Os01g0948900

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Revision as of 05:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0948900| Description = Ankyrin repeat containing protein| Version = NM_001051931.1 GI:115442232 GeneID:4325758| Length = 2105 bp| Definiti...")
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Gene Name

Os01g0948900

Description

Ankyrin repeat containing protein

Version

NM_001051931.1 GI:115442232 GeneID:4325758

Length

2105 bp

Definition

Oryza sativa Japonica Group Os01g0948900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43536242..43538346

Sequence Coding Region

43536333..43537346

Expression

GEO Profiles:Os01g0948900

Genome Context

<gbrowseImage1> name=NC_008394:43536242..43538346 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43536242..43538346 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgtgttgatggatgtgtgcagaagcagctggcaggcatggtggagaaggcgtcgatcgaggacgtgatgaaggtgcttatggcgtcgaggaagcaggacctgcaccagctgtggacaacgtgctcccacctcgtcgccaagtcggggctcccgccggaggtgctcgccaagcacctccccatcgacgtcgtcgccaagatcgacgagctccgcctcaagtccatgtcgcgccgctcgccgttcctctcgcaccaccaccaccacccgcacgcggccgccgccggcatcgaggcgtcgtcggcggccgagctcgacgaccaccacaagatccgccgcatgcgccgcgcgctcgactcctccgacgtcgagctcgtcaagctcatggtgatgggggaggggctcaacctcgacgacgccctcgcgctgcactacgccgtcgagaactgcagccgggaggtggtcaaggcgctgctggagctcggcgccgccgacgtcaaccacccggcgggccccgccgggaagacgccgctgcacgtcgcggcggagatggtgtgcccggacatggtggccgtgctgctcgaccaccacgccgaccccaacgtccgcaccgtcgacggcgtcacgccgctcgacatcctccgcacgctcacctccgacttcctcttcaagggcgccgtgcccggcctggcgcacatcgagcccaacaagctccgcctctgcctggagctcgtgcagtcggcggccatggtgatgtcccgggaggacgcccagaccgccgcggtcaatgcggcgcccatctacggcgagtcccccggcggcggcggcggcggtggcgtgtacaatgccagtggcaccagctcgagcatggtgaacctgagcttggacaacaggatggtgtacctgaacctggggatggacgcgcagttcgggaagatgaacgacggtggcgacggcgacgacggcgggagcagagggccatcgtcgttgttctccccacatggcttcccctga</cdnaseq>

Protein Sequence

<aaseq>MCVDGCVQKQLAGMVEKASIEDVMKVLMASRKQDLHQLWTTCSH LVAKSGLPPEVLAKHLPIDVVAKIDELRLKSMSRRSPFLSHHHHHPHAAAAGIEASSA AELDDHHKIRRMRRALDSSDVELVKLMVMGEGLNLDDALALHYAVENCSREVVKALLE LGAADVNHPAGPAGKTPLHVAAEMVCPDMVAVLLDHHADPNVRTVDGVTPLDILRTLT SDFLFKGAVPGLAHIEPNKLRLCLELVQSAAMVMSREDAQTAAVNAAPIYGESPGGGG GGGVYNASGTSSSMVNLSLDNRMVYLNLGMDAQFGKMNDGGDGDDGGSRGPSSLFSPH GFP</aaseq>

Gene Sequence

<dnaseqindica>1001..2014#ggcgagcattctgcagcattgatttgatctctgtacccttccatatatctccaccctttttaaatgaagcgagctcgatagtggaatggtggtgagtaggaggacgagatcgcgaagaagctgctgcagtgacggcagctgctactactcgtcgtctcgtcgccgtcgtcgccgtgcgtgcgtgcgtgcgcgcgcgcggtctttctttctccatctctcgctagcttttctttgtccatccatctatctttttctccatctttctctgtccgtccattcacccatccatgtccatccatctatccgtccgtccgtccatccatgtgccaaatttgcttcctcctccctttcaacatggttcgtgctacgatgcgatctcatcatcatcatccattcattcattcattcacatctccatcgctagtagcagctagggttcgttccttccttacaaggagatttaattaatttctctttcttttctttcttcttctcctttttgtcactgttcgtgcacactggccgtcttcttcttcctccagcttgtacaaaggaagcagcagcagaagaagaagcagctgcagcttagttgaccagtagttgtaatatcgccgctcgctactgtggcagcacagcgctcagctagctagctttccgcgcggcaatgcaagtgcaggtgcaattagggattccaggatgatgaaagacgcctttttttggcggtaatttgcgatttcgggctagggtttctttccaactttttttttgttgttgttgctctccctttaatccttagccccaatcagcgccatactgttgtactctctgttcccctccttatattttatgcacagggccaatccactacggcatcggcatgcacaatcttttcttcttcctttctttctcctcttcctttatattcccccacctccatgctcgcgagctttagtgagcacagtgaattaaagcgaagcgatgtgaaaatataattgtgtacatgtgtgttgatggatgtgtgcagaagcagctggcaggcatggtggagaaggcgtcgatcgaggacgtgatgaaggtgcttatggcgtcgaggaagcaggacctgcaccagctgtggacaacgtgctcccacctcgtcgccaagtcggggctcccgccggaggtgctcgccaagcacctccccatcgacgtcgtcgccaagatcgacgagctccgcctcaagtccatgtcgcgccgctcgccgttcctctcgcaccaccaccaccacccgcacgcggccgccgccggcatcgaggcgtcgtcggcggccgagctcgacgaccaccacaagatccgccgcatgcgccgcgcgctcgactcctccgacgtcgagctcgtcaagctcatggtgatgggggaggggctcaacctcgacgacgccctcgcgctgcactacgccgtcgagaactgcagccgggaggtggtcaaggcgctgctggagctcggcgccgccgacgtcaaccacccggcgggccccgccgggaagacgccgctgcacgtcgcggcggagatggtgtgcccggacatggtggccgtgctgctcgaccaccacgccgaccccaacgtccgcaccgtcgacggcgtcacgccgctcgacatcctccgcacgctcacctccgacttcctcttcaagggcgccgtgcccggcctggcgcacatcgagcccaacaagctccgcctctgcctggagctcgtgcagtcggcggccatggtgatgtcccgggaggacgcccagaccgccgcggtcaatgcggcgcccatctacggcgagtcccccggcggcggcggcggcggtggcgtgtacaatgccagtggcaccagctcgagcatggtgaacctgagcttggacaacaggatggtgtacctgaacctggggatggacgcgcagttcgggaagatgaacgacggtggcgacggcgacgacggcgggagcagagggccatcgtcgttgttctccccacatggcttcccctgacgacgaaagggggtgtggccgcttctgctctactatctccttgtaagcttagaactaattaattacatgttatttatatccacattacagg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0948900, RefSeq:Os01g0948900