Os01g0940800

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Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0940800| Description = Similar to Beta-1,3-glucanase precursor| Version = NM_001051892.1 GI:115442154 GeneID:4326519| Length = 1388 bp| De...")
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Gene Name

Os01g0940800

Description

Similar to Beta-1,3-glucanase precursor

Version

NM_001051892.1 GI:115442154 GeneID:4326519

Length

1388 bp

Definition

Oryza sativa Japonica Group Os01g0940800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43144578..43145965

Sequence Coding Region

43144606..43144669,43144814..43145748

Expression

GEO Profiles:Os01g0940800

Genome Context

<gbrowseImage1> name=NC_008394:43144578..43145965 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43144578..43145965 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgactacgcaaggatttgctcccgtgcttgcagtagcattgctccttgcagcatttcctgcagcggttcagtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagcgacgtcgtgaagctctacaagtccaaggggatcgactccatgcgcatctacttcccgaggagcgacatcctccaggcactcaccggctcgaacatcgccctcaccatggacgtcgccaacgagaacctcgccgcgttcgccgccgacgccaccgccgcggccgcctgggtcaagcagaacgtccaggcctacccgggcgtctccttccgctacatcgccgtcggcaacgaggtcaccggcgacgacacgggcaacatcctcccggccatgaagaacctcaacgccgcgctcgccgcggccggcctcggcggcgtcggggtgtcgacgtcggtgtcccagggcgtgatcgccaactcctacccgccttccaacggcgtcttcaacgacgactacatgtttgacatcgtggagtacctggcgagcaccggagcgccgctgctggttaacgtgtacccctacttcgcctacgtcggcgacacgaaagacatcagcctcaactacgccacgttccagccgggcacgacggtgacggacgacggcagcgggctgatctacacgagcctcttcgacgcgatggtggattccgtctacgccgcgctggaggacgccggcgcgccggacgtcggcgtggtggtgtcggagaccgggtggccgtcggccggtgggttcggggccagcgtgagcaacgcgcagacgtacaaccagaagcttatcagccatgtccaaggaggcactccgaagagaccaggggtggcgttggagacgtacgtgttcgccatgttcaacgagaaccagaagaccggggctgagaccgagaggcacttcgggctgttcaaccccaacaagtcgccgtcctacaaaattagattccactag</cdnaseq>

Protein Sequence

<aaseq>MTTQGFAPVLAVALLLAAFPAAVQSIGVCYGVIGNNLPAASDVV KLYKSKGIDSMRIYFPRSDILQALTGSNIALTMDVANENLAAFAADATAAAAWVKQNV QAYPGVSFRYIAVGNEVTGDDTGNILPAMKNLNAALAAAGLGGVGVSTSVSQGVIANS YPPSNGVFNDDYMFDIVEYLASTGAPLLVNVYPYFAYVGDTKDISLNYATFQPGTTVT DDGSGLIYTSLFDAMVDSVYAALEDAGAPDVGVVVSETGWPSAGGFGASVSNAQTYNQ KLISHVQGGTPKRPGVALETYVFAMFNENQKTGAETERHFGLFNPNKSPSYKIRFH</aaseq>

Gene Sequence

<dnaseqindica>29..92#237..1171#acttgcagcagctgcaaaataagcgaagatgactacgcaaggatttgctcccgtgcttgcagtagcattgctccttgcagcatttcctgcaggtatactgcagcatatagtacatgcatgttattcagcagcgtgcgagtacagagcatgtgtgctccacataataattaagtgtactaattaactaactcttggttcatgttacatgtacgcttgctctgttgacaaattaacagcggttcagtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagcgacgtcgtgaagctctacaagtccaaggggatcgactccatgcgcatctacttcccgaggagcgacatcctccaggcactcaccggctcgaacatcgccctcaccatggacgtcgccaacgagaacctcgccgcgttcgccgccgacgccaccgccgcggccgcctgggtcaagcagaacgtccaggcctacccgggcgtctccttccgctacatcgccgtcggcaacgaggtcaccggcgacgacacgggcaacatcctcccggccatgaagaacctcaacgccgcgctcgccgcggccggcctcggcggcgtcggggtgtcgacgtcggtgtcccagggcgtgatcgccaactcctacccgccttccaacggcgtcttcaacgacgactacatgtttgacatcgtggagtacctggcgagcaccggagcgccgctgctggttaacgtgtacccctacttcgcctacgtcggcgacacgaaagacatcagcctcaactacgccacgttccagccgggcacgacggtgacggacgacggcagcgggctgatctacacgagcctcttcgacgcgatggtggattccgtctacgccgcgctggaggacgccggcgcgccggacgtcggcgtggtggtgtcggagaccgggtggccgtcggccggtgggttcggggccagcgtgagcaacgcgcagacgtacaaccagaagcttatcagccatgtccaaggaggcactccgaagagaccaggggtggcgttggagacgtacgtgttcgccatgttcaacgagaaccagaagaccggggctgagaccgagaggcacttcgggctgttcaaccccaacaagtcgccgtcctacaaaattagattccactagacaagagtgatatactaatattacatttggatttggaataagctagctgctcatgtcaaatgcaaaaccgcatgcatgcatgggaacgtacggccagcatatagttttgtggtaataagcacagctgctcaagattcagcaacgtacgtgtaactctgccttggcactttggcagtgaatactgaacaataacggaatttataactctgtttccttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0940800, RefSeq:Os01g0940800