Os01g0941400

From RiceWiki
Revision as of 05:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0941400| Description = Similar to Beta-1,3-glucanase precursor| Version = NM_001051894.1 GI:115442158 GeneID:4326050| Length = 1180 bp| De...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0941400

Description

Similar to Beta-1,3-glucanase precursor

Version

NM_001051894.1 GI:115442158 GeneID:4326050

Length

1180 bp

Definition

Oryza sativa Japonica Group Os01g0941400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43165562..43166741

Sequence Coding Region

43165562..43165634,43165801..43166741

Expression

GEO Profiles:Os01g0941400

Genome Context

<gbrowseImage1> name=NC_008394:43165562..43166741 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43165562..43166741 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaaagcatggtgttgctttcattttaacactggcattggtccttggagtacttgcggtcactcctaaagtggtgcaatccattggcgtgtgctacggcgtgaacggcaacaacctgccgtcgccgagcgacgtcgtgaagctctaccagtcgaaggggatcgactccatgcgcatctacttcccgaggagcgacatcctccaggcactaaccggctcaaacatcgccctcaccatgggcgtcgccaacgagaacctctccgcgttcgcctccgacccctccgccgtggccaattgggtcaagcagaacgtccaggtctacccgggcgtcaacttccgctacatcgccgtcggcaacgaggttgagagcggcaacacgcagaacgtcctcccggccatgcagaacatgaacagcgcgctctccgctgccggcctcagcaacatcaaggtgtccgtgtcggtgtcccagaagggcgtgctcgccgggtacccgccgtccaatggcatgttctcccccgaagcgacctcgtacatgacgcccatcgcgaagtacctggcgagcaccggcgcgccgctgatggccaacgtctacccctacttcgcctacgtgggcaacctgcgggcccagatcgacgacatcaactacgcgctcttcacgtcgccgggcacggtggtgccggacggcagcaaggcttaccagaaccagttcgacgccatcgtcgacacgttctactccgcgctggagagcgccggcgccgggagcgtcccgatcgtggtgtcggagagcgggtggccgtcggccggcggcacggcggcgagcgccagcaacgcgcagacgtacaaccagaacctgatcaaacacgtcgggcaggggacgcccaagagggccgggagaatcgagacctacattttcgccatgttcaacgagaacgacaagagaggcgacgagacggagaggcacttcggcctcttcaaccctgatcagtcgccggcctacaccattaatttctaa</cdnaseq>

Protein Sequence

<aaseq>MAKHGVAFILTLALVLGVLAVTPKVVQSIGVCYGVNGNNLPSPS DVVKLYQSKGIDSMRIYFPRSDILQALTGSNIALTMGVANENLSAFASDPSAVANWVK QNVQVYPGVNFRYIAVGNEVESGNTQNVLPAMQNMNSALSAAGLSNIKVSVSVSQKGV LAGYPPSNGMFSPEATSYMTPIAKYLASTGAPLMANVYPYFAYVGNLRAQIDDINYAL FTSPGTVVPDGSKAYQNQFDAIVDTFYSALESAGAGSVPIVVSESGWPSAGGTAASAS NAQTYNQNLIKHVGQGTPKRAGRIETYIFAMFNENDKRGDETERHFGLFNPDQSPAYT INF</aaseq>

Gene Sequence

<dnaseqindica>1..73#240..1180#atggcaaagcatggtgttgctttcattttaacactggcattggtccttggagtacttgcggtcactcctaaaggtaagtatatatatcacgtgtattagggcctacaccctccattcccaataagaagcaactttcatggatgaatttggataaatagctgtccattcgtttatagaagttgtttttaagagttaggagtgcgtgtaacgtatatattgttcgttctactaatcaacagtggtgcaatccattggcgtgtgctacggcgtgaacggcaacaacctgccgtcgccgagcgacgtcgtgaagctctaccagtcgaaggggatcgactccatgcgcatctacttcccgaggagcgacatcctccaggcactaaccggctcaaacatcgccctcaccatgggcgtcgccaacgagaacctctccgcgttcgcctccgacccctccgccgtggccaattgggtcaagcagaacgtccaggtctacccgggcgtcaacttccgctacatcgccgtcggcaacgaggttgagagcggcaacacgcagaacgtcctcccggccatgcagaacatgaacagcgcgctctccgctgccggcctcagcaacatcaaggtgtccgtgtcggtgtcccagaagggcgtgctcgccgggtacccgccgtccaatggcatgttctcccccgaagcgacctcgtacatgacgcccatcgcgaagtacctggcgagcaccggcgcgccgctgatggccaacgtctacccctacttcgcctacgtgggcaacctgcgggcccagatcgacgacatcaactacgcgctcttcacgtcgccgggcacggtggtgccggacggcagcaaggcttaccagaaccagttcgacgccatcgtcgacacgttctactccgcgctggagagcgccggcgccgggagcgtcccgatcgtggtgtcggagagcgggtggccgtcggccggcggcacggcggcgagcgccagcaacgcgcagacgtacaaccagaacctgatcaaacacgtcgggcaggggacgcccaagagggccgggagaatcgagacctacattttcgccatgttcaacgagaacgacaagagaggcgacgagacggagaggcacttcggcctcttcaaccctgatcagtcgccggcctacaccattaatttctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0941400, RefSeq:Os01g0941400