaaaattaaaaacataagtcacgagtaaagtactattcatgttttatcatctcataacaacaaaaatgttaattataaattttttttaaataagacggacgatcgaagttgggcgcggaaactcatggctgcacttattttgggacggaggtagtagcatttttttggggtagtgaccagcttcagagatgcttgttatcagcatgttatgttcaaaacacagaataatccttgctgctagaaaccttcactcaaatcaagaggacaatgccatgattataggggtagtgcagtaatagtattggtgtcatggcctgatactatacccttgttctgtttgggatggctgctggtgtttggcccaatgaagtataatgccattgtgttatatttttattatattttgttgaggagtgccttttaaatgattattcttttatgctactttgtacttaggtgaatgatacagtggggacattagctctagggcattactatgatgaagacacagtggctgctgtgataattgggtctggcaccaacgcttgctacattgaacgcactgatgcaattatcaagtgccagggtcttctaacgaactctggaggcatggtatcttattttctcctttatctgtagtcagttcaatttccttgtcaaatgctcatcagcttatgtggagtaaaggaattatgatgcccatgtgcgtaccctaaaacatttcgttaatcaggtagtaaacatggagtgggggaatttctggtcatcacatttgccaaggacgccatatgacatcttgctggatgatgaaacacacaatcgcaatgatcaggtagcaacctgggtaaaattcaattattctggtatcttgtgttgtggtttagactgaacactttgtactaccatgattcagggctttgagaaaatgatatcaggaatgtatcttggggaaattgcaagattggtatttcatagaatggcccaggaatcagatgtttttggtgatgctgctgatagtctatccaaccctttcattttgaggtatgtccggatgtcaaattctactgatgtttgtttcgtacctggtgtatttctgcataaacacaattagtaaaaagaagttgttctatgtgttgtctgatttcaattttgcaaatccagcacaccgtttctggccgcaattcgcgaggacgattcaccagatctgagcgaagtcagaaggatacttcgagaacatctgaaggttagctcagaattattccagccatttcatcgggcaccattcttttttccattccatccatctagttgtctgatgattctctcttccagattcccgatgctcctctgaaaactcgacggctggtcgtgaaagtctgcgacattgtgactcgcagagccgcccgtctagccgctgcaggcatcgtggggatactgaagaagctggggagggatgggagcggcgcggcgtcgagcgggagaggtagagggcagccgaggaggacggtggtggcgatcgagggcgggctgtaccagggttacccggtgttcagggagtacctggacgaggccctggtggagatcctgggggaggaggtggcgcggaacgtgacgctgagggtgacggaggatgggtcgggggtcggggctgccctcctcgccgccgtacattcgtcgaatagacagcaacaaggaggtcccatatagtgagagagacaatgaagatacagctagcccctcttgttcaaatgtaaaaaagggacattgtttgatatctatattcatatatataaaaatctgggtcttgtgcagag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0940100, RefSeq:Os01g0940100