Os01g0951400

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Revision as of 05:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0951400| Description = Similar to Uridine 5'-monophosphate synthase (UMP synthase) [Includes: Orotate phosphoribosyltransferase (EC 2.4.2.10)...")
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Gene Name

Os01g0951400

Description

Similar to Uridine 5'-monophosphate synthase (UMP synthase) [Includes: Orotate phosphoribosyltransferase (EC 2.4.2.10) (OPRtase)

Version

NM_001051948.2 GI:297598332 GeneID:4325740

Length

3412 bp

Definition

Oryza sativa Japonica Group Os01g0951400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43687671..43691082

Sequence Coding Region

43687673..43687791,43687947..43688397,43689189..43689272,43689819..43689901,43689989..43690076
,43690224..43690478,43690763..43690891

Expression

GEO Profiles:Os01g0951400

Genome Context

<gbrowseImage1> name=NC_008394:43687671..43691082 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43687671..43691082 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcgccttcgtgctcaagtccggcatcacctccccgatctacctcgacctccgcatgctcgtcgcccacccgcgcctcctctccaccgtcgcctccctcctcggctccctcccggcgacccgccgtgctcatcgtcgaggacctcgtcaccacgggctcctccgtgctcgagaccgtcgcgccactccgcgaggtcgggctcgtcgtcgccgacgccgtcgtggtcatcgaccgcgagcagggcgggagggagaacctcgccgcgaacggggtcgcgctccactcgctcatgacgctcacggaggtgctcgccgtcctcgtgaagcgcgggaagctgggcgaggagaaggcccaggaggtgaagcgattcctcgacgcaaacaggaagatggctgtgccgggactgccggttaaaccgaaagtagttaggaaggcattttctgagagagctggattggcgacgaatccgatggggaggaagctgttcgagttgatggaggccaagcaaagcaacttgtgtgttgctgcagatgtcgggacagcaacagagctacttgatctcgccgataagattggtccagagatctgcatgttgaaaactcatgtggatatcttgtctgattttacaccggattttggccacaagctccgttcgattgctgagaggcacagctttttgatatttgaagaccgcaagtttgcagacattggaaacacagtaactatgcaatatgaaggaggaatattccgcatattagactgggctgatattgttaatgcacatatagtttctggacctggaattgtagaaggcttgaagctgaagggtctgccaaaaggaagagggttacttttgctttctgaaatgagttcagctggcaaccttgctcatggagattacactgctgcagccgtgaagattgctgagcaacattctgatattgtaattggatttatatcagtaaatcctgcatcttggtcagtgacgccgtcaagtccagcgttcatccatgctactcctggagttcagttggttgctgggggagactcgcttggtcaacagtacaacactccttactctgtcataaacgacagaggcagcgacataattatagtcggtcgtgggattataagggcgaacaatcctgctgagaccgcgagagagtaccgcatccaaggatggcatgcttaccaatccagcttatcatga</cdnaseq>

Protein Sequence

<aaseq>APSCSSPASPPRSTSTSACSSPTRASSPPSPPSSAPSRRPAVLI VEDLVTTGSSVLETVAPLREVGLVVADAVVVIDREQGGRENLAANGVALHSLMTLTEV LAVLVKRGKLGEEKAQEVKRFLDANRKMAVPGLPVKPKVVRKAFSERAGLATNPMGRK LFELMEAKQSNLCVAADVGTATELLDLADKIGPEICMLKTHVDILSDFTPDFGHKLRS IAERHSFLIFEDRKFADIGNTVTMQYEGGIFRILDWADIVNAHIVSGPGIVEGLKLKG LPKGRGLLLLSEMSSAGNLAHGDYTAAAVKIAEQHSDIVIGFISVNPASWSVTPSSPA FIHATPGVQLVAGGDSLGQQYNTPYSVINDRGSDIIIVGRGIIRANNPAETAREYRIQ GWHAYQSSLS</aaseq>

