Os01g0945600

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Revision as of 05:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0945600| Description = Amino acid/polyamine transporter I family protein| Version = NM_001051913.2 GI:297598308 GeneID:4325824| Length = 26...")
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Gene Name

Os01g0945600

Description

Amino acid/polyamine transporter I family protein

Version

NM_001051913.2 GI:297598308 GeneID:4325824

Length

2616 bp

Definition

Oryza sativa Japonica Group Os01g0945600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43358861..43361476

Sequence Coding Region

43359870..43360412,43360840..43360858,43360965..43361225,43361331..43361434

Expression

GEO Profiles:Os01g0945600

Genome Context

<gbrowseImage1> name=NC_008394:43358861..43361476 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43358861..43361476 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctcgctccggcgtggtggccatggacgccgccggcgccgatgcagaccaagcccggctgcaccagctgggctacaggcaagagctcaagcgtggcctctcccttgtttccaacttcgccttctccttctccatcatctccgtgctgacgggcgtcacgacgacgtacggcacggggctgcgctacggcgggccagtgtccatgacgctgggttggctggtggtgtccgccttcaacggctgcgtcgccctgtccatggccgagatctgctccgcctacccgacctccggtggcctctactactggagcgccaagctggccggcaaggaatgggctcccttggcttcttgggtcactggctggttcaatattgtcggacagtgggcttgcacgacgagcgtggatttctcgctggcgcagcttctccaggtgatcatcttgcttgccacaggaggcgccaacggcggcggctacatggcgtccaagtacgtcgtgttggccatctactctgtcatcctcatcctgcacggtctcatcaacagccttcccatacactggctctcctggtttggtcaacttggagctttctggaatgttgcaggtacagtcgactcaacgtcccgaccgtttcttcagatattcagtctgaacatttacatcatcagatcatctgatcgtgatttgatctttgttctgtttgtctgtatcaacacacgatccaggtgtgtttgcgctgacgatcttgatcccatcggttgccaaggaaagggcgagcccagagttcatctttacccatttcaacacagaaaacggcatgggcatccaccagaaggcctacattctagctgtggggttgctgatgagccagtactctgtaatcggctacgatacatctgcacacatggtaataaatctgattgttga</cdnaseq>

Protein Sequence

<aaseq>MSRSGVVAMDAAGADADQARLHQLGYRQELKRGLSLVSNFAFSF SIISVLTGVTTTYGTGLRYGGPVSMTLGWLVVSAFNGCVALSMAEICSAYPTSGGLYY WSAKLAGKEWAPLASWVTGWFNIVGQWACTTSVDFSLAQLLQVIILLATGGANGGGYM ASKYVVLAIYSVILILHGLINSLPIHWLSWFGQLGAFWNVAGTVDSTSRPFLQIFSLN IYIIRSSDRDLIFVLFVCINTRSRCVCADDLDPIGCQGKGEPRVHLYPFQHRKRHGHP PEGLHSSCGVADEPVLCNRLRYICTHGNKSDC</aaseq>

Gene Sequence

<dnaseqindica>1065..1607#619..637#252..512#43..146#ggagatatcatagagaaaagtagtgagcagacaccgacggcgatgtctcgctccggcgtggtggccatggacgccgccggcgccgatgcagaccaagcccggctgcaccagctgggctacaggcaagagctcaagcgtggcctctcgtatgtgcttcttcttcccttcttttaccacacttcattgcgatcatttttcaccaaattaagcttgtgagtgttaatttggcatatattgcaatcctttgttagccttgtttccaacttcgccttctccttctccatcatctccgtgctgacgggcgtcacgacgacgtacggcacggggctgcgctacggcgggccagtgtccatgacgctgggttggctggtggtgtccgccttcaacggctgcgtcgccctgtccatggccgagatctgctccgcctacccgacctccggtggcctctactactggagcgccaagctggccggcaaggaatgggctcccttggcttcttgggtcactggctggtgtgttcttcgcgtcctagcttaatttatctctcatgctttaatttaatcgttaacatgttttaaatatggaatccgcttaatccttttgtcttctgttttacaggttcaatattgtcggacaggtacgtgcattcaaactccatgagttatgtagaagtttataaaaaaatatagtagtattttcagtacaaaacaaatctattataaaatatattaaatggtacatttagtgagattaatttgatttgtagacgttgctaaaattcttataaatttaaaagtttaacttagaaaatagacaaaacgattaataatatgaaatggaggaagtaattaatgagccatgatttttgaaagtgctttcaaatatgaatataattttattcctttttttttctcaatatacctttggactaattgttgttcaaacttcacgatttcttaaaaataaataaaaaaagtacattttgcactctcgaattgtttccagaaagcgcagaaatctctgacgctccaatcgctcgttaactgctcctccactcatcccagtgggcttgcacgacgagcgtggatttctcgctggcgcagcttctccaggtgatcatcttgcttgccacaggaggcgccaacggcggcggctacatggcgtccaagtacgtcgtgttggccatctactctgtcatcctcatcctgcacggtctcatcaacagccttcccatacactggctctcctggtttggtcaacttggagctttctggaatgttgcaggtacagtcgactcaacgtcccgaccgtttcttcagatattcagtctgaacatttacatcatcagatcatctgatcgtgatttgatctttgttctgtttgtctgtatcaacacacgatccaggtgtgtttgcgctgacgatcttgatcccatcggttgccaaggaaagggcgagcccagagttcatctttacccatttcaacacagaaaacggcatgggcatccaccagaaggcctacattctagctgtggggttgctgatgagccagtactctgtaatcggctacgatacatctgcacacatggtaataaatctgattgttgaatgtcctgaacaatcctactttctcttcgtatgcattcaactgatcgacgaatcactgaatctttttgtctgcacattcagatagaggagacgaagaacgcggattggagtgggccgatggggatcatcacgtccgtaggcctatcaaccatgttcgggtggatctacctgattgccctgacatcgatcatgaccgacataccttacctcctgaaccccagcaacgacgccggcgggtacgccatcgcgcaggccctgtacaccagcttccaccggaggtacggcaccggcgccggagcgctcgcctgcctgggtgtcatcgccgtcgccatcttcctctgcggatccgcgtgcatcaccagcaactcgaggatggggtacgcgttctcgagggacggcgcgatgccgctgtcgcgcgtgtggcaccgcgtggacagccgcgaggtgcccctcaacgtcgtctggctctccgtcgccgtggccttcgtcatggctctcacggtgaattctaagtccattgctgctgctgctgctgtaaatttctcgagctgctctgatttggttgttttctcatggcagtcgctggggagccaggtggcgttccaggcgatggtgtcggtcaccacgctggggctgtacatcgcgtacgcgctgccggtgtttttccgcgtgacgacggctcggaagtcgtttgttccggggcagtttcacctcgggcgatatgggctcatggtcggctggatggccgtggtctgggtggccaccgtcacggtgctcttctcgctgccggtggcgtacccggtggccaaggagacgttcaactacacgccggtggccgtcggtggcgtgctgctgctcagcctcgtcgcgtgggtgttccatgcccgcttctggttccaagggcctgtcaccaacgttgacgcgtaaaacgtaccctgaatttttgtaaatttgaacgcgcgtaccctgatttgataaatttcaatttgaagcgtatttgggtttgacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0945600, RefSeq:Os01g0945600