Gene Sequence

<dnaseqindica>3..121#277..727#1519..1602#2149..2231#2319..2406#2554..2808#3093..3221#cggcgccttcgtgctcaagtccggcatcacctccccgatctacctcgacctccgcatgctcgtcgcccacccgcgcctcctctccaccgtcgcctccctcctcggctccctcccggcgacccgcccctacgacctcctctgcggcgtcccctacaccgcgctccccatcgcctccgtcctctccgccgccgcctccgtccccatgctcctccgccgctaccacgtcacgccgcacgccgccgccgaatgcctcgacgggtccttccgcgccggggacgccgtgctcatcgtcgaggacctcgtcaccacgggctcctccgtgctcgagaccgtcgcgccactccgcgaggtcgggctcgtcgtcgccgacgccgtcgtggtcatcgaccgcgagcagggcgggagggagaacctcgccgcgaacggggtcgcgctccactcgctcatgacgctcacggaggtgctcgccgtcctcgtgaagcgcgggaagctgggcgaggagaaggcccaggaggtgaagcgattcctcgacgcaaacaggaagatggctgtgccgggactgccggttaaaccgaaagtagttaggaaggcattttctgagagagctggattggcgacgaatccgatggggaggaagctgttcgagttgatggaggccaagcaaagcaacttgtgtgttgctgcagatgtcgggacagcaacagagctacttgatctcgccgataaggtatactataagataatgaattgtgtagatgtttggtaaactttagaacttaacagtcaggaagtcaatttctcctttttaggctattaagaatgggtaattttatgataggtgtatattaggatgatatcggtctacttcagtactattccgagttaggtaaaaggcagatttggggctgtgtgaattcctcccaatttatggtgcttgtttatgccttatgaaatgtttggttatgttaggatgatattcttctacttcagtattattccctgagtaaggtaaaaggcagatttggggttgcgtgaattcctcctgatttatggtgcttgtagccttggaaatgtttggttatgtttagtcatgtgaaactacaatccttgatagatgattctgtgaacaaattgatttgttattgtcgtattattcctttttatatagaccagtttcttagtttcatacttttttgccatcacatcttctctttctcttacatattttctatgcttagatgatgcagtatatctttcacatctagtgttgtgaatagagtggtctaatatacagtcattgtgtgggtgcagtttcttcactaagatggcatagatctaccttttcactattttactgaatcccatttgatacatttgcatcgtctttctatatattatgaggtaagagcatattgattttgtcctggttcttttcgtttttctttttggttcattagtttgttattgctaagtgaacccttttaatctgtttaacttagtgctccaattcttatgtagattggtccagagatctgcatgttgaaaactcatgtggatatcttgtctgattttacaccggattttggccacaagctccgttcggtatgttcacttatgacttgattgtccttttattttcaccatcctttggtattagtaatacttgtcctgagtagtttcatactattgcagaactccggatagagatgtaaaattggagtttgttttcttggaatcaagtgtgggatttttacccactactcttttaaaagtatatttatgctttttgcccatgattatggattgtcatgcccatcagtatagaatgtcttctttcatgctgttttcatatgggacatgctttattttttgcatttagtaggcgtatgcttattggatttattctgtgcacccaccataatgccttttgtgttttgggtacactaggcattcgaaggcaatcagctctgtttactatcagtgcttttttttaatgaattactagagctcatttgtatatatcattatatcagtgtagtattggctattcgtgatgctaaaagctactggcataaaaagctactggcatagcttagttttgatgtgtttcatcttatatttaatttgttcttaaaattttacttgaagattgctgagaggcacagctttttgatatttgaagaccgcaagtttgcagacattggaaacacagtaactatgcaatatgaagggtgagaaaagtctatttttgactgtatatataagttcatttctgttatgcatacacaatatagttaatgtcttttgtgttggttcagaggaatattccgcatattagactgggctgatattgttaatgcacatatagtttctggacctggaattgtagaaggcttgaagctgaaggtatgctatttacgtagtgccatgccctatgtgatcaacgatgagttaaaaaaaaacaaatcagaaattcaatgttgctgctgctaatagcttttgactgttgtagtgccggctactgaaggttaatgttttgttcgtttactgaagggtctgccaaaaggaagagggttacttttgctttctgaaatgagttcagctggcaaccttgctcatggagattacactgctgcagccgtgaagattgctgagcaacattctgatattgtaattggatttatatcagtaaatcctgcatcttggtcagtgacgccgtcaagtccagcgttcatccatgctactcctggagttcagttggttgctgggggagactcgcttggtcaacagtacaacactccttactctgtgagttaaaacattggcaatacataccctttttgctgactgatattctgttgtcttcacaccttactgcttttaagtttttttaatggataataactaatgcagtctgcttaagttagcaattcgagattaccagtattcatcttctttgaactatagttttcatccagtttcagttaataaacttcatccattctgatagcttttgggcatttttcttctgatgcagtctgctgctctgcttatctgatgatatagatcgcttacttttctgtgaaatacaggtcataaacgacagaggcagcgacataattatagtcggtcgtgggattataagggcgaacaatcctgctgagaccgcgagagagtaccgcatccaaggatggcatgcttaccaatccagcttatcatgagaatgctgtaaggtctctcccattctgtaacacgaatgtaagggcattcaggcgattgactgacgcaataaaagagagtatacgcatgctctatcatcgctgtggttcgtaattcacatgccctatattgacacgcactatcccagcaacaatttcgtttatgtgatggtaaataaataaagtttgctccg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0951400, RefSeq:Os01g0951400